RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 PDZRN3Q9UPQ7 1066 aa9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 KDM2BQ8NHM5 1336 aa9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 TM4SF1P30408 202 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 CHRNA5P30532 468 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 PDE6BP35913 854 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 EIF5P55010 431 aaKnown RBP9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 C2CD5Q86YS7 1000 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 RNF181Q9P0P0 153 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 TBC1D2BQ9UPU7 963 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 ANKRD36CQ5JPF3 1778 aa9.44□□□□□ -0.9
TRAV38-1-201ENST00000390464 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
TRAV38-1-201ENST00000390464 RALBP1Q15311 655 aa9.43□□□□□ -0.9
TRAV38-1-201ENST00000390464 TAF7Q15545 349 aaPredicted RBP9.43□□□□□ -0.9
TRAV38-1-201ENST00000390464 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
TRAV38-1-201ENST00000390464 TTLL6Q8N841 843 aa9.43□□□□□ -0.9
TRAV38-1-201ENST00000390464 ZNF622Q969S3 477 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAV38-1-201ENST00000390464 WDR90Q96KV7 1748 aa9.42□□□□□ -0.9
TRAV38-1-201ENST00000390464 A1BGP04217 495 aa9.42□□□□□ -0.9
TRAV38-1-201ENST00000390464 GTF2E1P29083 439 aaPredicted RBP9.42□□□□□ -0.9
TRAV38-1-201ENST00000390464 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAV38-1-201ENST00000390464 TBC1D9BQ66K14 1250 aa9.42□□□□□ -0.9
TRAV38-1-201ENST00000390464 SSUH2Q9Y2M2 353 aa9.42□□□□□ -0.9
TRAV38-1-201ENST00000390464 SLX4Q8IY92 1834 aa9.42□□□□□ -0.9
TRAV38-1-201ENST00000390464 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
TRAV38-1-201ENST00000390464 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
TRAV38-1-201ENST00000390464 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
TRAV38-1-201ENST00000390464 KIF6Q6ZMV9 814 aa9.41□□□□□ -0.9
TRAV38-1-201ENST00000390464 NBPF5PQ86XG9 351 aaPredicted RBP9.41□□□□□ -0.9
TRAV38-1-201ENST00000390464 BRIP1Q9BX63 1249 aa9.41□□□□□ -0.9
TRAV38-1-201ENST00000390464 MYBBP1AQ9BQG0 1328 aaKnown RBP9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 KCNQ3O43525 872 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 HSPA6P17066 643 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 LMNB1P20700 586 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 KCNA3P22001 575 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 CLEC4GQ6UXB4 293 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 CNKSR1Q969H4 720 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
TRAV38-1-201ENST00000390464 TOMM70O94826 608 aa9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 CAMTA2O94983 1202 aa9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 PIP4K2AP48426 406 aaPredicted RBP9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 PRR5LQ6MZQ0 368 aa9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 NIP7Q9Y221 180 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
TRAV38-1-201ENST00000390464 SCN4AP35499 1836 aa9.38□□□□□ -0.91
TRAV38-1-201ENST00000390464 RGL2O15211 777 aa9.38□□□□□ -0.91
TRAV38-1-201ENST00000390464 RASSF7Q02833 373 aa9.38□□□□□ -0.91
TRAV38-1-201ENST00000390464 DDX10Q13206 875 aaKnown RBP9.38□□□□□ -0.91
TRAV38-1-201ENST00000390464 NGEFQ8N5V2 710 aa9.38□□□□□ -0.91
TRAV38-1-201ENST00000390464 NYXQ9GZU5 481 aa9.38□□□□□ -0.91
TRAV38-1-201ENST00000390464 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
TRAV38-1-201ENST00000390464 LAMB2P55268 1798 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 FAM177BA6PVY3 158 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 KIF3CO14782 793 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 APLP1P51693 650 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 RIPK4P57078 832 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 DPY19L2Q6NUT2 758 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 TAOK3Q9H2K8 898 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 NMRK2Q9NPI5 230 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 MIS18AQ9NYP9 233 aa9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 RRP7AQ9Y3A4 280 aaKnown RBP9.37□□□□□ -0.91
TRAV38-1-201ENST00000390464 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 C21orf2O43822 256 aa9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 MYL6BP14649 208 aa9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 NPR1P16066 1061 aa9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 PRPF40BQ6NWY9 871 aaKnown RBP9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 PLEKHF1Q96S99 279 aa9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 TMX4Q9H1E5 349 aaPredicted RBP9.36□□□□□ -0.91
TRAV38-1-201ENST00000390464 FSTL1Q12841 308 aa9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 SMC1BQ8NDV3 1235 aa9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 RPGRQ92834 1020 aaKnown RBP9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 THUMPD2Q9BTF0 503 aaKnown RBP9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 RRAGCQ9HB90 399 aa9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
TRAV38-1-201ENST00000390464 MAP3K15Q6ZN16 1313 aa9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 ERVV-1B6SEH8 477 aa9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 SRGNP10124 158 aa9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 VEGFAP15692 232 aaPredicted RBP9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 ALDH1B1P30837 517 aa9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 EIF4A1P60842 406 aaKnown RBP9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 SPDYE1Q8NFV5 336 aaPredicted RBP9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 BABAM1Q9NWV8 329 aa9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 IBTKQ9P2D0 1353 aaPredicted RBP9.34□□□□□ -0.91
TRAV38-1-201ENST00000390464 CACNA1FO60840 1977 aa9.33□□□□□ -0.92
TRAV38-1-201ENST00000390464 LTBP3Q9NS15 1303 aa9.33□□□□□ -0.92
TRAV38-1-201ENST00000390464 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
TRAV38-1-201ENST00000390464 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms