RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 WWC1Q8IX03 1113 aa21.03■□□□□ 0.96
TGFA-202ENST00000394241 MIS18AQ9NYP9 233 aa21.03■□□□□ 0.96
TGFA-202ENST00000394241 HEG1Q9ULI3 1381 aa21.02■□□□□ 0.96
TGFA-202ENST00000394241 NRXN2Q9P2S2 1712 aa21.02■□□□□ 0.96
TGFA-202ENST00000394241 KCNQ3O43525 872 aa21.02■□□□□ 0.96
TGFA-202ENST00000394241 USPL1Q5W0Q7 1092 aa21.02■□□□□ 0.96
TGFA-202ENST00000394241 DPY19L2Q6NUT2 758 aa21.02■□□□□ 0.96
TGFA-202ENST00000394241 VSIG10Q8N0Z9 540 aa21.02■□□□□ 0.96
TGFA-202ENST00000394241 TTLL6Q8N841 843 aa21.02■□□□□ 0.96
TGFA-202ENST00000394241 ZNF496Q96IT1 587 aaPredicted RBP21.02■□□□□ 0.96
TGFA-202ENST00000394241 LAS1LQ9Y4W2 734 aaKnown RBP21.02■□□□□ 0.96
TGFA-202ENST00000394241 FOXN1O15353 648 aa21.01■□□□□ 0.95
TGFA-202ENST00000394241 INTS5Q6P9B9 1019 aaKnown RBP21.01■□□□□ 0.95
TGFA-202ENST00000394241 IFT57Q9NWB7 429 aa21.01■□□□□ 0.95
TGFA-202ENST00000394241 LAMB4A4D0S4 1761 aa21■□□□□ 0.95
TGFA-202ENST00000394241 DICER1Q9UPY3 1922 aaKnown RBP21■□□□□ 0.95
TGFA-202ENST00000394241 NFKBIEO00221 500 aa21■□□□□ 0.95
TGFA-202ENST00000394241 CFAP44Q96MT7 982 aa21■□□□□ 0.95
TGFA-202ENST00000394241 PRDM10Q9NQV6 1147 aa21■□□□□ 0.95
TGFA-202ENST00000394241 CHL1O00533 1208 aa20.99■□□□□ 0.95
TGFA-202ENST00000394241 GNAI1P63096 354 aa20.99■□□□□ 0.95
TGFA-202ENST00000394241 NFIXQ14938 502 aa20.98■□□□□ 0.95
TGFA-202ENST00000394241 CHADLQ6NUI6 762 aa20.98■□□□□ 0.95
TGFA-202ENST00000394241 DNAJC10Q8IXB1 793 aa20.98■□□□□ 0.95
TGFA-202ENST00000394241 IL16Q14005 1332 aa20.98■□□□□ 0.95
TGFA-202ENST00000394241 EIF4A1P60842 406 aaKnown RBP20.97■□□□□ 0.95
TGFA-202ENST00000394241 C2CD5Q86YS7 1000 aa20.97■□□□□ 0.95
TGFA-202ENST00000394241 WDR63Q8IWG1 891 aa20.97■□□□□ 0.95
TGFA-202ENST00000394241 SOS1Q07889 1333 aaPredicted RBP20.97■□□□□ 0.95
TGFA-202ENST00000394241 CNTNAP1P78357 1384 aa20.97■□□□□ 0.95
TGFA-202ENST00000394241 ZNF853P0CG23 659 aa20.96■□□□□ 0.95
TGFA-202ENST00000394241 TEX13AQ9BXU3 409 aaPredicted RBP20.96■□□□□ 0.95
TGFA-202ENST00000394241 H0YIN7 160 aa20.95■□□□□ 0.94
TGFA-202ENST00000394241 SERPINB2P05120 415 aa20.95■□□□□ 0.94
TGFA-202ENST00000394241 SNRPA1P09661 255 aaKnown RBP20.95■□□□□ 0.94
TGFA-202ENST00000394241 CTCFP49711 727 aaPredicted RBP20.95■□□□□ 0.94
TGFA-202ENST00000394241 AIDAQ96BJ3 306 aa20.95■□□□□ 0.94
TGFA-202ENST00000394241 MBIPQ9NS73 344 aa20.95■□□□□ 0.94
TGFA-202ENST00000394241 NARFQ9UHQ1 456 aa20.95■□□□□ 0.94
TGFA-202ENST00000394241 FER1L6Q2WGJ9 1857 aa20.94■□□□□ 0.94
TGFA-202ENST00000394241 ERFEQ4G0M1 354 aa20.94■□□□□ 0.94
TGFA-202ENST00000394241 ZNF521Q96K83 1311 aa20.94■□□□□ 0.94
TGFA-202ENST00000394241 STARD3NLO95772 234 aa20.93■□□□□ 0.94
TGFA-202ENST00000394241 POTEIP0CG38 1075 aa20.93■□□□□ 0.94
TGFA-202ENST00000394241 POTEJP0CG39 1038 aa20.93■□□□□ 0.94
TGFA-202ENST00000394241 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
TGFA-202ENST00000394241 COL15A1P39059 1388 aa20.93■□□□□ 0.94
TGFA-202ENST00000394241 HNRNPUQ00839 825 aaKnown RBP eCLIP20.92■□□□□ 0.94
TGFA-202ENST00000394241 CARMIL3Q8ND23 1372 aa20.92■□□□□ 0.94
TGFA-202ENST00000394241 BCL2L12Q9HB09 334 aa20.91■□□□□ 0.94
TGFA-202ENST00000394241 ANKRD31Q8N7Z5 1873 aa20.9■□□□□ 0.94
TGFA-202ENST00000394241 PRAMEF22A3QJZ6 481 aa20.9■□□□□ 0.94
TGFA-202ENST00000394241 TSR2Q969E8 191 aaKnown RBP20.9■□□□□ 0.94
TGFA-202ENST00000394241 PASKQ96RG2 1323 aa20.89■□□□□ 0.93
TGFA-202ENST00000394241 FANCIQ9NVI1 1328 aa20.89■□□□□ 0.93
TGFA-202ENST00000394241 C21orf2O43822 256 aa20.89■□□□□ 0.93
TGFA-202ENST00000394241 MYH16Q9H6N6 1097 aa20.89■□□□□ 0.93
TGFA-202ENST00000394241 ZNF219Q9P2Y4 722 aaPredicted RBP20.89■□□□□ 0.93
TGFA-202ENST00000394241 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
TGFA-202ENST00000394241 DDNO94850 711 aaPredicted RBP20.88■□□□□ 0.93
TGFA-202ENST00000394241 VEGFBP49765 207 aa20.88■□□□□ 0.93
TGFA-202ENST00000394241 LBX1P52954 281 aa20.88■□□□□ 0.93
TGFA-202ENST00000394241 GOLGA2Q08379 1002 aa20.88■□□□□ 0.93
TGFA-202ENST00000394241 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
TGFA-202ENST00000394241 ZNF622Q969S3 477 aaKnown RBP eCLIP20.88■□□□□ 0.93
TGFA-202ENST00000394241 ZBTB1Q9Y2K1 713 aa20.88■□□□□ 0.93
TGFA-202ENST00000394241 HOXB7P09629 217 aa20.87■□□□□ 0.93
TGFA-202ENST00000394241 KRT24Q2M2I5 525 aa20.87■□□□□ 0.93
TGFA-202ENST00000394241 WBP1LQ9NX94 342 aa20.87■□□□□ 0.93
TGFA-202ENST00000394241 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
TGFA-202ENST00000394241 LTBP3Q9NS15 1303 aa20.86■□□□□ 0.93
TGFA-202ENST00000394241 SCN4AP35499 1836 aa20.86■□□□□ 0.93
TGFA-202ENST00000394241 E9PSI1 815 aa20.86■□□□□ 0.93
TGFA-202ENST00000394241 LDHDQ86WU2 507 aa20.86■□□□□ 0.93
TGFA-202ENST00000394241 ABHD8Q96I13 439 aa20.86■□□□□ 0.93
TGFA-202ENST00000394241 TAOK3Q9H2K8 898 aa20.86■□□□□ 0.93
TGFA-202ENST00000394241 SPINK5Q9NQ38 1064 aaPredicted RBP20.86■□□□□ 0.93
TGFA-202ENST00000394241 PDZRN3Q9UPQ7 1066 aa20.86■□□□□ 0.93
TGFA-202ENST00000394241 IQCA1LA6NCM1 817 aa20.85■□□□□ 0.93
TGFA-202ENST00000394241 TMEM88BA6NKF7 163 aa20.85■□□□□ 0.93
TGFA-202ENST00000394241 CANXP27824 592 aaKnown RBP20.85■□□□□ 0.93
TGFA-202ENST00000394241 BICDL1Q6ZP65 573 aa20.85■□□□□ 0.93
TGFA-202ENST00000394241 A1BGP04217 495 aa20.84■□□□□ 0.93
TGFA-202ENST00000394241 PDE6BP35913 854 aa20.84■□□□□ 0.93
TGFA-202ENST00000394241 DUSP27Q5VZP5 1158 aa20.84■□□□□ 0.93
TGFA-202ENST00000394241 CACNA1SQ13698 1873 aa20.84■□□□□ 0.93
TGFA-202ENST00000394241 ERBB4Q15303 1308 aa20.83■□□□□ 0.93
TGFA-202ENST00000394241 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
TGFA-202ENST00000394241 EIF2S2P20042 333 aaKnown RBP20.83■□□□□ 0.93
TGFA-202ENST00000394241 BRIP1Q9BX63 1249 aa20.83■□□□□ 0.93
TGFA-202ENST00000394241 IL6STP40189 918 aaPredicted RBP20.82■□□□□ 0.92
TGFA-202ENST00000394241 HDGFL1Q5TGJ6 251 aa20.82■□□□□ 0.92
TGFA-202ENST00000394241 NPM2Q86SE8 214 aaKnown RBP20.82■□□□□ 0.92
TGFA-202ENST00000394241 C8orf58Q8NAV2 365 aa20.82■□□□□ 0.92
TGFA-202ENST00000394241 TAF1DQ9H5J8 278 aaPredicted RBP20.82■□□□□ 0.92
TGFA-202ENST00000394241 SLX4Q8IY92 1834 aa20.82■□□□□ 0.92
TGFA-202ENST00000394241 ITGBL1O95965 494 aaPredicted RBP20.81■□□□□ 0.92
TGFA-202ENST00000394241 HSPA8P11142 646 aaKnown RBP20.81■□□□□ 0.92
TGFA-202ENST00000394241 L3MBTL3Q96JM7 780 aaPredicted RBP20.81■□□□□ 0.92
TGFA-202ENST00000394241 PCDH10Q9P2E7 1040 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms