RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MASTLQ96GX5 879 aa13.14□□□□□ -0.31
IFT88-203ENST00000389373 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
IFT88-203ENST00000389373 ZNF277Q9NRM2 450 aaPredicted RBP13.14□□□□□ -0.31
IFT88-203ENST00000389373 SCN11AQ9UI33 1791 aa13.13□□□□□ -0.31
IFT88-203ENST00000389373 SRGNP10124 158 aa13.13□□□□□ -0.31
IFT88-203ENST00000389373 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
IFT88-203ENST00000389373 CCDC93Q567U6 631 aa13.13□□□□□ -0.31
IFT88-203ENST00000389373 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
IFT88-203ENST00000389373 DICER1Q9UPY3 1922 aaKnown RBP13.12□□□□□ -0.31
IFT88-203ENST00000389373 RASSF10A6NK89 507 aa13.12□□□□□ -0.31
IFT88-203ENST00000389373 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
IFT88-203ENST00000389373 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
IFT88-203ENST00000389373 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
IFT88-203ENST00000389373 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
IFT88-203ENST00000389373 A1BGP04217 495 aa13.11□□□□□ -0.31
IFT88-203ENST00000389373 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
IFT88-203ENST00000389373 PNMA8AQ86V59 439 aaPredicted RBP13.11□□□□□ -0.31
IFT88-203ENST00000389373 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
IFT88-203ENST00000389373 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
IFT88-203ENST00000389373 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
IFT88-203ENST00000389373 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
IFT88-203ENST00000389373 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
IFT88-203ENST00000389373 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
IFT88-203ENST00000389373 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
IFT88-203ENST00000389373 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
IFT88-203ENST00000389373 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
IFT88-203ENST00000389373 COL11A2P13942 1736 aaPredicted RBP13.09□□□□□ -0.31
IFT88-203ENST00000389373 FMR1Q06787 632 aaKnown RBP eCLIP13.09□□□□□ -0.31
IFT88-203ENST00000389373 TEFQ10587 303 aa13.09□□□□□ -0.31
IFT88-203ENST00000389373 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
IFT88-203ENST00000389373 SYNE4Q8N205 404 aa13.09□□□□□ -0.31
IFT88-203ENST00000389373 CAPNS2Q96L46 248 aa13.09□□□□□ -0.31
IFT88-203ENST00000389373 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
IFT88-203ENST00000389373 NPR1P16066 1061 aa13.08□□□□□ -0.32
IFT88-203ENST00000389373 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
IFT88-203ENST00000389373 CYP4F22Q6NT55 531 aa13.08□□□□□ -0.32
IFT88-203ENST00000389373 C7orf43Q8WVR3 580 aa13.08□□□□□ -0.32
IFT88-203ENST00000389373 GPR101Q96P66 508 aaPredicted RBP13.08□□□□□ -0.32
IFT88-203ENST00000389373 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
IFT88-203ENST00000389373 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
IFT88-203ENST00000389373 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
IFT88-203ENST00000389373 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
IFT88-203ENST00000389373 HEG1Q9ULI3 1381 aa13.07□□□□□ -0.32
IFT88-203ENST00000389373 SCN4AP35499 1836 aa13.07□□□□□ -0.32
IFT88-203ENST00000389373 IARSP41252 1262 aaKnown RBP13.07□□□□□ -0.32
IFT88-203ENST00000389373 ECE1P42892 770 aa13.07□□□□□ -0.32
IFT88-203ENST00000389373 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
IFT88-203ENST00000389373 RTKN2Q8IZC4 609 aa13.07□□□□□ -0.32
IFT88-203ENST00000389373 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
IFT88-203ENST00000389373 MRC1P22897 1456 aa13.07□□□□□ -0.32
IFT88-203ENST00000389373 CACNA1SQ13698 1873 aa13.07□□□□□ -0.32
IFT88-203ENST00000389373 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
IFT88-203ENST00000389373 RGS19P49795 217 aa13.06□□□□□ -0.32
IFT88-203ENST00000389373 EIF6P56537 245 aaKnown RBP13.06□□□□□ -0.32
IFT88-203ENST00000389373 JDP2Q8WYK2 163 aa13.06□□□□□ -0.32
IFT88-203ENST00000389373 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
IFT88-203ENST00000389373 FZD9O00144 591 aa13.05□□□□□ -0.32
IFT88-203ENST00000389373 AOC2O75106 756 aa13.05□□□□□ -0.32
IFT88-203ENST00000389373 GPC2Q8N158 579 aa13.05□□□□□ -0.32
IFT88-203ENST00000389373 TRAF5O00463 557 aa13.04□□□□□ -0.32
IFT88-203ENST00000389373 KCNQ3O43525 872 aa13.04□□□□□ -0.32
IFT88-203ENST00000389373 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
IFT88-203ENST00000389373 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
IFT88-203ENST00000389373 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
IFT88-203ENST00000389373 TPTE2Q6XPS3 522 aa13.04□□□□□ -0.32
IFT88-203ENST00000389373 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
IFT88-203ENST00000389373 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
IFT88-203ENST00000389373 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
IFT88-203ENST00000389373 EPS15P42566 896 aa13.03□□□□□ -0.32
IFT88-203ENST00000389373 MCOLN1Q9GZU1 580 aa13.03□□□□□ -0.32
IFT88-203ENST00000389373 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
IFT88-203ENST00000389373 ZNF652Q9Y2D9 606 aa13.03□□□□□ -0.32
IFT88-203ENST00000389373 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
IFT88-203ENST00000389373 SCN7AQ01118 1682 aa13.02□□□□□ -0.32
IFT88-203ENST00000389373 BTBD11A6QL63 1104 aa13.02□□□□□ -0.33
IFT88-203ENST00000389373 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.33
IFT88-203ENST00000389373 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.33
IFT88-203ENST00000389373 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
IFT88-203ENST00000389373 CST9Q5W186 159 aa13.02□□□□□ -0.33
IFT88-203ENST00000389373 PRAMEF22A3QJZ6 481 aa13.01□□□□□ -0.33
IFT88-203ENST00000389373 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
IFT88-203ENST00000389373 DGKZQ13574 1117 aa13.01□□□□□ -0.33
IFT88-203ENST00000389373 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
IFT88-203ENST00000389373 UBR2Q8IWV8 1755 aa13□□□□□ -0.33
IFT88-203ENST00000389373 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
IFT88-203ENST00000389373 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
IFT88-203ENST00000389373 MAP2K2P36507 400 aa13□□□□□ -0.33
IFT88-203ENST00000389373 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
IFT88-203ENST00000389373 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
IFT88-203ENST00000389373 TLL2Q9Y6L7 1015 aa13□□□□□ -0.33
IFT88-203ENST00000389373 CELF2O95319 508 aaKnown RBP12.99□□□□□ -0.33
IFT88-203ENST00000389373 SCNN1DP51172 638 aa12.99□□□□□ -0.33
IFT88-203ENST00000389373 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
IFT88-203ENST00000389373 PSMD1Q99460 953 aa12.99□□□□□ -0.33
IFT88-203ENST00000389373 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
IFT88-203ENST00000389373 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
IFT88-203ENST00000389373 NGEFQ8N5V2 710 aa12.98□□□□□ -0.33
IFT88-203ENST00000389373 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
IFT88-203ENST00000389373 HLFQ16534 295 aa12.97□□□□□ -0.33
IFT88-203ENST00000389373 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms