RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	ROBO1	Q9Y6N7	1651 aa		11.37	□□□□□ -0.59
MITF-205	ENST00000394348	PNMA6E	A0A0J9YXQ4	647 aa		11.37	□□□□□ -0.59
MITF-205	ENST00000394348	PDE1A	P54750	535 aa		11.37	□□□□□ -0.59
MITF-205	ENST00000394348	CABP4	P57796	275 aa		11.37	□□□□□ -0.59
MITF-205	ENST00000394348	PDIA6	Q15084	440 aa		11.37	□□□□□ -0.59
MITF-205	ENST00000394348	RTL5	Q5HYW3	569 aa	Predicted RBP	11.37	□□□□□ -0.59
MITF-205	ENST00000394348	LARP1	Q6PKG0	1096 aa	Known RBP	11.37	□□□□□ -0.59
MITF-205	ENST00000394348	NFATC2IP	Q8NCF5	419 aa		11.37	□□□□□ -0.59
MITF-205	ENST00000394348	MAP3K2	Q9Y2U5	619 aa		11.37	□□□□□ -0.59
MITF-205	ENST00000394348	KCP	Q6ZWJ8	1503 aa		11.36	□□□□□ -0.59
MITF-205	ENST00000394348	EPB41L2	O43491	1005 aa	Known RBP	11.36	□□□□□ -0.59
MITF-205	ENST00000394348	PROSER3	Q2NL68	480 aa		11.36	□□□□□ -0.59
MITF-205	ENST00000394348	PPP1R42	Q7Z4L9	355 aa		11.36	□□□□□ -0.59
MITF-205	ENST00000394348	IL27	Q8NEV9	243 aa		11.36	□□□□□ -0.59
MITF-205	ENST00000394348	KIF1BP	Q96EK5	621 aa		11.36	□□□□□ -0.59
MITF-205	ENST00000394348	ZNF496	Q96IT1	587 aa	Predicted RBP	11.36	□□□□□ -0.59
MITF-205	ENST00000394348	TBC1D2	Q9BYX2	928 aa		11.36	□□□□□ -0.59
MITF-205	ENST00000394348	USP42	Q9H9J4	1324 aa	Known RBP	11.35	□□□□□ -0.59
MITF-205	ENST00000394348	DISP2	A7MBM2	1401 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	LTBP4	Q8N2S1	1624 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	WNK3	Q9BYP7	1800 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	SMARCA5	O60264	1052 aa	Predicted RBP	11.35	□□□□□ -0.59
MITF-205	ENST00000394348	SDS	P20132	328 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	MX1	P20591	662 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	NEXN	Q0ZGT2	675 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	LRP10	Q7Z4F1	713 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	ERC1	Q8IUD2	1116 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.35	□□□□□ -0.59
MITF-205	ENST00000394348	PHF12	Q96QT6	1004 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	EXOC6B	Q9Y2D4	811 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	ARFGEF2	Q9Y6D5	1785 aa		11.35	□□□□□ -0.59
MITF-205	ENST00000394348	GRM8	O00222	908 aa		11.34	□□□□□ -0.59
MITF-205	ENST00000394348	SRGAP3	O43295	1099 aa		11.34	□□□□□ -0.59
MITF-205	ENST00000394348	GABBR2	O75899	941 aa		11.34	□□□□□ -0.59
MITF-205	ENST00000394348	REC8	O95072	547 aa		11.34	□□□□□ -0.59
MITF-205	ENST00000394348	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.34	□□□□□ -0.59
MITF-205	ENST00000394348	SLC39A6	Q13433	755 aa		11.34	□□□□□ -0.59
MITF-205	ENST00000394348	HSCB	Q8IWL3	235 aa		11.34	□□□□□ -0.59
MITF-205	ENST00000394348	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.34	□□□□□ -0.59
MITF-205	ENST00000394348	METTL22	Q9BUU2	404 aa	Predicted RBP	11.34	□□□□□ -0.59
MITF-205	ENST00000394348	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.34	□□□□□ -0.59
MITF-205	ENST00000394348	TOGARAM1	Q9Y4F4	1720 aa		11.34	□□□□□ -0.59
MITF-205	ENST00000394348	COL16A1	Q07092	1604 aa	Predicted RBP	11.34	□□□□□ -0.59
MITF-205	ENST00000394348	PRAMEF22	A3QJZ6	481 aa		11.33	□□□□□ -0.6
MITF-205	ENST00000394348	ANXA1	P04083	346 aa		11.33	□□□□□ -0.6
MITF-205	ENST00000394348	FAM212A	Q96EL1	285 aa		11.33	□□□□□ -0.6
MITF-205	ENST00000394348	ANTXR1	Q9H6X2	564 aa		11.33	□□□□□ -0.6
MITF-205	ENST00000394348	TTC41P	Q6P2S7	1318 aa		11.33	□□□□□ -0.6
MITF-205	ENST00000394348	NUP188	Q5SRE5	1749 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	ERC2	O15083	957 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	SURF6	O75683	361 aa	Known RBP	11.32	□□□□□ -0.6
MITF-205	ENST00000394348	SLC4A3	P48751	1232 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	EVA1C	P58658	441 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	RABEP1	Q15276	862 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	RIC3	Q7Z5B4	369 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	RHPN1	Q8TCX5	695 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	SPOCK2	Q92563	424 aa		11.32	□□□□□ -0.6
MITF-205	ENST00000394348	AFDN	P55196	1824 aa	Known RBP	11.31	□□□□□ -0.6
MITF-205	ENST00000394348	NEURL1B	A8MQ27	555 aa		11.31	□□□□□ -0.6
MITF-205	ENST00000394348	ANKRD13D	Q6ZTN6	518 aa		11.31	□□□□□ -0.6
MITF-205	ENST00000394348	PLBD2	Q8NHP8	589 aa		11.31	□□□□□ -0.6
MITF-205	ENST00000394348	XAGE3	Q8WTP9	111 aa		11.31	□□□□□ -0.6
MITF-205	ENST00000394348	KIF2C	Q99661	725 aa		11.31	□□□□□ -0.6
MITF-205	ENST00000394348	USP26	Q9BXU7	913 aa		11.31	□□□□□ -0.6
MITF-205	ENST00000394348	NRAP	Q86VF7	1730 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	APBB1	O00213	710 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	IGKV5-2	P06315	115 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	GCKR	Q14397	625 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	NBR1	Q14596	966 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	COPS6	Q7L5N1	327 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	VSIG10	Q8N0Z9	540 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	IL17RA	Q96F46	866 aa		11.3	□□□□□ -0.6
MITF-205	ENST00000394348	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.3	□□□□□ -0.6
MITF-205	ENST00000394348	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.3	□□□□□ -0.6
MITF-205	ENST00000394348	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.3	□□□□□ -0.6
MITF-205	ENST00000394348	NFKBIB	Q15653	356 aa		11.29	□□□□□ -0.6
MITF-205	ENST00000394348	GPATCH3	Q96I76	525 aa		11.29	□□□□□ -0.6
MITF-205	ENST00000394348	SUCLG2	Q96I99	432 aa		11.29	□□□□□ -0.6
MITF-205	ENST00000394348	USP16	Q9Y5T5	823 aa		11.29	□□□□□ -0.6
MITF-205	ENST00000394348	NWD2	Q9ULI1	1742 aa		11.29	□□□□□ -0.6
MITF-205	ENST00000394348	AK9	Q5TCS8	1911 aa		11.29	□□□□□ -0.6
MITF-205	ENST00000394348	GLRX3	O76003	335 aa	Known RBP	11.28	□□□□□ -0.6
MITF-205	ENST00000394348	ANAPC15	P60006	121 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	CWF19L2	Q2TBE0	894 aa	Known RBP	11.28	□□□□□ -0.6
MITF-205	ENST00000394348	RABL6	Q3YEC7	729 aa	Predicted RBP	11.28	□□□□□ -0.6
MITF-205	ENST00000394348	DCAF8	Q5TAQ9	597 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	CLASRP	Q8N2M8	674 aa	Known RBP	11.28	□□□□□ -0.6
MITF-205	ENST00000394348	PI4K2B	Q8TCG2	481 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	KAZALD1	Q96I82	304 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	ESYT1	Q9BSJ8	1104 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	STRN4	Q9NRL3	753 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	CHMP5	Q9NZZ3	219 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	PHLPP1	O60346	1717 aa		11.28	□□□□□ -0.6
MITF-205	ENST00000394348	MYL6B	P14649	208 aa		11.27	□□□□□ -0.61
MITF-205	ENST00000394348	MCC	P23508	829 aa		11.27	□□□□□ -0.61
MITF-205	ENST00000394348	CHML	P26374	656 aa		11.27	□□□□□ -0.61
MITF-205	ENST00000394348	AIMP1	Q12904	312 aa	Known RBP	11.27	□□□□□ -0.61
MITF-205	ENST00000394348	CNTROB	Q8N137	903 aa		11.27	□□□□□ -0.61
MITF-205	ENST00000394348	MYD88	Q99836	296 aa		11.27	□□□□□ -0.61
MITF-205	ENST00000394348	BTG4	Q9NY30	223 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms