RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 BRINP3Q76B58 766 aa12.65□□□□□ -0.38
HIF1A-203ENST00000394997 PPP1R42Q7Z4L9 355 aa12.65□□□□□ -0.38
HIF1A-203ENST00000394997 PI4KAP1Q8N8J0 262 aa12.65□□□□□ -0.38
HIF1A-203ENST00000394997 C4AP0C0L4 1744 aa12.65□□□□□ -0.39
HIF1A-203ENST00000394997 C4BP0C0L5 1744 aa12.65□□□□□ -0.39
HIF1A-203ENST00000394997 BTBD11A6QL63 1104 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 TTC14Q96N46 770 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-203ENST00000394997 SASH1O94885 1247 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 MX1P20591 662 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 FKBP5Q13451 457 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-203ENST00000394997 GNAI3P08754 354 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-203ENST00000394997 ZNF530Q6P9A1 599 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-203ENST00000394997 DNAAF4Q8WXU2 420 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
HIF1A-203ENST00000394997 EPHA10Q5JZY3 1008 aa12.63□□□□□ -0.39
HIF1A-203ENST00000394997 LRRCC1Q9C099 1032 aa12.63□□□□□ -0.39
HIF1A-203ENST00000394997 LSG1Q9H089 658 aaKnown RBP12.63□□□□□ -0.39
HIF1A-203ENST00000394997 EPB41L2O43491 1005 aaKnown RBP12.63□□□□□ -0.39
HIF1A-203ENST00000394997 A0A0G2JS52 829 aa12.63□□□□□ -0.39
HIF1A-203ENST00000394997 MYH14Q7Z406 1995 aaKnown RBP12.62□□□□□ -0.39
HIF1A-203ENST00000394997 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
HIF1A-203ENST00000394997 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
HIF1A-203ENST00000394997 GAS2L3Q86XJ1 694 aa12.62□□□□□ -0.39
HIF1A-203ENST00000394997 TPRNQ4KMQ1 711 aa12.62□□□□□ -0.39
HIF1A-203ENST00000394997 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
HIF1A-203ENST00000394997 RABL6Q3YEC7 729 aaPredicted RBP12.62□□□□□ -0.39
HIF1A-203ENST00000394997 SLC4A10Q6U841 1118 aa12.62□□□□□ -0.39
HIF1A-203ENST00000394997 PLEKHO1Q53GL0 409 aaPredicted RBP12.61□□□□□ -0.39
HIF1A-203ENST00000394997 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
HIF1A-203ENST00000394997 RHPN1Q8TCX5 695 aa12.61□□□□□ -0.39
HIF1A-203ENST00000394997 SUCLG2Q96I99 432 aa12.61□□□□□ -0.39
HIF1A-203ENST00000394997 HSPA4P34932 840 aa12.61□□□□□ -0.39
HIF1A-203ENST00000394997 ZGPATQ8N5A5 531 aaKnown RBP12.61□□□□□ -0.39
HIF1A-203ENST00000394997 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
HIF1A-203ENST00000394997 RABEP1Q15276 862 aa12.6□□□□□ -0.39
HIF1A-203ENST00000394997 CWF19L2Q2TBE0 894 aaKnown RBP12.6□□□□□ -0.39
HIF1A-203ENST00000394997 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
HIF1A-203ENST00000394997 DBF4Q9UBU7 674 aaPredicted RBP12.6□□□□□ -0.39
HIF1A-203ENST00000394997 ALDH1L1O75891 902 aa12.6□□□□□ -0.39
HIF1A-203ENST00000394997 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
HIF1A-203ENST00000394997 SSFA2P28290 1259 aa12.6□□□□□ -0.39
HIF1A-203ENST00000394997 NBPF14Q5TI25 921 aa12.6□□□□□ -0.39
HIF1A-203ENST00000394997 NBPF10Q6P3W6 841 aaKnown RBP12.6□□□□□ -0.39
HIF1A-203ENST00000394997 NBPF15Q8N660 670 aa12.6□□□□□ -0.39
HIF1A-203ENST00000394997 MAP3K2Q9Y2U5 619 aa12.6□□□□□ -0.39
HIF1A-203ENST00000394997 STK31Q9BXU1 1019 aa12.59□□□□□ -0.39
HIF1A-203ENST00000394997 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
HIF1A-203ENST00000394997 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
HIF1A-203ENST00000394997 ERC2O15083 957 aa12.59□□□□□ -0.39
HIF1A-203ENST00000394997 RAB11FIP3O75154 756 aa12.59□□□□□ -0.39
HIF1A-203ENST00000394997 XRCC6P12956 609 aaKnown RBP eCLIP12.59□□□□□ -0.39
HIF1A-203ENST00000394997 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
HIF1A-203ENST00000394997 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.39
HIF1A-203ENST00000394997 SGSM2O43147 1006 aa12.58□□□□□ -0.39
HIF1A-203ENST00000394997 MSNP26038 577 aaKnown RBP12.58□□□□□ -0.39
HIF1A-203ENST00000394997 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.39
HIF1A-203ENST00000394997 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.39
HIF1A-203ENST00000394997 RAD50Q92878 1312 aa12.58□□□□□ -0.4
HIF1A-203ENST00000394997 COL24A1Q17RW2 1714 aa12.58□□□□□ -0.4
HIF1A-203ENST00000394997 HSP90AB1P08238 724 aaKnown RBP12.58□□□□□ -0.4
HIF1A-203ENST00000394997 CHD4Q14839 1912 aa12.58□□□□□ -0.4
HIF1A-203ENST00000394997 HSCBQ8IWL3 235 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
HIF1A-203ENST00000394997 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 WDR17Q8IZU2 1322 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 ANAPC15P60006 121 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 CHAMP1Q96JM3 812 aa12.57□□□□□ -0.4
HIF1A-203ENST00000394997 EP400Q96L91 3159 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 KIAA1551Q9HCM1 1747 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 HMMRO75330 724 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
HIF1A-203ENST00000394997 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 SBF2Q86WG5 1849 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 BICC1Q9H694 974 aaKnown RBP12.56□□□□□ -0.4
HIF1A-203ENST00000394997 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
HIF1A-203ENST00000394997 FOXO4P98177 505 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 FAM13BQ9NYF5 915 aa12.56□□□□□ -0.4
HIF1A-203ENST00000394997 SCN7AQ01118 1682 aa12.55□□□□□ -0.4
HIF1A-203ENST00000394997 GOLGA6L22H0YM25 854 aa12.55□□□□□ -0.4
HIF1A-203ENST00000394997 PA2G4Q9UQ80 394 aaKnown RBP12.55□□□□□ -0.4
HIF1A-203ENST00000394997 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
HIF1A-203ENST00000394997 TRAK2O60296 914 aa12.55□□□□□ -0.4
HIF1A-203ENST00000394997 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
HIF1A-203ENST00000394997 PTMAP06454 111 aaKnown RBP12.55□□□□□ -0.4
HIF1A-203ENST00000394997 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
HIF1A-203ENST00000394997 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
HIF1A-203ENST00000394997 NSFL1CQ9UNZ2 370 aaKnown RBP12.55□□□□□ -0.4
HIF1A-203ENST00000394997 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
HIF1A-203ENST00000394997 GPT2Q8TD30 523 aa12.55□□□□□ -0.4
HIF1A-203ENST00000394997 GCKRQ14397 625 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms