RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
NLRP3-205ENST00000391827 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
NLRP3-205ENST00000391827 GRM8O00222 908 aa13.09□□□□□ -0.31
NLRP3-205ENST00000391827 BRD1O95696 1058 aa13.09□□□□□ -0.31
NLRP3-205ENST00000391827 LMOD2Q6P5Q4 547 aa13.09□□□□□ -0.31
NLRP3-205ENST00000391827 NAP1L5Q96NT1 182 aaPredicted RBP13.09□□□□□ -0.31
NLRP3-205ENST00000391827 FGD1P98174 961 aa13.09□□□□□ -0.31
NLRP3-205ENST00000391827 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
NLRP3-205ENST00000391827 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
NLRP3-205ENST00000391827 MEGF6O75095 1541 aa13.08□□□□□ -0.32
NLRP3-205ENST00000391827 PHKG2P15735 406 aa13.08□□□□□ -0.32
NLRP3-205ENST00000391827 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
NLRP3-205ENST00000391827 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
NLRP3-205ENST00000391827 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
NLRP3-205ENST00000391827 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
NLRP3-205ENST00000391827 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
NLRP3-205ENST00000391827 RRAGDQ9NQL2 400 aaPredicted RBP13.08□□□□□ -0.32
NLRP3-205ENST00000391827 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
NLRP3-205ENST00000391827 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
NLRP3-205ENST00000391827 TNS3Q68CZ2 1445 aa13.07□□□□□ -0.32
NLRP3-205ENST00000391827 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
NLRP3-205ENST00000391827 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
NLRP3-205ENST00000391827 CWF19L2Q2TBE0 894 aaKnown RBP13.07□□□□□ -0.32
NLRP3-205ENST00000391827 COL15A1P39059 1388 aa13.07□□□□□ -0.32
NLRP3-205ENST00000391827 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
NLRP3-205ENST00000391827 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
NLRP3-205ENST00000391827 RUFY2Q8WXA3 655 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 KCNB2Q92953 911 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 TTC14Q96N46 770 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 ARXQ96QS3 562 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 CPDO75976 1380 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 ATF3P18847 181 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
NLRP3-205ENST00000391827 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 SNRKQ9NRH2 765 aa13.06□□□□□ -0.32
NLRP3-205ENST00000391827 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
NLRP3-205ENST00000391827 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
NLRP3-205ENST00000391827 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
NLRP3-205ENST00000391827 GLI3P10071 1580 aa13.05□□□□□ -0.32
NLRP3-205ENST00000391827 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
NLRP3-205ENST00000391827 KIAA1211Q6ZU35 1233 aa13.05□□□□□ -0.32
NLRP3-205ENST00000391827 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
NLRP3-205ENST00000391827 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
NLRP3-205ENST00000391827 BICC1Q9H694 974 aaKnown RBP13.05□□□□□ -0.32
NLRP3-205ENST00000391827 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
NLRP3-205ENST00000391827 ZSCAN23Q3MJ62 389 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 NLRP2Q9NX02 1062 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 NEURL1BA8MQ27 555 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 HIP1O00291 1037 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 SASH1O94885 1247 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 MBD3O95983 291 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 GPT2Q8TD30 523 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 METTL22Q9BUU2 404 aaPredicted RBP13.04□□□□□ -0.32
NLRP3-205ENST00000391827 DIAPH3Q9NSV4 1193 aa13.04□□□□□ -0.32
NLRP3-205ENST00000391827 PRPF40AO75400 957 aaKnown RBP13.03□□□□□ -0.32
NLRP3-205ENST00000391827 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
NLRP3-205ENST00000391827 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
NLRP3-205ENST00000391827 TM6SF1Q9BZW5 370 aa13.03□□□□□ -0.32
NLRP3-205ENST00000391827 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
NLRP3-205ENST00000391827 PDE4CQ08493 712 aa13.03□□□□□ -0.32
NLRP3-205ENST00000391827 GCKRQ14397 625 aa13.03□□□□□ -0.32
NLRP3-205ENST00000391827 CAVIN1Q6NZI2 390 aaKnown RBP13.03□□□□□ -0.32
NLRP3-205ENST00000391827 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
NLRP3-205ENST00000391827 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.32
NLRP3-205ENST00000391827 CLCN1P35523 988 aa13.02□□□□□ -0.32
NLRP3-205ENST00000391827 CCDC173Q0VFZ6 552 aa13.02□□□□□ -0.32
NLRP3-205ENST00000391827 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.32
NLRP3-205ENST00000391827 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.32
NLRP3-205ENST00000391827 AACSQ86V21 672 aa13.02□□□□□ -0.32
NLRP3-205ENST00000391827 NFATC2IPQ8NCF5 419 aa13.02□□□□□ -0.32
NLRP3-205ENST00000391827 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.32
NLRP3-205ENST00000391827 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
NLRP3-205ENST00000391827 SLC39A6Q13433 755 aa13.02□□□□□ -0.33
NLRP3-205ENST00000391827 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
NLRP3-205ENST00000391827 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
NLRP3-205ENST00000391827 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
NLRP3-205ENST00000391827 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.33
NLRP3-205ENST00000391827 XAGE3Q8WTP9 111 aa13.01□□□□□ -0.33
NLRP3-205ENST00000391827 EAF2Q96CJ1 260 aaPredicted RBP13.01□□□□□ -0.33
NLRP3-205ENST00000391827 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
NLRP3-205ENST00000391827 CYP27B1O15528 508 aa13.01□□□□□ -0.33
NLRP3-205ENST00000391827 AIMP1Q12904 312 aaKnown RBP13.01□□□□□ -0.33
NLRP3-205ENST00000391827 RPAP1Q9BWH6 1393 aaPredicted RBP13.01□□□□□ -0.33
NLRP3-205ENST00000391827 ARFGEF2Q9Y6D5 1785 aa13.01□□□□□ -0.33
NLRP3-205ENST00000391827 JCADQ9P266 1359 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 AK2P54819 239 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 VPS53Q5VIR6 699 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 COPS6Q7L5N1 327 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 TMEM87AQ8NBN3 555 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 COPRSQ9NQ92 184 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 ERBB4Q15303 1308 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 NECTIN1Q15223 517 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 RABL6Q3YEC7 729 aaPredicted RBP13□□□□□ -0.33
NLRP3-205ENST00000391827 RUFY3Q7L099 469 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms