RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 NUDCQ9Y266 331 aa24.8■■□□□ 1.56
SNCB-202ENST00000393693 TIAM2Q8IVF5 1701 aa24.8■■□□□ 1.56
SNCB-202ENST00000393693 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
SNCB-202ENST00000393693 PPP2R1AP30153 589 aa24.79■■□□□ 1.56
SNCB-202ENST00000393693 ERFEQ4G0M1 354 aa24.78■■□□□ 1.56
SNCB-202ENST00000393693 SRGNP10124 158 aa24.77■■□□□ 1.56
SNCB-202ENST00000393693 ST5P78524 1137 aa24.77■■□□□ 1.56
SNCB-202ENST00000393693 DPY19L2Q6NUT2 758 aa24.77■■□□□ 1.56
SNCB-202ENST00000393693 RTF1Q92541 710 aaKnown RBP24.77■■□□□ 1.56
SNCB-202ENST00000393693 SNRPA1P09661 255 aaKnown RBP24.76■■□□□ 1.55
SNCB-202ENST00000393693 STYK1Q6J9G0 422 aa24.76■■□□□ 1.55
SNCB-202ENST00000393693 PRPF40BQ6NWY9 871 aaKnown RBP24.76■■□□□ 1.55
SNCB-202ENST00000393693 CNKSR1Q969H4 720 aa24.76■■□□□ 1.55
SNCB-202ENST00000393693 MASTLQ96GX5 879 aa24.75■■□□□ 1.55
SNCB-202ENST00000393693 TAOK3Q9H2K8 898 aa24.75■■□□□ 1.55
SNCB-202ENST00000393693 NBPF26B4DH59 902 aa24.74■■□□□ 1.55
SNCB-202ENST00000393693 NBPF10Q6P3W6 841 aaKnown RBP24.74■■□□□ 1.55
SNCB-202ENST00000393693 NBPF5PQ86XG9 351 aaPredicted RBP24.74■■□□□ 1.55
SNCB-202ENST00000393693 NBPF15Q8N660 670 aa24.74■■□□□ 1.55
SNCB-202ENST00000393693 BCORQ6W2J9 1755 aa24.74■■□□□ 1.55
SNCB-202ENST00000393693 FER1L6Q2WGJ9 1857 aa24.73■■□□□ 1.55
SNCB-202ENST00000393693 SLX4Q8IY92 1834 aa24.73■■□□□ 1.55
SNCB-202ENST00000393693 COL13A1Q5TAT6 717 aaPredicted RBP24.73■■□□□ 1.55
SNCB-202ENST00000393693 LTBP3Q9NS15 1303 aa24.72■■□□□ 1.55
SNCB-202ENST00000393693 CLEC4GQ6UXB4 293 aa24.72■■□□□ 1.55
SNCB-202ENST00000393693 MIER1Q8N108 512 aa24.72■■□□□ 1.55
SNCB-202ENST00000393693 MIS18AQ9NYP9 233 aa24.72■■□□□ 1.55
SNCB-202ENST00000393693 DDNO94850 711 aaPredicted RBP24.71■■□□□ 1.55
SNCB-202ENST00000393693 FAM177BA6PVY3 158 aa24.7■■□□□ 1.54
SNCB-202ENST00000393693 ANP32CO43423 234 aa24.7■■□□□ 1.54
SNCB-202ENST00000393693 ZNF652Q9Y2D9 606 aa24.7■■□□□ 1.54
SNCB-202ENST00000393693 POTEIP0CG38 1075 aa24.69■■□□□ 1.54
SNCB-202ENST00000393693 POTEJP0CG39 1038 aa24.69■■□□□ 1.54
SNCB-202ENST00000393693 C7orf43Q8WVR3 580 aa24.69■■□□□ 1.54
SNCB-202ENST00000393693 NIP7Q9Y221 180 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNCB-202ENST00000393693 HTATSF1O43719 755 aaKnown RBP24.68■■□□□ 1.54
SNCB-202ENST00000393693 TAF7Q15545 349 aaPredicted RBP24.68■■□□□ 1.54
SNCB-202ENST00000393693 HLFQ16534 295 aa24.68■■□□□ 1.54
SNCB-202ENST00000393693 CACNA1SQ13698 1873 aa24.68■■□□□ 1.54
SNCB-202ENST00000393693 DICER1Q9UPY3 1922 aaKnown RBP24.67■■□□□ 1.54
SNCB-202ENST00000393693 SOGA3Q5TF21 947 aa24.67■■□□□ 1.54
SNCB-202ENST00000393693 OLFM4Q6UX06 510 aa24.67■■□□□ 1.54
SNCB-202ENST00000393693 KLRG2A4D1S0 409 aaPredicted RBP24.66■■□□□ 1.54
SNCB-202ENST00000393693 NPR1P16066 1061 aa24.66■■□□□ 1.54
SNCB-202ENST00000393693 TPTE2Q6XPS3 522 aa24.66■■□□□ 1.54
SNCB-202ENST00000393693 CCDC93Q567U6 631 aa24.65■■□□□ 1.54
SNCB-202ENST00000393693 PCNTO95613 3336 aa24.64■■□□□ 1.54
SNCB-202ENST00000393693 CHADLQ6NUI6 762 aa24.64■■□□□ 1.54
SNCB-202ENST00000393693 NGEFQ8N5V2 710 aa24.64■■□□□ 1.54
SNCB-202ENST00000393693 ARFGEF2Q9Y6D5 1785 aa24.63■■□□□ 1.53
SNCB-202ENST00000393693 ZNF277Q9NRM2 450 aaPredicted RBP24.63■■□□□ 1.53
SNCB-202ENST00000393693 HSPA1AP0DMV8 641 aaKnown RBP24.62■■□□□ 1.53
SNCB-202ENST00000393693 HSPA1BP0DMV9 641 aaKnown RBP24.62■■□□□ 1.53
SNCB-202ENST00000393693 RGL2O15211 777 aa24.61■■□□□ 1.53
SNCB-202ENST00000393693 FKBP4Q02790 459 aaKnown RBP eCLIP24.61■■□□□ 1.53
SNCB-202ENST00000393693 THUMPD2Q9BTF0 503 aaKnown RBP24.6■■□□□ 1.53
SNCB-202ENST00000393693 ZNF541Q9H0D2 1346 aa24.6■■□□□ 1.53
SNCB-202ENST00000393693 GTF2E1P29083 439 aaPredicted RBP24.59■■□□□ 1.53
SNCB-202ENST00000393693 TTLL7Q6ZT98 887 aa24.58■■□□□ 1.53
SNCB-202ENST00000393693 NUTM1Q86Y26 1132 aa24.58■■□□□ 1.53
SNCB-202ENST00000393693 L3MBTL3Q96JM7 780 aaPredicted RBP24.58■■□□□ 1.53
SNCB-202ENST00000393693 PLEKHF1Q96S99 279 aa24.58■■□□□ 1.53
SNCB-202ENST00000393693 TAF1DQ9H5J8 278 aaPredicted RBP24.58■■□□□ 1.53
SNCB-202ENST00000393693 MKRN1Q9UHC7 482 aaKnown RBP24.58■■□□□ 1.53
SNCB-202ENST00000393693 RRP7AQ9Y3A4 280 aaKnown RBP24.58■■□□□ 1.53
SNCB-202ENST00000393693 IQCA1LA6NCM1 817 aa24.57■■□□□ 1.52
SNCB-202ENST00000393693 CAPN15O75808 1086 aa24.57■■□□□ 1.52
SNCB-202ENST00000393693 EIF4A1P60842 406 aaKnown RBP24.57■■□□□ 1.52
SNCB-202ENST00000393693 TNS4Q8IZW8 715 aa24.57■■□□□ 1.52
SNCB-202ENST00000393693 PNISRQ8TF01 805 aaKnown RBP24.57■■□□□ 1.52
SNCB-202ENST00000393693 CREBZFQ9NS37 354 aa24.57■■□□□ 1.52
SNCB-202ENST00000393693 ABCC12Q96J65 1359 aa24.56■■□□□ 1.52
SNCB-202ENST00000393693 NEFMP07197 916 aa24.56■■□□□ 1.52
SNCB-202ENST00000393693 ALDH1B1P30837 517 aa24.56■■□□□ 1.52
SNCB-202ENST00000393693 RTKN2Q8IZC4 609 aa24.56■■□□□ 1.52
SNCB-202ENST00000393693 SYNE4Q8N205 404 aa24.56■■□□□ 1.52
SNCB-202ENST00000393693 MYL6BP14649 208 aa24.55■■□□□ 1.52
SNCB-202ENST00000393693 ERVV-1B6SEH8 477 aa24.54■■□□□ 1.52
SNCB-202ENST00000393693 NFE2L2Q16236 605 aa24.54■■□□□ 1.52
SNCB-202ENST00000393693 LDHDQ86WU2 507 aa24.54■■□□□ 1.52
SNCB-202ENST00000393693 MAP3K15Q6ZN16 1313 aa24.54■■□□□ 1.52
SNCB-202ENST00000393693 LAMB4A4D0S4 1761 aa24.54■■□□□ 1.52
SNCB-202ENST00000393693 GPTP24298 496 aa24.53■■□□□ 1.52
SNCB-202ENST00000393693 IARSP41252 1262 aaKnown RBP24.53■■□□□ 1.52
SNCB-202ENST00000393693 EAPPQ56P03 285 aaPredicted RBP24.53■■□□□ 1.52
SNCB-202ENST00000393693 ZBTB3Q9H5J0 574 aa24.53■■□□□ 1.52
SNCB-202ENST00000393693 PASKQ96RG2 1323 aa24.53■■□□□ 1.52
SNCB-202ENST00000393693 KDM3BQ7LBC6 1761 aa24.52■■□□□ 1.52
SNCB-202ENST00000393693 CRY2Q49AN0 593 aa24.52■■□□□ 1.52
SNCB-202ENST00000393693 KIF6Q6ZMV9 814 aa24.52■■□□□ 1.52
SNCB-202ENST00000393693 SLC51AQ86UW1 340 aa24.52■■□□□ 1.52
SNCB-202ENST00000393693 NYXQ9GZU5 481 aa24.52■■□□□ 1.52
SNCB-202ENST00000393693 DLG5Q8TDM6 1919 aa24.52■■□□□ 1.52
SNCB-202ENST00000393693 UBN2Q6ZU65 1347 aa24.52■■□□□ 1.52
SNCB-202ENST00000393693 CCER2I3L3R5 266 aa24.51■■□□□ 1.51
SNCB-202ENST00000393693 FZD9O00144 591 aa24.51■■□□□ 1.51
SNCB-202ENST00000393693 SUSD4Q5VX71 490 aa24.51■■□□□ 1.51
SNCB-202ENST00000393693 HACL1Q9UJ83 578 aa24.51■■□□□ 1.51
SNCB-202ENST00000393693 CLEC11AQ9Y240 323 aa24.5■■□□□ 1.51
SNCB-202ENST00000393693 RNF123Q5XPI4 1314 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms