RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 MCTP1Q6DN14 999 aa22.4■■□□□ 1.18
TRAF3-203ENST00000392745 KIAA1211Q6ZU35 1233 aa22.4■■□□□ 1.18
TRAF3-203ENST00000392745 ERVV-2B6SEH9 535 aa22.4■■□□□ 1.18
TRAF3-203ENST00000392745 ZSCAN30Q86W11 494 aa22.4■■□□□ 1.18
TRAF3-203ENST00000392745 IBTKQ9P2D0 1353 aaPredicted RBP22.4■■□□□ 1.18
TRAF3-203ENST00000392745 TPM2P07951 284 aa22.39■■□□□ 1.18
TRAF3-203ENST00000392745 ZMYND15Q9H091 742 aa22.39■■□□□ 1.18
TRAF3-203ENST00000392745 PKNOX2Q96KN3 472 aa22.39■■□□□ 1.17
TRAF3-203ENST00000392745 COL22A1Q8NFW1 1626 aaPredicted RBP22.38■■□□□ 1.17
TRAF3-203ENST00000392745 PIP4K2AP48426 406 aaPredicted RBP22.38■■□□□ 1.17
TRAF3-203ENST00000392745 PKP1Q13835 747 aa22.38■■□□□ 1.17
TRAF3-203ENST00000392745 CWF19L2Q2TBE0 894 aaKnown RBP22.38■■□□□ 1.17
TRAF3-203ENST00000392745 LRP10Q7Z4F1 713 aa22.38■■□□□ 1.17
TRAF3-203ENST00000392745 ANP32BQ92688 251 aaKnown RBP22.38■■□□□ 1.17
TRAF3-203ENST00000392745 COL14A1Q05707 1796 aaKnown RBP22.38■■□□□ 1.17
TRAF3-203ENST00000392745 GLI3P10071 1580 aa22.37■■□□□ 1.17
TRAF3-203ENST00000392745 NCLP19338 710 aaKnown RBP22.37■■□□□ 1.17
TRAF3-203ENST00000392745 CAVIN1Q6NZI2 390 aaKnown RBP22.37■■□□□ 1.17
TRAF3-203ENST00000392745 COL16A1Q07092 1604 aaPredicted RBP22.37■■□□□ 1.17
TRAF3-203ENST00000392745 RABEP1Q15276 862 aa22.37■■□□□ 1.17
TRAF3-203ENST00000392745 SSH3Q8TE77 659 aa22.37■■□□□ 1.17
TRAF3-203ENST00000392745 COPS6Q7L5N1 327 aa22.36■■□□□ 1.17
TRAF3-203ENST00000392745 PPP1R42Q7Z4L9 355 aa22.36■■□□□ 1.17
TRAF3-203ENST00000392745 XAGE3Q8WTP9 111 aa22.36■■□□□ 1.17
TRAF3-203ENST00000392745 ALDH1L1O75891 902 aa22.36■■□□□ 1.17
TRAF3-203ENST00000392745 DDX58O95786 925 aaKnown RBP22.36■■□□□ 1.17
TRAF3-203ENST00000392745 ZNF445P59923 1031 aa22.35■■□□□ 1.17
TRAF3-203ENST00000392745 LMBRD1Q9NUN5 540 aa22.35■■□□□ 1.17
TRAF3-203ENST00000392745 ZSCAN23Q3MJ62 389 aa22.35■■□□□ 1.17
TRAF3-203ENST00000392745 TTC22Q5TAA0 569 aa22.35■■□□□ 1.17
TRAF3-203ENST00000392745 CYP2E1P05181 493 aaPredicted RBP22.34■■□□□ 1.17
TRAF3-203ENST00000392745 USP26Q9BXU7 913 aa22.34■■□□□ 1.17
TRAF3-203ENST00000392745 MSNP26038 577 aaKnown RBP22.34■■□□□ 1.17
TRAF3-203ENST00000392745 POLA2Q14181 598 aa22.34■■□□□ 1.17
TRAF3-203ENST00000392745 RIC3Q7Z5B4 369 aa22.34■■□□□ 1.17
TRAF3-203ENST00000392745 LINS1Q8NG48 757 aa22.34■■□□□ 1.17
TRAF3-203ENST00000392745 OFD1O75665 1012 aa22.33■■□□□ 1.17
TRAF3-203ENST00000392745 C9orf78Q9NZ63 289 aaPredicted RBP22.33■■□□□ 1.17
TRAF3-203ENST00000392745 UBR2Q8IWV8 1755 aa22.33■■□□□ 1.16
TRAF3-203ENST00000392745 NUCB2P80303 420 aa22.33■■□□□ 1.16
TRAF3-203ENST00000392745 LRRCC1Q9C099 1032 aa22.33■■□□□ 1.16
TRAF3-203ENST00000392745 PHLPP1O60346 1717 aa22.32■■□□□ 1.16
TRAF3-203ENST00000392745 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
TRAF3-203ENST00000392745 SRGAP3O43295 1099 aa22.32■■□□□ 1.16
TRAF3-203ENST00000392745 IGKV5-2P06315 115 aa22.32■■□□□ 1.16
TRAF3-203ENST00000392745 RBSNQ9H1K0 784 aa22.32■■□□□ 1.16
TRAF3-203ENST00000392745 PTCD1O75127 700 aaKnown RBP22.31■■□□□ 1.16
TRAF3-203ENST00000392745 ADAMTS2O95450 1211 aa22.31■■□□□ 1.16
TRAF3-203ENST00000392745 ZGPATQ8N5A5 531 aaKnown RBP22.31■■□□□ 1.16
TRAF3-203ENST00000392745 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
TRAF3-203ENST00000392745 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
TRAF3-203ENST00000392745 PIP4K2BP78356 416 aa22.3■■□□□ 1.16
TRAF3-203ENST00000392745 ANKRD13DQ6ZTN6 518 aa22.3■■□□□ 1.16
TRAF3-203ENST00000392745 DISP2A7MBM2 1401 aa22.3■■□□□ 1.16
TRAF3-203ENST00000392745 PAPPAQ13219 1627 aa22.3■■□□□ 1.16
TRAF3-203ENST00000392745 SALL3Q9BXA9 1300 aa22.29■■□□□ 1.16
TRAF3-203ENST00000392745 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
TRAF3-203ENST00000392745 SURF6O75683 361 aaKnown RBP22.29■■□□□ 1.16
TRAF3-203ENST00000392745 PRIM1P49642 420 aaKnown RBP22.29■■□□□ 1.16
TRAF3-203ENST00000392745 PDE1AP54750 535 aa22.29■■□□□ 1.16
TRAF3-203ENST00000392745 NBPF14Q5TI25 921 aa22.29■■□□□ 1.16
TRAF3-203ENST00000392745 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
TRAF3-203ENST00000392745 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
TRAF3-203ENST00000392745 RBM27Q9P2N5 1060 aaKnown RBP22.29■■□□□ 1.16
TRAF3-203ENST00000392745 GRM8O00222 908 aa22.29■■□□□ 1.16
TRAF3-203ENST00000392745 METTL22Q9BUU2 404 aaPredicted RBP22.29■■□□□ 1.16
TRAF3-203ENST00000392745 OSBPL3Q9H4L5 887 aa22.29■■□□□ 1.16
TRAF3-203ENST00000392745 PRPF40AO75400 957 aaKnown RBP22.28■■□□□ 1.16
TRAF3-203ENST00000392745 KAZALD1Q96I82 304 aa22.28■■□□□ 1.16
TRAF3-203ENST00000392745 CHAMP1Q96JM3 812 aa22.28■■□□□ 1.16
TRAF3-203ENST00000392745 UTYO14607 1347 aa22.28■■□□□ 1.16
TRAF3-203ENST00000392745 GPT2Q8TD30 523 aa22.28■■□□□ 1.16
TRAF3-203ENST00000392745 MYD88Q99836 296 aa22.28■■□□□ 1.16
TRAF3-203ENST00000392745 KAT6BQ8WYB5 2073 aa22.27■■□□□ 1.16
TRAF3-203ENST00000392745 NEURL1BA8MQ27 555 aa22.27■■□□□ 1.16
TRAF3-203ENST00000392745 SDSP20132 328 aa22.27■■□□□ 1.16
TRAF3-203ENST00000392745 MTX1Q13505 466 aa22.27■■□□□ 1.16
TRAF3-203ENST00000392745 PDCL3Q9H2J4 239 aa22.27■■□□□ 1.16
TRAF3-203ENST00000392745 TMOD3Q9NYL9 352 aa22.27■■□□□ 1.16
TRAF3-203ENST00000392745 ZDHHC9Q9Y397 364 aa22.27■■□□□ 1.16
TRAF3-203ENST00000392745 TSHZ3Q63HK5 1081 aa22.26■■□□□ 1.15
TRAF3-203ENST00000392745 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.26■■□□□ 1.15
TRAF3-203ENST00000392745 TNS2Q63HR2 1409 aa22.26■■□□□ 1.15
TRAF3-203ENST00000392745 A1BGP04217 495 aa22.26■■□□□ 1.15
TRAF3-203ENST00000392745 PIGBQ92521 554 aa22.26■■□□□ 1.15
TRAF3-203ENST00000392745 SUCLG2Q96I99 432 aa22.26■■□□□ 1.15
TRAF3-203ENST00000392745 IL1RAPL2Q9NP60 686 aa22.26■■□□□ 1.15
TRAF3-203ENST00000392745 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.26■■□□□ 1.15
TRAF3-203ENST00000392745 TOM1O60784 492 aa22.25■■□□□ 1.15
TRAF3-203ENST00000392745 NEXNQ0ZGT2 675 aa22.25■■□□□ 1.15
TRAF3-203ENST00000392745 GCKRQ14397 625 aa22.25■■□□□ 1.15
TRAF3-203ENST00000392745 PDLIM2Q96JY6 352 aa22.25■■□□□ 1.15
TRAF3-203ENST00000392745 ASAP1Q9ULH1 1129 aa22.25■■□□□ 1.15
TRAF3-203ENST00000392745 ITGB4P16144 1822 aa22.25■■□□□ 1.15
TRAF3-203ENST00000392745 PLCH1Q4KWH8 1693 aa22.25■■□□□ 1.15
TRAF3-203ENST00000392745 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
TRAF3-203ENST00000392745 CWC22Q9HCG8 908 aaKnown RBP22.24■■□□□ 1.15
TRAF3-203ENST00000392745 NOL7Q9UMY1 257 aaKnown RBP22.24■■□□□ 1.15
TRAF3-203ENST00000392745 R3HCC1Q9Y3T6 440 aaKnown RBP22.24■■□□□ 1.15
TRAF3-203ENST00000392745 NUTM2BA6NNL0 878 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms