RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
SFXN3-202ENST00000393459 TYRO3Q06418 890 aa17.32■□□□□ 0.36
SFXN3-202ENST00000393459 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
SFXN3-202ENST00000393459 PLEKHG1Q9ULL1 1385 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 ATP7BP35670 1465 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 WASLO00401 505 aaPredicted RBP17.31■□□□□ 0.36
SFXN3-202ENST00000393459 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 GTF3C6Q969F1 213 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 LIMCH1Q9UPQ0 1083 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 GOLGA6L6A8MZA4 724 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 UBTFL1P0CB47 393 aaPredicted RBP17.31■□□□□ 0.36
SFXN3-202ENST00000393459 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
SFXN3-202ENST00000393459 FLIIQ13045 1269 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 PPP1R42Q7Z4L9 355 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
SFXN3-202ENST00000393459 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
SFXN3-202ENST00000393459 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
SFXN3-202ENST00000393459 COL3A1P02461 1466 aaPredicted RBP17.3■□□□□ 0.36
SFXN3-202ENST00000393459 CACTINQ8WUQ7 758 aaKnown RBP17.3■□□□□ 0.36
SFXN3-202ENST00000393459 CBX8Q9HC52 389 aa17.3■□□□□ 0.36
SFXN3-202ENST00000393459 PDRG1Q9NUG6 133 aa17.3■□□□□ 0.36
SFXN3-202ENST00000393459 CLIP2Q9UDT6 1046 aa17.3■□□□□ 0.36
SFXN3-202ENST00000393459 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
SFXN3-202ENST00000393459 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
SFXN3-202ENST00000393459 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
SFXN3-202ENST00000393459 CPS1P31327 1500 aa17.3■□□□□ 0.36
SFXN3-202ENST00000393459 ELF2Q15723 593 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 GTPBP4Q9BZE4 634 aaKnown RBP17.29■□□□□ 0.36
SFXN3-202ENST00000393459 SIL1Q9H173 461 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 ZNF215Q9UL58 517 aaPredicted RBP17.29■□□□□ 0.36
SFXN3-202ENST00000393459 BRPF1P55201 1214 aaPredicted RBP17.29■□□□□ 0.36
SFXN3-202ENST00000393459 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 ME3Q16798 604 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 UTP14CQ5TAP6 766 aaKnown RBP17.29■□□□□ 0.36
SFXN3-202ENST00000393459 FAM177A1Q8N128 213 aaPredicted RBP17.29■□□□□ 0.36
SFXN3-202ENST00000393459 MTMR6Q9Y217 621 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 C3P01024 1663 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 ISM2Q6H9L7 571 aa17.29■□□□□ 0.36
SFXN3-202ENST00000393459 INTS4Q96HW7 963 aaKnown RBP17.29■□□□□ 0.36
SFXN3-202ENST00000393459 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
SFXN3-202ENST00000393459 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
SFXN3-202ENST00000393459 ADAMTS13Q76LX8 1427 aa17.28■□□□□ 0.36
SFXN3-202ENST00000393459 NR1I2O75469 434 aa17.28■□□□□ 0.36
SFXN3-202ENST00000393459 CHGBP05060 677 aa17.28■□□□□ 0.36
SFXN3-202ENST00000393459 SPTLC3Q9NUV7 552 aa17.28■□□□□ 0.36
SFXN3-202ENST00000393459 MRVI1Q9Y6F6 885 aa17.28■□□□□ 0.36
SFXN3-202ENST00000393459 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
SFXN3-202ENST00000393459 PIK3R4Q99570 1358 aa17.27■□□□□ 0.36
SFXN3-202ENST00000393459 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.36
SFXN3-202ENST00000393459 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
SFXN3-202ENST00000393459 ZNF165P49910 485 aa17.27■□□□□ 0.36
SFXN3-202ENST00000393459 UVSSAQ2YD98 709 aa17.27■□□□□ 0.36
SFXN3-202ENST00000393459 POLR3GO15318 223 aaPredicted RBP17.27■□□□□ 0.36
SFXN3-202ENST00000393459 HSPA4P34932 840 aa17.27■□□□□ 0.36
SFXN3-202ENST00000393459 CHL1O00533 1208 aa17.27■□□□□ 0.35
SFXN3-202ENST00000393459 LTKP29376 864 aa17.27■□□□□ 0.35
SFXN3-202ENST00000393459 EDC3Q96F86 508 aaKnown RBP17.27■□□□□ 0.35
SFXN3-202ENST00000393459 SPATA32Q96LK8 384 aa17.27■□□□□ 0.35
SFXN3-202ENST00000393459 FAM227BQ96M60 508 aa17.26■□□□□ 0.35
SFXN3-202ENST00000393459 KIF20BQ96Q89 1820 aa17.26■□□□□ 0.35
SFXN3-202ENST00000393459 RAB11FIP3O75154 756 aa17.26■□□□□ 0.35
SFXN3-202ENST00000393459 ZSCAN25Q6NSZ9 544 aa17.26■□□□□ 0.35
SFXN3-202ENST00000393459 FAM200AQ8TCP9 573 aa17.26■□□□□ 0.35
SFXN3-202ENST00000393459 SLIT1O75093 1534 aa17.25■□□□□ 0.35
SFXN3-202ENST00000393459 JAK2O60674 1132 aa17.25■□□□□ 0.35
SFXN3-202ENST00000393459 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
SFXN3-202ENST00000393459 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
SFXN3-202ENST00000393459 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
SFXN3-202ENST00000393459 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
SFXN3-202ENST00000393459 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
SFXN3-202ENST00000393459 TPCN1Q9ULQ1 816 aa17.25■□□□□ 0.35
SFXN3-202ENST00000393459 CDC42BPGQ6DT37 1551 aa17.25■□□□□ 0.35
SFXN3-202ENST00000393459 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
SFXN3-202ENST00000393459 GTF2F1P35269 517 aaKnown RBP eCLIP17.24■□□□□ 0.35
SFXN3-202ENST00000393459 CEP135Q66GS9 1140 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 LRRN4CLQ8ND94 238 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 KIF20AO95235 890 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 CTNNA3Q9UI47 895 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
SFXN3-202ENST00000393459 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 RGS12O14924 1447 aa17.24■□□□□ 0.35
SFXN3-202ENST00000393459 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
SFXN3-202ENST00000393459 GOLGA6L19H0YKK7 550 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 SGSM2O43147 1006 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 KRT85P78386 507 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 KMT5BQ4FZB7 885 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 EPC1Q9H2F5 836 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 BECN2A8MW95 431 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 FUCA2Q9BTY2 467 aa17.23■□□□□ 0.35
SFXN3-202ENST00000393459 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms