RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 GRPEL1Q9HAV7 217 aa19.52■□□□□ 0.72
SCN3B-202ENST00000392770 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
SCN3B-202ENST00000392770 ORAI2Q96SN7 254 aa19.52■□□□□ 0.71
SCN3B-202ENST00000392770 ZNF213O14771 459 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 AK7Q96M32 723 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 LARP6Q9BRS8 491 aaKnown RBP19.51■□□□□ 0.71
SCN3B-202ENST00000392770 FAM13BQ9NYF5 915 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 PDIA4P13667 645 aaKnown RBP19.51■□□□□ 0.71
SCN3B-202ENST00000392770 ATP6V1AP38606 617 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 DZIP1Q86YF9 867 aaKnown RBP19.51■□□□□ 0.71
SCN3B-202ENST00000392770 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 SNRKQ9NRH2 765 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 PDE1AP54750 535 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 CCDC70Q6NSX1 233 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
SCN3B-202ENST00000392770 EPS15P42566 896 aa19.51■□□□□ 0.71
SCN3B-202ENST00000392770 EFCAB6Q5THR3 1501 aa19.5■□□□□ 0.71
SCN3B-202ENST00000392770 SYNMO15061 1565 aa19.5■□□□□ 0.71
SCN3B-202ENST00000392770 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
SCN3B-202ENST00000392770 FERMT3Q86UX7 667 aa19.5■□□□□ 0.71
SCN3B-202ENST00000392770 LTKP29376 864 aa19.5■□□□□ 0.71
SCN3B-202ENST00000392770 DCAF5Q96JK2 942 aa19.5■□□□□ 0.71
SCN3B-202ENST00000392770 ZBTB40Q9NUA8 1239 aa19.5■□□□□ 0.71
SCN3B-202ENST00000392770 CDC5LQ99459 802 aaKnown RBP19.5■□□□□ 0.71
SCN3B-202ENST00000392770 PCDH11XQ9BZA7 1347 aa19.49■□□□□ 0.71
SCN3B-202ENST00000392770 PCDH11YQ9BZA8 1340 aa19.49■□□□□ 0.71
SCN3B-202ENST00000392770 BRPF3Q9ULD4 1205 aa19.49■□□□□ 0.71
SCN3B-202ENST00000392770 TOM1O60784 492 aa19.49■□□□□ 0.71
SCN3B-202ENST00000392770 SSFA2P28290 1259 aa19.49■□□□□ 0.71
SCN3B-202ENST00000392770 SPC24Q8NBT2 197 aa19.49■□□□□ 0.71
SCN3B-202ENST00000392770 NUP62CLQ9H1M0 184 aa19.49■□□□□ 0.71
SCN3B-202ENST00000392770 POLR3DP05423 398 aaPredicted RBP19.49■□□□□ 0.71
SCN3B-202ENST00000392770 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
SCN3B-202ENST00000392770 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
SCN3B-202ENST00000392770 CWF19L2Q2TBE0 894 aaKnown RBP19.47■□□□□ 0.71
SCN3B-202ENST00000392770 MAGEC2Q9UBF1 373 aaPredicted RBP19.47■□□□□ 0.71
SCN3B-202ENST00000392770 UBAP1LF5GYI3 381 aa19.47■□□□□ 0.71
SCN3B-202ENST00000392770 DDB1Q16531 1140 aa19.47■□□□□ 0.71
SCN3B-202ENST00000392770 PA2G4Q9UQ80 394 aaKnown RBP19.47■□□□□ 0.71
SCN3B-202ENST00000392770 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
SCN3B-202ENST00000392770 KRT18P05783 430 aaKnown RBP19.47■□□□□ 0.71
SCN3B-202ENST00000392770 C8orf34Q49A92 452 aa19.47■□□□□ 0.71
SCN3B-202ENST00000392770 TET3O43151 1660 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 MPHOSPH10O00566 681 aaKnown RBP19.46■□□□□ 0.71
SCN3B-202ENST00000392770 CCDC152Q4G0S7 254 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 FILIP1LQ4L180 1135 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 TNPO1Q92973 898 aaKnown RBP19.46■□□□□ 0.71
SCN3B-202ENST00000392770 C8orf37Q96NL8 207 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 INSRP06213 1382 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 RFC4P35249 363 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 NAP1L1P55209 391 aaKnown RBP19.46■□□□□ 0.71
SCN3B-202ENST00000392770 LMBR1LQ6UX01 489 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 DACH1Q9UI36 760 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 SIRT1Q96EB6 747 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 ARHGEF10O15013 1369 aa19.46■□□□□ 0.71
SCN3B-202ENST00000392770 SOS1Q07889 1333 aaPredicted RBP19.45■□□□□ 0.7
SCN3B-202ENST00000392770 IQGAP3Q86VI3 1631 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 DDX46Q7L014 1031 aaKnown RBP19.45■□□□□ 0.7
SCN3B-202ENST00000392770 MKNK2Q9HBH9 465 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 ZNF287Q9HBT7 754 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 DCTPP1Q9H773 170 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 BRPF1P55201 1214 aaPredicted RBP19.45■□□□□ 0.7
SCN3B-202ENST00000392770 LINS1Q8NG48 757 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 SLC12A7Q9Y666 1083 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 SERPINC1P01008 464 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 G2E3Q7L622 706 aa19.45■□□□□ 0.7
SCN3B-202ENST00000392770 RANBP6O60518 1105 aaKnown RBP19.44■□□□□ 0.7
SCN3B-202ENST00000392770 PRDM15P57071 1507 aaPredicted RBP19.44■□□□□ 0.7
SCN3B-202ENST00000392770 SYCE3A1L190 88 aa19.44■□□□□ 0.7
SCN3B-202ENST00000392770 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
SCN3B-202ENST00000392770 CCT2P78371 535 aaKnown RBP19.44■□□□□ 0.7
SCN3B-202ENST00000392770 ESYT1Q9BSJ8 1104 aa19.44■□□□□ 0.7
SCN3B-202ENST00000392770 GJB2P29033 226 aa19.44■□□□□ 0.7
SCN3B-202ENST00000392770 CAMK4Q16566 473 aa19.44■□□□□ 0.7
SCN3B-202ENST00000392770 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
SCN3B-202ENST00000392770 GOLGA8BA8MQT2 603 aa19.43■□□□□ 0.7
SCN3B-202ENST00000392770 GUCY1B3Q02153 619 aa19.43■□□□□ 0.7
SCN3B-202ENST00000392770 ZBTB7BO15156 539 aaPredicted RBP19.43■□□□□ 0.7
SCN3B-202ENST00000392770 HSP90AA2PQ14568 343 aaPredicted RBP19.43■□□□□ 0.7
SCN3B-202ENST00000392770 HMG20BQ9P0W2 317 aa19.43■□□□□ 0.7
SCN3B-202ENST00000392770 METP08581 1390 aa19.43■□□□□ 0.7
SCN3B-202ENST00000392770 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
SCN3B-202ENST00000392770 NBPF5PQ86XG9 351 aaPredicted RBP19.43■□□□□ 0.7
SCN3B-202ENST00000392770 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
SCN3B-202ENST00000392770 RNF41Q9H4P4 317 aaPredicted RBP19.43■□□□□ 0.7
SCN3B-202ENST00000392770 R3HCC1Q9Y3T6 440 aaKnown RBP19.43■□□□□ 0.7
SCN3B-202ENST00000392770 C8orf76Q96K31 380 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 NEK1Q96PY6 1258 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 CROCC2H7BZ55 1655 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 SBNO2Q9Y2G9 1366 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 UQCRFS1P1P0C7P4 283 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 BTG4Q9NY30 223 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 CEP131Q9UPN4 1083 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 HAND2P61296 217 aa19.42■□□□□ 0.7
SCN3B-202ENST00000392770 IFIT3O14879 490 aaKnown RBP19.42■□□□□ 0.7
SCN3B-202ENST00000392770 DDX17Q92841 729 aaKnown RBP19.42■□□□□ 0.7
SCN3B-202ENST00000392770 BCL11BQ9C0K0 894 aaPredicted RBP19.42■□□□□ 0.7
SCN3B-202ENST00000392770 DZIP3Q86Y13 1208 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms