RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 SOX11P35716 441 aa9.87□□□□□ -0.83
TRBV28-201ENST00000390400 Q3C1V9 767 aa9.87□□□□□ -0.83
TRBV28-201ENST00000390400 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
TRBV28-201ENST00000390400 TERF2IPQ9NYB0 399 aa9.87□□□□□ -0.83
TRBV28-201ENST00000390400 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
TRBV28-201ENST00000390400 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 ATG7O95352 703 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 CSB-PGBD3P0DP91 1061 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 DEKP35659 375 aaKnown RBP9.86□□□□□ -0.83
TRBV28-201ENST00000390400 DDX10Q13206 875 aaKnown RBP9.86□□□□□ -0.83
TRBV28-201ENST00000390400 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
TRBV28-201ENST00000390400 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
TRBV28-201ENST00000390400 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 ORAI2Q96SN7 254 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 FKBPLQ9UIM3 349 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 HPS5Q9UPZ3 1129 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 ANKRD36BQ8N2N9 1353 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 AKAP12Q02952 1782 aa9.86□□□□□ -0.83
TRBV28-201ENST00000390400 SOWAHBA6NEL2 793 aa9.85□□□□□ -0.83
TRBV28-201ENST00000390400 ATP9BO43861 1147 aa9.85□□□□□ -0.83
TRBV28-201ENST00000390400 FAM160A2Q8N612 972 aaPredicted RBP9.85□□□□□ -0.83
TRBV28-201ENST00000390400 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
TRBV28-201ENST00000390400 PANK3Q9H999 370 aa9.85□□□□□ -0.83
TRBV28-201ENST00000390400 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
TRBV28-201ENST00000390400 POLR3AO14802 1390 aaPredicted RBP9.85□□□□□ -0.83
TRBV28-201ENST00000390400 CD163L1Q9NR16 1453 aa9.85□□□□□ -0.83
TRBV28-201ENST00000390400 ACEP12821 1306 aa9.84□□□□□ -0.83
TRBV28-201ENST00000390400 ZBBXA8MT70 800 aa9.84□□□□□ -0.83
TRBV28-201ENST00000390400 BRD1O95696 1058 aa9.84□□□□□ -0.83
TRBV28-201ENST00000390400 JUNDP17535 347 aa9.84□□□□□ -0.83
TRBV28-201ENST00000390400 MFAP1P55081 439 aaKnown RBP9.84□□□□□ -0.83
TRBV28-201ENST00000390400 BRINP3Q76B58 766 aa9.84□□□□□ -0.83
TRBV28-201ENST00000390400 A0A1W2PP64 1363 aa9.84□□□□□ -0.83
TRBV28-201ENST00000390400 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
TRBV28-201ENST00000390400 MON2Q7Z3U7 1717 aa9.84□□□□□ -0.83
TRBV28-201ENST00000390400 CPSF1Q10570 1443 aaKnown RBP9.83□□□□□ -0.84
TRBV28-201ENST00000390400 NSD3Q9BZ95 1437 aa9.83□□□□□ -0.84
TRBV28-201ENST00000390400 PPP4CP60510 307 aa9.83□□□□□ -0.84
TRBV28-201ENST00000390400 TMCO4Q5TGY1 634 aa9.83□□□□□ -0.84
TRBV28-201ENST00000390400 PRDM9Q9NQV7 894 aa9.83□□□□□ -0.84
TRBV28-201ENST00000390400 ZMIZ1Q9ULJ6 1067 aa9.83□□□□□ -0.84
TRBV28-201ENST00000390400 ROBO1Q9Y6N7 1651 aa9.83□□□□□ -0.84
TRBV28-201ENST00000390400 NPHP3Q7Z494 1330 aa9.82□□□□□ -0.84
TRBV28-201ENST00000390400 USP6P35125 1406 aa9.82□□□□□ -0.84
TRBV28-201ENST00000390400 FOXO3O43524 673 aa9.82□□□□□ -0.84
TRBV28-201ENST00000390400 PIP4K2BP78356 416 aa9.82□□□□□ -0.84
TRBV28-201ENST00000390400 PSME1Q06323 249 aa9.82□□□□□ -0.84
TRBV28-201ENST00000390400 FAM163AQ96GL9 167 aaPredicted RBP9.82□□□□□ -0.84
TRBV28-201ENST00000390400 NOP58Q9Y2X3 529 aaKnown RBP9.82□□□□□ -0.84
TRBV28-201ENST00000390400 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
TRBV28-201ENST00000390400 BRD4O60885 1362 aaPredicted RBP9.81□□□□□ -0.84
TRBV28-201ENST00000390400 FOXD4L5Q5VV16 416 aaPredicted RBP9.81□□□□□ -0.84
TRBV28-201ENST00000390400 STK32AQ8WU08 396 aa9.81□□□□□ -0.84
TRBV28-201ENST00000390400 UBE2Q2Q8WVN8 375 aa9.81□□□□□ -0.84
TRBV28-201ENST00000390400 FOXD4L4Q8WXT5 416 aaPredicted RBP9.81□□□□□ -0.84
TRBV28-201ENST00000390400 ZNF428Q96B54 188 aa9.81□□□□□ -0.84
TRBV28-201ENST00000390400 CARD14Q9BXL6 1004 aa9.81□□□□□ -0.84
TRBV28-201ENST00000390400 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
TRBV28-201ENST00000390400 KNSTRNQ9Y448 316 aa9.81□□□□□ -0.84
TRBV28-201ENST00000390400 PCDHB3Q9Y5E6 796 aa9.81□□□□□ -0.84
TRBV28-201ENST00000390400 NRKQ7Z2Y5 1582 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 FMNL1O95466 1100 aaPredicted RBP9.8□□□□□ -0.84
TRBV28-201ENST00000390400 XPCQ01831 940 aaPredicted RBP9.8□□□□□ -0.84
TRBV28-201ENST00000390400 KCNA1Q09470 495 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 PTPRNQ16849 979 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 KRT28Q7Z3Y7 464 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 DEPDC4Q8N2C3 294 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
TRBV28-201ENST00000390400 NHSL1Q5SYE7 1610 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 CGNL1Q0VF96 1302 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 TTC21AQ8NDW8 1320 aa9.8□□□□□ -0.84
TRBV28-201ENST00000390400 PXDNQ92626 1479 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 SBNO1A3KN83 1393 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 AHDC1Q5TGY3 1603 aaPredicted RBP9.79□□□□□ -0.84
TRBV28-201ENST00000390400 TSGA10IPQ3SY00 556 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRBV28-201ENST00000390400 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 DDX17Q92841 729 aaKnown RBP9.79□□□□□ -0.84
TRBV28-201ENST00000390400 IVNS1ABPQ9Y6Y0 642 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 SSH2Q76I76 1423 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 KIF20BQ96Q89 1820 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 TTC21BQ7Z4L5 1316 aa9.79□□□□□ -0.84
TRBV28-201ENST00000390400 TRPM3Q9HCF6 1732 aaPredicted RBP9.79□□□□□ -0.84
TRBV28-201ENST00000390400 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
TRBV28-201ENST00000390400 SKIP12755 728 aa9.78□□□□□ -0.84
TRBV28-201ENST00000390400 TMEM164Q5U3C3 297 aa9.78□□□□□ -0.84
TRBV28-201ENST00000390400 ANKRD13DQ6ZTN6 518 aa9.78□□□□□ -0.84
TRBV28-201ENST00000390400 PHTF2Q8N3S3 785 aa9.78□□□□□ -0.84
TRBV28-201ENST00000390400 PHLPP1O60346 1717 aa9.78□□□□□ -0.84
TRBV28-201ENST00000390400 NSD2O96028 1365 aa9.77□□□□□ -0.84
TRBV28-201ENST00000390400 NPC1L1Q9UHC9 1359 aa9.77□□□□□ -0.84
TRBV28-201ENST00000390400 TNS3Q68CZ2 1445 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 USP17L3A6NCW0 530 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 USP17L4A6NCW7 530 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 CTHP32929 405 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 ANP32AP39687 249 aaKnown RBP9.77□□□□□ -0.85
TRBV28-201ENST00000390400 PDE4CQ08493 712 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 PHLDB3Q6NSJ2 640 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms