RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SPOCK2Q92563 424 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 RNF25Q96BH1 459 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 SHISA4Q96DD7 197 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 DDX27Q96GQ7 796 aaKnown RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 TEPSINQ96N21 525 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 HHIPQ96QV1 700 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 BDH2Q9BUT1 245 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 KRTAP2-2Q9BYT5 123 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 IRF2BPLQ9H1B7 796 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 UNC93B1Q9H1C4 597 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 PCED1AQ9H1Q7 454 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF395Q9H8N7 513 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 AKTIPQ9H8T0 292 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 GPAMQ9HCL2 828 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 TIMMDC1Q9NPL8 285 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 PAK6Q9NQU5 681 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 EMILIN3Q9NT22 766 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 PIM2Q9P1W9 311 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 LEMD3Q9Y2U8 911 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 MAP4K5Q9Y4K4 846 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 WDR33Q9C0J8 1336 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 ZC3H12DA2A288 527 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 WDR64B1ANS9 1081 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 BNIP3LO60238 219 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 TRIM13O60858 407 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 LILRB5O75023 590 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 ADH1AP07327 375 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 CSB-PGBD3P0DP91 1061 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 MS4A1P11836 297 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 FOSL1P15407 271 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 HOXB6P17509 224 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 HOXA10P31260 410 aaPredicted RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 GPC1P35052 558 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 PTGIRP43119 386 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 MAGEA10P43363 369 aaPredicted RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 PCBP4P57723 403 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 KRTAP10-5P60370 271 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 KRTAP10-12P60413 245 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 TGFB2P61812 414 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 DHX9Q08211 1270 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 MAPK7Q13164 816 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 UBAP2LQ14157 1087 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 MFSD10Q14728 455 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 AGERQ15109 404 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 GRIK5Q16478 980 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 PTPRNQ16849 979 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 SWI5Q1ZZU3 235 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 UVSSAQ2YD98 709 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 KRTAP27-1Q3LI81 207 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 WDR44Q5JSH3 913 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 EFHC2Q5JST6 749 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 FAM182BQ5T319 152 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 LCE1CQ5T751 118 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 LCE1BQ5T7P3 118 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 LCE3AQ5TA76 89 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 NBPF14Q5TI25 921 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 TCERG1LQ5VWI1 586 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 FBXO31Q5XUX0 539 aaPredicted RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 DPY19L2P1Q6NXN4 242 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 FIGNL1Q6PIW4 674 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 CRIP3Q6Q6R5 217 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 ATG14Q6ZNE5 492 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 Q6ZS46 218 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 VASH1Q7L8A9 365 aaPredicted RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 STK11IPQ8N1F8 1099 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 PGBD3Q8N328 593 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 DTWD1Q8N5C7 304 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 NBPF15Q8N660 670 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 MARCH10Q8NA82 808 aaPredicted RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 FBXO15Q8NCQ5 510 aaPredicted RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 UTP4Q969X6 686 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 ZIC5Q96T25 663 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 C1QTNF2Q9BXJ5 285 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 XYLT2Q9H1B5 865 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 C7orf69Q9H7B7 122 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 CDHR5Q9HBB8 845 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 RC3H2Q9HBD1 1191 aaKnown RBP0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 ATG3Q9NT62 314 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 NDFIP2Q9NV92 336 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 KLF15Q9UIH9 416 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 FBXO3Q9UK99 471 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 PRR12Q9ULL5 1215 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 STARD13Q9Y3M8 1113 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 ADGRG1Q9Y653 693 aa0.18□□□□□ -2.38
TRAJ28-201ENST00000390509 NCKAP5LQ9HCH0 1330 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 KMT2DO14686 5537 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 MUC5ACP98088 5654 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 A0A1B0GTH6 734 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 HMX2A2RU54 273 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF503-AS2A6NEH8 195 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 OTOL1A6NHN0 477 aaPredicted RBP0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 ADARB2-AS1A8MUL3 147 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 ZBTB42B2RXF5 422 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 SPATA31C2B4DYI2 1134 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 F8W735 103 aaPredicted RBP0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 RFXAPO00287 272 aa0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 WASLO00401 505 aaPredicted RBP0.17□□□□□ -2.38
TRAJ28-201ENST00000390509 DPYSL4O14531 572 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms