RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 LMTK2Q8IWU2 1503 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 LARGE1O95461 756 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 CCDC8Q9H0W5 538 aaPredicted RBP13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 LRMPQ12912 555 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 EYA1Q99502 592 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 BOLA2Q9H3K6 86 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 PPLO60437 1756 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 CD163L1Q9NR16 1453 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 PTPRMP28827 1452 aa13.98□□□□□ -0.17
R3HDM2-203ENST00000393811 SCAND2PQ9GZW5 306 aaPredicted RBP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 DNAJC25Q9H1X3 360 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 TRMT1Q9NXH9 659 aaKnown RBP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 STAP2Q9UGK3 403 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 DNAAF4Q8WXU2 420 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 PA2G4Q9UQ80 394 aaKnown RBP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 V9GYY5 206 aaPredicted RBP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 CCDC73Q6ZRK6 1079 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
R3HDM2-203ENST00000393811 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 LIG1P18858 919 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 ADCK5Q3MIX3 580 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 PPFIA3O75145 1194 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 PTH1RQ03431 593 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 FMNL2Q96PY5 1086 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 SSH2Q76I76 1423 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
R3HDM2-203ENST00000393811 REREQ9P2R6 1566 aa13.96□□□□□ -0.18
R3HDM2-203ENST00000393811 ATP2B3Q16720 1220 aa13.96□□□□□ -0.18
R3HDM2-203ENST00000393811 ARHGEF28Q8N1W1 1705 aaKnown RBP13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 ATP7BP35670 1465 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 DMTNQ08495 405 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 VPS53Q5VIR6 699 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 CDC37L1Q7L3B6 337 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 LSG1Q9H089 658 aaKnown RBP13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 CHPF2Q9P2E5 772 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 MLH3Q9UHC1 1453 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 ME3Q16798 604 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 TTC6Q86TZ1 520 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 SDF4Q9BRK5 362 aa13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 GTPBP4Q9BZE4 634 aaKnown RBP13.95□□□□□ -0.18
R3HDM2-203ENST00000393811 ARHGEF40Q8TER5 1519 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 CBX8Q9HC52 389 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 NRBP1Q9UHY1 535 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 SSH3Q8TE77 659 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 HYPKQ9NX55 129 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 PRDM4Q9UKN5 801 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 PTPN14Q15678 1187 aa13.94□□□□□ -0.18
R3HDM2-203ENST00000393811 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 CREB3L3Q68CJ9 461 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 HOMER1Q86YM7 354 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 ERC1Q8IUD2 1116 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 DNAJC2Q99543 621 aaKnown RBP13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 ABCA9Q8IUA7 1624 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 IFT172Q9UG01 1749 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 AOX1Q06278 1338 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 HIP1O00291 1037 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 GORABQ5T7V8 394 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 EVI5LQ96CN4 794 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 YEATS2Q9ULM3 1422 aa13.93□□□□□ -0.18
R3HDM2-203ENST00000393811 CEP135Q66GS9 1140 aa13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 FAM227BQ96M60 508 aa13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 RPAP1Q9BWH6 1393 aaPredicted RBP13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 ERICH4A6NGS2 130 aa13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 ME1P48163 572 aa13.92□□□□□ -0.18
R3HDM2-203ENST00000393811 SMC2O95347 1197 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 LRRC2Q9BYS8 371 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 KCNF1Q9H3M0 494 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 PRR36Q9H6K5 1346 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 GUCY1B3Q02153 619 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 PI4K2BQ8TCG2 481 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 TPCN1Q9ULQ1 816 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 CCDC171Q6TFL3 1326 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 NPHP3Q7Z494 1330 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 METP08581 1390 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 SPTLC3Q9NUV7 552 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms