RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 SSH3Q8TE77 659 aa18.12■□□□□ 0.49
SHTN1-204ENST00000392903 TMEM94Q12767 1356 aa18.12■□□□□ 0.49
SHTN1-204ENST00000392903 TRPM3Q9HCF6 1732 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-204ENST00000392903 REC8O95072 547 aa18.11■□□□□ 0.49
SHTN1-204ENST00000392903 ZNF710Q8N1W2 664 aa18.11■□□□□ 0.49
SHTN1-204ENST00000392903 PIBF1Q8WXW3 757 aa18.11■□□□□ 0.49
SHTN1-204ENST00000392903 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
SHTN1-204ENST00000392903 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
SHTN1-204ENST00000392903 GTPBP4Q9BZE4 634 aaKnown RBP18.11■□□□□ 0.49
SHTN1-204ENST00000392903 MAP3K2Q9Y2U5 619 aa18.11■□□□□ 0.49
SHTN1-204ENST00000392903 UNC5CLQ8IV45 518 aa18.1■□□□□ 0.49
SHTN1-204ENST00000392903 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
SHTN1-204ENST00000392903 SYAP1Q96A49 352 aaPredicted RBP18.1■□□□□ 0.49
SHTN1-204ENST00000392903 ADCY9O60503 1353 aa18.1■□□□□ 0.49
SHTN1-204ENST00000392903 CHRNA2Q15822 529 aa18.1■□□□□ 0.49
SHTN1-204ENST00000392903 CHAMP1Q96JM3 812 aa18.1■□□□□ 0.49
SHTN1-204ENST00000392903 AIMP1Q12904 312 aaKnown RBP18.09■□□□□ 0.49
SHTN1-204ENST00000392903 DNTTIP2Q5QJE6 756 aaKnown RBP18.09■□□□□ 0.49
SHTN1-204ENST00000392903 CHMP4AQ9BY43 222 aa18.09■□□□□ 0.49
SHTN1-204ENST00000392903 BRD1O95696 1058 aa18.09■□□□□ 0.49
SHTN1-204ENST00000392903 MAP4K4O95819 1239 aaPredicted RBP18.09■□□□□ 0.49
SHTN1-204ENST00000392903 CSB-PGBD3P0DP91 1061 aa18.09■□□□□ 0.49
SHTN1-204ENST00000392903 HSPA2P54652 639 aa18.08■□□□□ 0.49
SHTN1-204ENST00000392903 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.49
SHTN1-204ENST00000392903 UVSSAQ2YD98 709 aa18.08■□□□□ 0.49
SHTN1-204ENST00000392903 FAM184AQ8NB25 1140 aa18.08■□□□□ 0.49
SHTN1-204ENST00000392903 NCAPD2Q15021 1401 aa18.08■□□□□ 0.48
SHTN1-204ENST00000392903 POLA2Q14181 598 aa18.08■□□□□ 0.48
SHTN1-204ENST00000392903 C9orf78Q9NZ63 289 aaPredicted RBP18.08■□□□□ 0.48
SHTN1-204ENST00000392903 PHF14O94880 888 aa18.07■□□□□ 0.48
SHTN1-204ENST00000392903 NOLC1Q14978 699 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHTN1-204ENST00000392903 NFATC2IPQ8NCF5 419 aa18.07■□□□□ 0.48
SHTN1-204ENST00000392903 RHPN1Q8TCX5 695 aa18.07■□□□□ 0.48
SHTN1-204ENST00000392903 KIF20AO95235 890 aa18.07■□□□□ 0.48
SHTN1-204ENST00000392903 ESYT1Q9BSJ8 1104 aa18.07■□□□□ 0.48
SHTN1-204ENST00000392903 N4BP2Q86UW6 1770 aaPredicted RBP18.06■□□□□ 0.48
SHTN1-204ENST00000392903 A0A0U1RQG5 324 aaPredicted RBP18.06■□□□□ 0.48
SHTN1-204ENST00000392903 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
SHTN1-204ENST00000392903 MST1RQ04912 1400 aa18.06■□□□□ 0.48
SHTN1-204ENST00000392903 CHMLP26374 656 aa18.06■□□□□ 0.48
SHTN1-204ENST00000392903 KSR2Q6VAB6 950 aa18.06■□□□□ 0.48
SHTN1-204ENST00000392903 SPTLC3Q9NUV7 552 aa18.06■□□□□ 0.48
SHTN1-204ENST00000392903 ANO2Q9NQ90 1003 aa18.05■□□□□ 0.48
SHTN1-204ENST00000392903 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
SHTN1-204ENST00000392903 KIF1AQ12756 1690 aa18.05■□□□□ 0.48
SHTN1-204ENST00000392903 RAB11FIP3O75154 756 aa18.04■□□□□ 0.48
SHTN1-204ENST00000392903 MCM2P49736 904 aa18.04■□□□□ 0.48
SHTN1-204ENST00000392903 OS9Q13438 667 aaPredicted RBP18.04■□□□□ 0.48
SHTN1-204ENST00000392903 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
SHTN1-204ENST00000392903 JARID2Q92833 1246 aaPredicted RBP18.04■□□□□ 0.48
SHTN1-204ENST00000392903 TMX3Q96JJ7 454 aa18.04■□□□□ 0.48
SHTN1-204ENST00000392903 MYL6BP14649 208 aa18.04■□□□□ 0.48
SHTN1-204ENST00000392903 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
SHTN1-204ENST00000392903 CUL4AQ13619 759 aa18.04■□□□□ 0.48
SHTN1-204ENST00000392903 HEG1Q9ULI3 1381 aa18.04■□□□□ 0.48
SHTN1-204ENST00000392903 TSC1Q92574 1164 aa18.03■□□□□ 0.48
SHTN1-204ENST00000392903 NPHP3Q7Z494 1330 aa18.03■□□□□ 0.48
SHTN1-204ENST00000392903 ALS2Q96Q42 1657 aa18.03■□□□□ 0.48
SHTN1-204ENST00000392903 FOXD4L5Q5VV16 416 aaPredicted RBP18.03■□□□□ 0.48
SHTN1-204ENST00000392903 FOXD4L4Q8WXT5 416 aaPredicted RBP18.03■□□□□ 0.48
SHTN1-204ENST00000392903 KIF1BPQ96EK5 621 aa18.03■□□□□ 0.48
SHTN1-204ENST00000392903 SLC52A2Q9HAB3 445 aa18.03■□□□□ 0.48
SHTN1-204ENST00000392903 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
SHTN1-204ENST00000392903 STRCP1A6NGW2 1772 aa18.03■□□□□ 0.48
SHTN1-204ENST00000392903 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
SHTN1-204ENST00000392903 PHKG2P15735 406 aa18.02■□□□□ 0.48
SHTN1-204ENST00000392903 NEK4P51957 841 aa18.02■□□□□ 0.48
SHTN1-204ENST00000392903 INTS4Q96HW7 963 aaKnown RBP18.02■□□□□ 0.48
SHTN1-204ENST00000392903 IL25Q9H293 177 aa18.02■□□□□ 0.48
SHTN1-204ENST00000392903 PIP4K2AP48426 406 aaPredicted RBP18.02■□□□□ 0.47
SHTN1-204ENST00000392903 CBX1P83916 185 aa18.02■□□□□ 0.47
SHTN1-204ENST00000392903 PDIA6Q15084 440 aa18.02■□□□□ 0.47
SHTN1-204ENST00000392903 PPP4R3BQ5MIZ7 849 aa18.02■□□□□ 0.47
SHTN1-204ENST00000392903 PALD1Q9ULE6 856 aa18.02■□□□□ 0.47
SHTN1-204ENST00000392903 PA2G4Q9UQ80 394 aaKnown RBP18.02■□□□□ 0.47
SHTN1-204ENST00000392903 SPG7Q9UQ90 795 aa18.02■□□□□ 0.47
SHTN1-204ENST00000392903 ATP2B3Q16720 1220 aa18.01■□□□□ 0.47
SHTN1-204ENST00000392903 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
SHTN1-204ENST00000392903 OVOS2A0A0G2JMS6 1433 aa18.01■□□□□ 0.47
SHTN1-204ENST00000392903 PI4K2BQ8TCG2 481 aa18.01■□□□□ 0.47
SHTN1-204ENST00000392903 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
SHTN1-204ENST00000392903 TUBGCP6Q96RT7 1819 aa18.01■□□□□ 0.47
SHTN1-204ENST00000392903 KDM6AO15550 1401 aaPredicted RBP18■□□□□ 0.47
SHTN1-204ENST00000392903 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
SHTN1-204ENST00000392903 ALDH1L1O75891 902 aa18■□□□□ 0.47
SHTN1-204ENST00000392903 RIC3Q7Z5B4 369 aa18■□□□□ 0.47
SHTN1-204ENST00000392903 ZNF496Q96IT1 587 aaPredicted RBP18■□□□□ 0.47
SHTN1-204ENST00000392903 ZNF830Q96NB3 372 aaPredicted RBP18■□□□□ 0.47
SHTN1-204ENST00000392903 MEGF6O75095 1541 aa18■□□□□ 0.47
SHTN1-204ENST00000392903 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
SHTN1-204ENST00000392903 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
SHTN1-204ENST00000392903 USP25Q9UHP3 1055 aa17.99■□□□□ 0.47
SHTN1-204ENST00000392903 CYP27B1O15528 508 aa17.99■□□□□ 0.47
SHTN1-204ENST00000392903 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
SHTN1-204ENST00000392903 TTC12Q9H892 705 aaPredicted RBP17.99■□□□□ 0.47
SHTN1-204ENST00000392903 SIPA1L3O60292 1781 aaPredicted RBP17.98■□□□□ 0.47
SHTN1-204ENST00000392903 ADCY5O95622 1261 aa17.98■□□□□ 0.47
SHTN1-204ENST00000392903 DDX58O95786 925 aaKnown RBP17.98■□□□□ 0.47
SHTN1-204ENST00000392903 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
SHTN1-204ENST00000392903 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms