RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 RIPK4P57078 832 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 RNF187Q5TA31 235 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-204ENST00000392869 CCDC129Q6ZRS4 1044 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 ZMAT2Q96NC0 199 aaKnown RBP7.02□□□□□ -1.29
GTDC1-204ENST00000392869 MYO1BO43795 1136 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 IKQ13123 557 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-204ENST00000392869 SMAP1Q8IYB5 467 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-204ENST00000392869 COG6Q9Y2V7 657 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 CCDC82Q8N4S0 544 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 MCM6Q14566 821 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 GPATCH11Q8N954 259 aa7.02□□□□□ -1.29
GTDC1-204ENST00000392869 RBM27Q9P2N5 1060 aaKnown RBP7.02□□□□□ -1.29
GTDC1-204ENST00000392869 MACROD2A1Z1Q3 448 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 CLCN1P35523 988 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 MAP3K7CLP57077 242 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 OTUD6BQ8N6M0 293 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 STRN4Q9NRL3 753 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 FHOD3Q2V2M9 1422 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 KRT86O43790 486 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 CIB2O75838 187 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 SNW1Q13573 536 aaKnown RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 AMOTQ4VCS5 1084 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 TBC1D5Q92609 795 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 MCM4P33991 863 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 GPR161Q8N6U8 529 aaKnown RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 ODF2LQ9ULJ1 636 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 TNNT1P13805 278 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 RIC3Q7Z5B4 369 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 ZNF526Q8TF50 670 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 CCDC113Q9H0I3 377 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 MTRF1LQ9UGC7 380 aaKnown RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 GAS8O95995 478 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 NUP88Q99567 741 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 TACO1Q9BSH4 297 aaKnown RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 CTAGE9A4FU28 777 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 ERICH4A6NGS2 130 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 STK24Q9Y6E0 443 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 FIBPO43427 364 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 BAG4O95429 457 aaKnown RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 GABPB1Q06547 395 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.01□□□□□ -1.29
GTDC1-204ENST00000392869 PPP2R5EQ16537 467 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 RPGRIP1Q96KN7 1286 aa7.01□□□□□ -1.29
GTDC1-204ENST00000392869 EVA1CP58658 441 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 UBAC1Q9BSL1 405 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 HMG20BQ9P0W2 317 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 SNX16P57768 344 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 ZNF365Q70YC5 407 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 VAV2P52735 878 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 FYB2Q5VWT5 728 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 RAD21O60216 631 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 SLC4A8Q2Y0W8 1093 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 GBP7Q8N8V2 638 aaPredicted RBP7□□□□□ -1.29
GTDC1-204ENST00000392869 CTAGE15A4D2H0 777 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 CTAGE8P0CG41 777 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 CTAGE6Q86UF2 777 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 CTAGE4Q8IX94 777 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 RAPGEF4Q8WZA2 1011 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 BACH2Q9BYV9 841 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 SUPT6HQ7KZ85 1726 aaKnown RBP7□□□□□ -1.29
GTDC1-204ENST00000392869 UBE2HP62256 183 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 ZHX1Q9UKY1 873 aaPredicted RBP7□□□□□ -1.29
GTDC1-204ENST00000392869 SRGAP1Q7Z6B7 1085 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 GOPCQ9HD26 462 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 PLCB1Q9NQ66 1216 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 PRC1O43663 620 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 HLTFQ14527 1009 aaKnown RBP eCLIP7□□□□□ -1.29
GTDC1-204ENST00000392869 SLMAPQ14BN4 828 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 PANK3Q9H999 370 aa7□□□□□ -1.29
GTDC1-204ENST00000392869 WHAMMP3Q1A5X7 153 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 NAA16Q6N069 864 aaPredicted RBP6.99□□□□□ -1.29
GTDC1-204ENST00000392869 SMC1BQ8NDV3 1235 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 L3MBTL2Q969R5 705 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 OGFRQ9NZT2 677 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 GTF2F1P35269 517 aaKnown RBP eCLIP6.99□□□□□ -1.29
GTDC1-204ENST00000392869 TRIM14Q14142 442 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 SKIDA1Q1XH10 827 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 LMAN1P49257 510 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 UBE4AQ14139 1066 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 LTV1Q96GA3 475 aaPredicted RBP6.99□□□□□ -1.29
GTDC1-204ENST00000392869 CALML4Q96GE6 196 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 TSPYL4Q9UJ04 414 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 TDRD9Q8NDG6 1382 aaKnown RBP6.99□□□□□ -1.29
GTDC1-204ENST00000392869 ABCC11Q96J66 1382 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 SLC8A1P32418 973 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 GOLGA6CA6NDK9 693 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 GOLGA6BA6NDN3 693 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 GOLGA6DP0CG33 693 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 KLHL40Q2TBA0 621 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 CFAP58Q5T655 872 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 ZNF692Q9BU19 519 aaPredicted RBP6.99□□□□□ -1.29
GTDC1-204ENST00000392869 GOLGA6AQ9NYA3 693 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 MRVI1Q9Y6F6 885 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 HDXQ7Z353 690 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 EXOC6Q8TAG9 804 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 PPP1R12CQ9BZL4 782 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 TCP11L1Q9NUJ3 509 aa6.99□□□□□ -1.29
GTDC1-204ENST00000392869 EFCAB5A4FU69 1503 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms