RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 NRBP1Q9UHY1 535 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 SMC3Q9UQE7 1217 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 SNX14Q9Y5W7 946 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 AKAP12Q02952 1782 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 FAM83GA6ND36 823 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 NEMFO60524 1076 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 CDK11BP21127 795 aaKnown RBP7.5□□□□□ -1.21
NXF3-201ENST00000395065 CCT4P50991 539 aaKnown RBP7.5□□□□□ -1.21
NXF3-201ENST00000395065 LUZP1Q86V48 1076 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 UNC5CLQ8IV45 518 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.5□□□□□ -1.21
NXF3-201ENST00000395065 TSPYL1Q9H0U9 437 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 ERBB3P21860 1342 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 VGLL3A8MV65 326 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 SGSM2O43147 1006 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 CAVIN2O95810 425 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 GNAI2P04899 355 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 ATP8B2P98198 1209 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 TPD52L1Q16890 204 aaPredicted RBP7.49□□□□□ -1.21
NXF3-201ENST00000395065 RNF20Q5VTR2 975 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 TSHZ3Q63HK5 1081 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 FBXO38Q6PIJ6 1188 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 SARM1Q6SZW1 724 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 TTC6Q86TZ1 520 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 LRRC8AQ8IWT6 810 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 RTF1Q92541 710 aaKnown RBP7.49□□□□□ -1.21
NXF3-201ENST00000395065 RILPL2Q969X0 211 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 NUP62CLQ9H1M0 184 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 ZNF215Q9UL58 517 aaPredicted RBP7.49□□□□□ -1.21
NXF3-201ENST00000395065 EXOC6BQ9Y2D4 811 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 C3P01024 1663 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 ARHGEF10O15013 1369 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 METP08581 1390 aa7.49□□□□□ -1.21
NXF3-201ENST00000395065 TRIM6-TRIM34B2RNG4 842 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 H2AFXP16104 143 aaPredicted RBP7.48□□□□□ -1.21
NXF3-201ENST00000395065 GJB2P29033 226 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 RASEFQ8IZ41 740 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 KCNB2Q92953 911 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 ZSCAN31Q96LW9 406 aaPredicted RBP7.48□□□□□ -1.21
NXF3-201ENST00000395065 LSG1Q9H089 658 aaKnown RBP7.48□□□□□ -1.21
NXF3-201ENST00000395065 SH2B1Q9NRF2 756 aaPredicted RBP7.48□□□□□ -1.21
NXF3-201ENST00000395065 ZNF446Q9NWS9 450 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 HYPKQ9NX55 129 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 TTC21AQ8NDW8 1320 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 CPS1P31327 1500 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 UBR1Q8IWV7 1749 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 EDC4Q6P2E9 1401 aaKnown RBP7.48□□□□□ -1.21
NXF3-201ENST00000395065 LIG1P18858 919 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 DCTN1Q14203 1278 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 BMS1Q14692 1282 aaKnown RBP7.48□□□□□ -1.21
NXF3-201ENST00000395065 CCDC144BQ3MJ40 725 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 ANO6Q4KMQ2 910 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 VPS53Q5VIR6 699 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 NME9Q86XW9 330 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 CCDC144CPQ8IYA2 1237 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 CERKQ8TCT0 537 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 TM6SF1Q9BZW5 370 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 TRIM5Q9C035 493 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 L2HGDHQ9H9P8 463 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 DDX19AQ9NUU7 478 aaKnown RBP7.48□□□□□ -1.21
NXF3-201ENST00000395065 ZRANB1Q9UGI0 708 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 NCKAP5LQ9HCH0 1330 aa7.48□□□□□ -1.21
NXF3-201ENST00000395065 ADGRL3Q9HAR2 1447 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 KIF2AO00139 706 aaPredicted RBP7.47□□□□□ -1.21
NXF3-201ENST00000395065 SLU7O95391 586 aaKnown RBP7.47□□□□□ -1.21
NXF3-201ENST00000395065 LARGE1O95461 756 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 KRT85P78386 507 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 ST3GAL1Q11201 340 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 PTPN14Q15678 1187 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 PAXIP1Q6ZW49 1069 aaPredicted RBP7.47□□□□□ -1.21
NXF3-201ENST00000395065 TXNDC2Q86VQ3 553 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.47□□□□□ -1.21
NXF3-201ENST00000395065 CLIP2Q9UDT6 1046 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 ATF5Q9Y2D1 282 aaPredicted RBP7.47□□□□□ -1.21
NXF3-201ENST00000395065 CRYBG1Q9Y4K1 1723 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 TTC21BQ7Z4L5 1316 aa7.47□□□□□ -1.21
NXF3-201ENST00000395065 CHD2O14647 1828 aaKnown RBP7.47□□□□□ -1.21
NXF3-201ENST00000395065 PNMA6EA0A0J9YXQ4 647 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 WASLO00401 505 aaPredicted RBP7.46□□□□□ -1.21
NXF3-201ENST00000395065 ZNF165P49910 485 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 HNRNPH2P55795 449 aaKnown RBP7.46□□□□□ -1.21
NXF3-201ENST00000395065 IQCB1Q15051 598 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 ELF2Q15723 593 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 DRC7Q8IY82 874 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 NOL10Q9BSC4 688 aaKnown RBP7.46□□□□□ -1.21
NXF3-201ENST00000395065 TNMDQ9H2S6 317 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 CLSTN2Q9H4D0 955 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 ZSWIM6Q9HCJ5 1215 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 DACT1Q9NYF0 836 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 FHOD1Q9Y613 1164 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 NPHP3Q7Z494 1330 aa7.46□□□□□ -1.21
NXF3-201ENST00000395065 CRB1P82279 1406 aa7.46□□□□□ -1.22
NXF3-201ENST00000395065 NRKQ7Z2Y5 1582 aa7.46□□□□□ -1.22
NXF3-201ENST00000395065 USP27XA6NNY8 438 aa7.46□□□□□ -1.22
NXF3-201ENST00000395065 GNAI3P08754 354 aa7.46□□□□□ -1.22
NXF3-201ENST00000395065 CCZ1BP86790 482 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms