RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 NUP160Q12769 1436 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 RANBP6O60518 1105 aaKnown RBP8.34□□□□□ -1.07
DDX60-201ENST00000393743 POLD1P28340 1107 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 ERMNQ8TAM6 284 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 CCDC112Q8NEF3 446 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 RALGAPBQ86X10 1494 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 IFIT3O14879 490 aaKnown RBP8.34□□□□□ -1.07
DDX60-201ENST00000393743 NBPF7P0C2Y1 421 aaPredicted RBP8.34□□□□□ -1.07
DDX60-201ENST00000393743 CCDC172P0C7W6 258 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 ARHGAP29Q52LW3 1261 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 KIAA1328Q86T90 577 aa8.34□□□□□ -1.07
DDX60-201ENST00000393743 ZCRB1Q8TBF4 217 aaKnown RBP8.34□□□□□ -1.07
DDX60-201ENST00000393743 CTTNBP2Q8WZ74 1663 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 GOLGA8AA7E2F4 631 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 GOLGA8BA8MQT2 603 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
DDX60-201ENST00000393743 NBPF6Q5VWK0 638 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 CCDC91Q7Z6B0 441 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 NBPF5PQ86XG9 351 aaPredicted RBP8.33□□□□□ -1.08
DDX60-201ENST00000393743 FERMT2Q96AC1 680 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 NBPF4Q96M43 638 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 KDM5BQ9UGL1 1544 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 NLRP5P59047 1200 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 OGFOD1Q8N543 542 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 KAT14Q9H8E8 782 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 EXOC6BQ9Y2D4 811 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 NOS1P29475 1434 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 KIF4AO95239 1232 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 DDX12PQ92771 950 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 KRT23Q9C075 422 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 UGGT2Q9NYU1 1516 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 KIF21AQ7Z4S6 1674 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 CFAP43Q8NDM7 1665 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 RARSP54136 660 aaKnown RBP8.33□□□□□ -1.08
DDX60-201ENST00000393743 BACH2Q9BYV9 841 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 LRRC45Q96CN5 670 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 EYA3Q99504 573 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 LIMCH1Q9UPQ0 1083 aa8.33□□□□□ -1.08
DDX60-201ENST00000393743 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 NEMFO60524 1076 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 USO1O60763 962 aaKnown RBP8.32□□□□□ -1.08
DDX60-201ENST00000393743 SETDB2Q96T68 719 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 BOLA2Q9H3K6 86 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 ZNF518AQ6AHZ1 1483 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 CACNA2D4Q7Z3S7 1137 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 PLCH2O75038 1416 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 ACEP12821 1306 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 ANAPC15P60006 121 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 PDCL2Q8N4E4 241 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 DDX19AQ9NUU7 478 aaKnown RBP8.32□□□□□ -1.08
DDX60-201ENST00000393743 KIAA0754O94854 1291 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 MAP4K4O95819 1239 aaPredicted RBP8.32□□□□□ -1.08
DDX60-201ENST00000393743 WDR78Q5VTH9 848 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
DDX60-201ENST00000393743 PAXIP1Q6ZW49 1069 aaPredicted RBP8.32□□□□□ -1.08
DDX60-201ENST00000393743 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 SSH1Q8WYL5 1049 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 CCDC85AQ96PX6 553 aaPredicted RBP8.32□□□□□ -1.08
DDX60-201ENST00000393743 DUOX2Q9NRD8 1548 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 MFSD6Q6ZSS7 791 aa8.32□□□□□ -1.08
DDX60-201ENST00000393743 IARSP41252 1262 aaKnown RBP8.31□□□□□ -1.08
DDX60-201ENST00000393743 MAP9Q49MG5 647 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 AKAP4Q5JQC9 854 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 ZNF804AQ7Z570 1209 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 C19orf44Q9H6X5 657 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 TCOF1Q13428 1488 aaKnown RBP8.31□□□□□ -1.08
DDX60-201ENST00000393743 ADGRF5Q8IZF2 1346 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 ANKRD62A6NC57 917 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 TSPY2A6NKD2 308 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 CFAP100Q494V2 611 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 LRRC59Q96AG4 307 aaKnown RBP8.31□□□□□ -1.08
DDX60-201ENST00000393743 DRC1Q96MC2 740 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 TAOK3Q9H2K8 898 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 GNAT2P19087 354 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 RMND1Q9NWS8 449 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 EMILIN1Q9Y6C2 1016 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 ENOX2Q16206 610 aaKnown RBP8.31□□□□□ -1.08
DDX60-201ENST00000393743 DDB1Q16531 1140 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
DDX60-201ENST00000393743 CERS3Q8IU89 383 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 ZNF622Q969S3 477 aaKnown RBP eCLIP8.31□□□□□ -1.08
DDX60-201ENST00000393743 ANKRD2Q9GZV1 360 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 FBXO3Q9UK99 471 aa8.31□□□□□ -1.08
DDX60-201ENST00000393743 SFPQP23246 707 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDX60-201ENST00000393743 IL15P40933 162 aaPredicted RBP8.3□□□□□ -1.08
DDX60-201ENST00000393743 LRRFIP2Q9Y608 721 aaKnown RBP8.3□□□□□ -1.08
DDX60-201ENST00000393743 A2MP01023 1474 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 GOLGA6L9A6NEM1 432 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 GOLIM4O00461 696 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 MAP3K2Q9Y2U5 619 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 YEATS4O95619 227 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 CALM1P0DP23 149 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 CALM2P0DP24 149 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms