RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 RGL2O15211 777 aa19.11■□□□□ 0.65
SUMO1-203ENST00000392246 ALDH1L2Q3SY69 923 aa19.11■□□□□ 0.65
SUMO1-203ENST00000392246 PHAXQ9H814 394 aaKnown RBP19.11■□□□□ 0.65
SUMO1-203ENST00000392246 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
SUMO1-203ENST00000392246 CLEC4GQ6UXB4 293 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 ATF5Q9Y2D1 282 aaPredicted RBP19.1■□□□□ 0.65
SUMO1-203ENST00000392246 ZNF652Q9Y2D9 606 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 SCN7AQ01118 1682 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 FKBP8Q14318 412 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 MSL1Q68DK7 614 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 ANKRD13DQ6ZTN6 518 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 SSH1Q8WYL5 1049 aa19.1■□□□□ 0.65
SUMO1-203ENST00000392246 NUP98P52948 1817 aa19.09■□□□□ 0.65
SUMO1-203ENST00000392246 G2E3Q7L622 706 aa19.09■□□□□ 0.65
SUMO1-203ENST00000392246 ZBTB3Q9H5J0 574 aa19.09■□□□□ 0.65
SUMO1-203ENST00000392246 SPON1Q9HCB6 807 aa19.09■□□□□ 0.65
SUMO1-203ENST00000392246 DDX58O95786 925 aaKnown RBP19.08■□□□□ 0.64
SUMO1-203ENST00000392246 MRPL50Q8N5N7 158 aaKnown RBP19.08■□□□□ 0.64
SUMO1-203ENST00000392246 PLBD2Q8NHP8 589 aa19.08■□□□□ 0.64
SUMO1-203ENST00000392246 COL24A1Q17RW2 1714 aa19.08■□□□□ 0.64
SUMO1-203ENST00000392246 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
SUMO1-203ENST00000392246 FLIIQ13045 1269 aa19.07■□□□□ 0.64
SUMO1-203ENST00000392246 HLFQ16534 295 aa19.07■□□□□ 0.64
SUMO1-203ENST00000392246 GIGYF2Q6Y7W6 1299 aaKnown RBP19.07■□□□□ 0.64
SUMO1-203ENST00000392246 SMC4Q9NTJ3 1288 aa19.07■□□□□ 0.64
SUMO1-203ENST00000392246 POLD1P28340 1107 aa19.06■□□□□ 0.64
SUMO1-203ENST00000392246 RIC3Q7Z5B4 369 aa19.06■□□□□ 0.64
SUMO1-203ENST00000392246 BCL2L13Q9BXK5 485 aa19.06■□□□□ 0.64
SUMO1-203ENST00000392246 TM4SF1P30408 202 aa19.05■□□□□ 0.64
SUMO1-203ENST00000392246 TBC1D9BQ66K14 1250 aa19.05■□□□□ 0.64
SUMO1-203ENST00000392246 MMP10P09238 476 aa19.05■□□□□ 0.64
SUMO1-203ENST00000392246 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
SUMO1-203ENST00000392246 FKBP5Q13451 457 aaPredicted RBP19.05■□□□□ 0.64
SUMO1-203ENST00000392246 NFIXQ14938 502 aa19.05■□□□□ 0.64
SUMO1-203ENST00000392246 HSP90AB3PQ58FF7 597 aa19.05■□□□□ 0.64
SUMO1-203ENST00000392246 KSR2Q6VAB6 950 aa19.05■□□□□ 0.64
SUMO1-203ENST00000392246 PTGER2P43116 358 aa19.04■□□□□ 0.64
SUMO1-203ENST00000392246 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
SUMO1-203ENST00000392246 SETDB2Q96T68 719 aa19.04■□□□□ 0.64
SUMO1-203ENST00000392246 SGIP1Q9BQI5 828 aa19.04■□□□□ 0.64
SUMO1-203ENST00000392246 ARFGEF2Q9Y6D5 1785 aa19.03■□□□□ 0.64
SUMO1-203ENST00000392246 PI4KAP2A4QPH2 592 aa19.03■□□□□ 0.64
SUMO1-203ENST00000392246 PI4KAP1Q8N8J0 262 aa19.03■□□□□ 0.64
SUMO1-203ENST00000392246 NIP7Q9Y221 180 aaKnown RBP eCLIP19.03■□□□□ 0.64
SUMO1-203ENST00000392246 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
SUMO1-203ENST00000392246 TCIRG1Q13488 830 aa19.02■□□□□ 0.64
SUMO1-203ENST00000392246 MAP3K2Q9Y2U5 619 aa19.02■□□□□ 0.64
SUMO1-203ENST00000392246 PTPRCP08575 1304 aa19.02■□□□□ 0.64
SUMO1-203ENST00000392246 ATP10DQ9P241 1426 aa19.02■□□□□ 0.63
SUMO1-203ENST00000392246 ZNF34Q8IZ26 560 aa19.01■□□□□ 0.63
SUMO1-203ENST00000392246 ADCY9O60503 1353 aa19.01■□□□□ 0.63
SUMO1-203ENST00000392246 ANKRD36CQ5JPF3 1778 aa19.01■□□□□ 0.63
SUMO1-203ENST00000392246 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
SUMO1-203ENST00000392246 BCAR3O75815 825 aa19■□□□□ 0.63
SUMO1-203ENST00000392246 DDR1Q08345 913 aa19■□□□□ 0.63
SUMO1-203ENST00000392246 METTL22Q9BUU2 404 aaPredicted RBP19■□□□□ 0.63
SUMO1-203ENST00000392246 CARMIL3Q8ND23 1372 aa19■□□□□ 0.63
SUMO1-203ENST00000392246 GPTP24298 496 aa19■□□□□ 0.63
SUMO1-203ENST00000392246 DNAAF4Q8WXU2 420 aa19■□□□□ 0.63
SUMO1-203ENST00000392246 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
SUMO1-203ENST00000392246 KIF16BQ96L93 1317 aa18.99■□□□□ 0.63
SUMO1-203ENST00000392246 SERPINB2P05120 415 aa18.99■□□□□ 0.63
SUMO1-203ENST00000392246 NEXNQ0ZGT2 675 aa18.99■□□□□ 0.63
SUMO1-203ENST00000392246 PARP10Q53GL7 1025 aa18.99■□□□□ 0.63
SUMO1-203ENST00000392246 MYD88Q99836 296 aa18.99■□□□□ 0.63
SUMO1-203ENST00000392246 RCAN3Q9UKA8 241 aa18.99■□□□□ 0.63
SUMO1-203ENST00000392246 ISCA1Q9BUE6 129 aa18.98■□□□□ 0.63
SUMO1-203ENST00000392246 LRP5O75197 1615 aa18.98■□□□□ 0.63
SUMO1-203ENST00000392246 AFDNP55196 1824 aaKnown RBP18.98■□□□□ 0.63
SUMO1-203ENST00000392246 UBN2Q6ZU65 1347 aa18.97■□□□□ 0.63
SUMO1-203ENST00000392246 F6X3S4 739 aa18.97■□□□□ 0.63
SUMO1-203ENST00000392246 ATP5J2-PTCD1G3V325 749 aa18.97■□□□□ 0.63
SUMO1-203ENST00000392246 IPO8O15397 1037 aaKnown RBP18.97■□□□□ 0.63
SUMO1-203ENST00000392246 TRIM28Q13263 835 aaKnown RBP18.97■□□□□ 0.63
SUMO1-203ENST00000392246 TPTE2Q6XPS3 522 aa18.96■□□□□ 0.63
SUMO1-203ENST00000392246 PPP1R42Q7Z4L9 355 aa18.96■□□□□ 0.63
SUMO1-203ENST00000392246 NLRP10Q86W26 655 aa18.96■□□□□ 0.63
SUMO1-203ENST00000392246 NBPF5PQ86XG9 351 aaPredicted RBP18.96■□□□□ 0.63
SUMO1-203ENST00000392246 ARHGAP45Q92619 1136 aa18.96■□□□□ 0.63
SUMO1-203ENST00000392246 NYXQ9GZU5 481 aa18.96■□□□□ 0.63
SUMO1-203ENST00000392246 PPP1R1BQ9UD71 204 aaPredicted RBP18.96■□□□□ 0.63
SUMO1-203ENST00000392246 SUSD4Q5VX71 490 aa18.95■□□□□ 0.62
SUMO1-203ENST00000392246 API5Q9BZZ5 524 aaKnown RBP18.95■□□□□ 0.62
SUMO1-203ENST00000392246 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
SUMO1-203ENST00000392246 FAM177BA6PVY3 158 aa18.95■□□□□ 0.62
SUMO1-203ENST00000392246 NPHP1O15259 732 aa18.95■□□□□ 0.62
SUMO1-203ENST00000392246 CCDC191Q8NCU4 936 aa18.95■□□□□ 0.62
SUMO1-203ENST00000392246 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
SUMO1-203ENST00000392246 UTP14AQ9BVJ6 771 aaKnown RBP18.95■□□□□ 0.62
SUMO1-203ENST00000392246 IBTKQ9P2D0 1353 aaPredicted RBP18.94■□□□□ 0.62
SUMO1-203ENST00000392246 IGKV5-2P06315 115 aa18.94■□□□□ 0.62
SUMO1-203ENST00000392246 SLC4A10Q6U841 1118 aa18.94■□□□□ 0.62
SUMO1-203ENST00000392246 CNBD1Q8NA66 436 aa18.94■□□□□ 0.62
SUMO1-203ENST00000392246 LINS1Q8NG48 757 aa18.94■□□□□ 0.62
SUMO1-203ENST00000392246 GTF2E1P29083 439 aaPredicted RBP18.93■□□□□ 0.62
SUMO1-203ENST00000392246 ZKSCAN2Q63HK3 967 aa18.93■□□□□ 0.62
SUMO1-203ENST00000392246 PRR5LQ6MZQ0 368 aa18.93■□□□□ 0.62
SUMO1-203ENST00000392246 CWC25Q9NXE8 425 aaPredicted RBP18.93■□□□□ 0.62
SUMO1-203ENST00000392246 NEURL1BA8MQ27 555 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms