RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 UBA5Q9GZZ9 404 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 HDAC9Q9UKV0 1011 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 KIF1BPQ96EK5 621 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 MYCNP04198 464 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-205ENST00000394768 ATP2A2P16615 1042 aaKnown RBP8.55□□□□□ -1.04
SYNE2-205ENST00000394768 CCDC155Q8N6L0 562 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 SPC24Q8NBT2 197 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 CA8P35219 290 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 DAAM2Q86T65 1068 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 RPAP2Q8IXW5 612 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-205ENST00000394768 CABP2Q9NPB3 220 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 MAP7D1Q3KQU3 841 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 SIL1Q9H173 461 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 GGNBP2Q9H3C7 697 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 CEP83Q9Y592 693 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 KIAA0753Q2KHM9 967 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 BICD1Q96G01 975 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 SAMM50Q9Y512 469 aa8.55□□□□□ -1.04
SYNE2-205ENST00000394768 IBSPP21815 317 aaPredicted RBP8.54□□□□□ -1.04
SYNE2-205ENST00000394768 OGFOD1Q8N543 542 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 ANKS4BQ8N8V4 417 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 CCDC110Q8TBZ0 833 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 CCDC77Q9BR77 488 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 KIF5AQ12840 1032 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 NOL3O60936 208 aaKnown RBP8.54□□□□□ -1.04
SYNE2-205ENST00000394768 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 SSRP1Q08945 709 aaKnown RBP8.54□□□□□ -1.04
SYNE2-205ENST00000394768 C8orf76Q96K31 380 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
SYNE2-205ENST00000394768 TAF12Q16514 161 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 CTAGE1Q96RT6 745 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 TOP1P11387 765 aaKnown RBP8.54□□□□□ -1.04
SYNE2-205ENST00000394768 ALDH3A1P30838 453 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 TDRD12Q587J7 1177 aaKnown RBP8.54□□□□□ -1.04
SYNE2-205ENST00000394768 ATAD2BQ9ULI0 1458 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 HYPKQ9NX55 129 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 ZBTB24O43167 697 aaPredicted RBP8.54□□□□□ -1.04
SYNE2-205ENST00000394768 TCP11L2Q8N4U5 519 aa8.54□□□□□ -1.04
SYNE2-205ENST00000394768 STK3Q13188 491 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 PPP1R42Q7Z4L9 355 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 ARL1P40616 181 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-205ENST00000394768 SMC6Q96SB8 1091 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 NCAPGQ9BPX3 1015 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 BRDTQ58F21 947 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-205ENST00000394768 USP25Q9UHP3 1055 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 KDM4AO75164 1064 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 FAM177A1Q8N128 213 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-205ENST00000394768 CDK19Q9BWU1 502 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 CACYBPQ9HB71 228 aaKnown RBP8.53□□□□□ -1.04
SYNE2-205ENST00000394768 CCDC6Q16204 474 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 JAKMIP1Q96N16 626 aaKnown RBP8.53□□□□□ -1.04
SYNE2-205ENST00000394768 CCDC171Q6TFL3 1326 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 NBPF7P0C2Y1 421 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-205ENST00000394768 SWAP70Q9UH65 585 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 FCHSD2O94868 740 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 SLC8A3P57103 927 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 PTPN14Q15678 1187 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 PANK1Q8TE04 598 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 TNPO1Q92973 898 aaKnown RBP8.53□□□□□ -1.04
SYNE2-205ENST00000394768 SELENOOQ9BVL4 669 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 FGD5Q6ZNL6 1462 aa8.53□□□□□ -1.04
SYNE2-205ENST00000394768 PRAM1Q96QH2 718 aa8.52□□□□□ -1.04
SYNE2-205ENST00000394768 TXNDC16Q9P2K2 825 aa8.52□□□□□ -1.04
SYNE2-205ENST00000394768 KIF14Q15058 1648 aa8.52□□□□□ -1.04
SYNE2-205ENST00000394768 A0A1W2PRG0 241 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 SULT6B1Q6IMI4 303 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 ZNF213O14771 459 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 PIP4K2BP78356 416 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 ZMYND15Q9H091 742 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 CCDC40Q4G0X9 1142 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 ZNF354CQ86Y25 554 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 NFE2L2Q16236 605 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 TMTC2Q8N394 836 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 CASKIN1Q8WXD9 1431 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 KRT13P13646 458 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 RFX1P22670 979 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 LMBR1Q8WVP7 490 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 USH1CQ9Y6N9 552 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 ABCC11Q96J66 1382 aa8.52□□□□□ -1.05
SYNE2-205ENST00000394768 PRKCSHP14314 528 aaPredicted RBP8.52□□□□□ -1.05
SYNE2-205ENST00000394768 KAT14Q9H8E8 782 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 TMOD4Q9NZQ9 345 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 MINDY4BA8MYZ0 360 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 GNAQP50148 359 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 C9orf84Q5VXU9 1444 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
SYNE2-205ENST00000394768 NLRP5P59047 1200 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 CWC27Q6UX04 472 aaKnown RBP8.51□□□□□ -1.05
SYNE2-205ENST00000394768 BICDL1Q6ZP65 573 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 NOB1Q9ULX3 412 aaKnown RBP8.51□□□□□ -1.05
SYNE2-205ENST00000394768 OPA1O60313 960 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 SEPT6Q14141 434 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 MAP7Q14244 749 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 HLTFQ14527 1009 aaKnown RBP eCLIP8.51□□□□□ -1.05
SYNE2-205ENST00000394768 MVPQ14764 893 aaKnown RBP8.51□□□□□ -1.05
SYNE2-205ENST00000394768 OTUD6BQ8N6M0 293 aa8.51□□□□□ -1.05
SYNE2-205ENST00000394768 CCDC94Q9BW85 323 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-205ENST00000394768 MTIF2P46199 727 aaKnown RBP8.51□□□□□ -1.05
SYNE2-205ENST00000394768 KIF4BQ2VIQ3 1234 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms