RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 RAB11FIP4Q86YS3 637 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC194A0A1B0GVG4 234 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 GJC1P36383 396 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 GTF2A1P52655 376 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 TPD52P55327 224 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 CETN1Q12798 172 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC155Q8N6L0 562 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 RNF216Q9NWF9 866 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 IFIT3O14879 490 aaKnown RBP6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 KIF4AO95239 1232 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 MNAT1P51948 309 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 CFAP70Q5T0N1 1121 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF526Q8TF50 670 aaPredicted RBP6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 C11orf95C9JLR9 678 aaPredicted RBP6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 PPFIA3O75145 1194 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 TMEM57Q8N5G2 664 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 DNAAF4Q8WXU2 420 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 CABP1Q9NZU7 370 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 MSL1Q68DK7 614 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 CATIPQ7Z7H3 387 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC12Q8WUD4 166 aaPredicted RBP6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC8Q9H0W5 538 aaPredicted RBP6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 ADCY5O95622 1261 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 STARD3NLO95772 234 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 CFAP58Q5T655 872 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 DPH6Q7L8W6 267 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 BBXQ8WY36 941 aaPredicted RBP6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 SELENOSQ9BQE4 189 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 KIF20AO95235 890 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 HSPA4P34932 840 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 STX1AQ16623 288 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 KIAA0753Q2KHM9 967 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 TBC1D5Q92609 795 aa6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 RBM27Q9P2N5 1060 aaKnown RBP6.53□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF644Q9H582 1327 aaPredicted RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 CCDC196A0A1B0GTZ2 297 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 SH3BP5O60239 455 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 SSFA2P28290 1259 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 ACTN2P35609 894 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 GSTA5Q7RTV2 222 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 IQCGQ9H095 443 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 GDPD2Q9HCC8 539 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 HYPKQ9NX55 129 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 GNAT3A8MTJ3 354 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 NDC80O14777 642 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 WDHD1O75717 1129 aaPredicted RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 AMPD3Q01432 767 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 IQCA1Q86XH1 822 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 FAM114A1Q8IWE2 563 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 RPGRQ92834 1020 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 CIZ1Q9ULV3 898 aaPredicted RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 KRT13P13646 458 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 SLC5A1P13866 664 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 IDEP14735 1019 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 MX1P20591 662 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 GJB2P29033 226 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 CKAP4Q07065 602 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 TMCO4Q5TGY1 634 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 ZNF652Q9Y2D9 606 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 SMIM23A6NLE4 172 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 MAP7D1Q3KQU3 841 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 CTAGE5O15320 804 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 PTCD1O75127 700 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 MAP3K12Q12852 859 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 WDR63Q8IWG1 891 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 KIF1BPQ96EK5 621 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 NSRP1Q9H0G5 558 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 SLC12A5Q9H2X9 1139 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 EXOC1Q9NV70 894 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 ANAPC4Q9UJX5 808 aa6.52□□□□□ -1.37
GAPVD1-206ENST00000394104 RAB11FIP3O75154 756 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 ODF2LQ9ULJ1 636 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 CUX1P39880 1505 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 NOL3O60936 208 aaKnown RBP6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 LRRC45Q96CN5 670 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 RSPH14Q9UHP6 348 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 MRVI1Q9Y6F6 885 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 IFI16Q16666 785 aaKnown RBP6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 CCDC174Q6PII3 467 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 SCAPERQ9BY12 1400 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 TCP11L1Q9NUJ3 509 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 GSDMDP57764 484 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 MAP3K9P80192 1104 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 HSP90AA4PQ58FG1 418 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 STXBP4Q6ZWJ1 553 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 SCAND2PQ9GZW5 306 aaPredicted RBP6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 GNG11P61952 73 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 TMEM67Q5HYA8 995 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 MCM10Q7L590 875 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 VTI1AQ96AJ9 217 aa6.51□□□□□ -1.37
GAPVD1-206ENST00000394104 ECM2O94769 699 aaPredicted RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 ZC3H6P61129 1189 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 TRIM47Q96LD4 638 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 ZNF830Q96NB3 372 aaPredicted RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 SLC26A6Q9BXS9 759 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 KAT14Q9H8E8 782 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 TMOD3Q9NYL9 352 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 MYOM3Q5VTT5 1437 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 PHACTR2O75167 634 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms