RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NFIXQ14938 502 aa2.02□□□□□ -2.09
RNU6-540P-201ENST00000384622 FLCNQ8NFG4 579 aa2.02□□□□□ -2.09
RNU6-540P-201ENST00000384622 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
RNU6-540P-201ENST00000384622 PARD6AQ9NPB6 346 aa2.02□□□□□ -2.09
RNU6-540P-201ENST00000384622 DNAAF2Q9NVR5 837 aaKnown RBP2.02□□□□□ -2.09
RNU6-540P-201ENST00000384622 ADH7P40394 386 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 CLN3Q13286 438 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 NLRP8Q86W28 1048 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 TRIM42Q8IWZ5 723 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 TNFRSF25Q93038 417 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 C7orf69Q9H7B7 122 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 JPH1Q9HDC5 661 aaPredicted RBP2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 MARK1Q9P0L2 795 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 PIM2Q9P1W9 311 aa2.01□□□□□ -2.09
RNU6-540P-201ENST00000384622 CNTNAP4Q9C0A0 1308 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 HMX2A2RU54 273 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 C1QTNF9P0C862 333 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 NBPF20Q3BBV1 942 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 SYDE1Q6ZW31 735 aaPredicted RBP2□□□□□ -2.09
RNU6-540P-201ENST00000384622 ZBTB33Q86T24 672 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 ATG4DQ86TL0 474 aaPredicted RBP2□□□□□ -2.09
RNU6-540P-201ENST00000384622 DTWD1Q8N5C7 304 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 SLC16A11Q8NCK7 471 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 SORCS2Q96PQ0 1159 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 ARHGAP9Q9BRR9 750 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 ZCCHC4Q9H5U6 513 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 SLITRK6Q9H5Y7 841 aa2□□□□□ -2.09
RNU6-540P-201ENST00000384622 WDR64B1ANS9 1081 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 NFIBO00712 420 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 GNPATO15228 680 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 CELA3BP08861 270 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 GLB1P16278 677 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 GTF2E1P29083 439 aaPredicted RBP1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 ZXDAP98168 799 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 MLANAQ16655 118 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 MSMPQ1L6U9 139 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 CRB2Q5IJ48 1285 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 GNASQ5JWF2 1037 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 CIAPIN1Q6FI81 312 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 CXorf38Q8TB03 319 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 NUDT8Q8WV74 236 aa1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 PAK6Q9NQU5 681 aaPredicted RBP1.99□□□□□ -2.09
RNU6-540P-201ENST00000384622 PITPNM2Q9BZ72 1349 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 NPIPB6E9PJ23 425 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 FSHBP01225 129 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 AFF1P51825 1210 aaKnown RBP1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 ZNF792Q3KQV3 632 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 TMEM130Q8N3G9 435 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 GPKOWQ92917 476 aaPredicted RBP eCLIP1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 STRN4Q9NRL3 753 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 WDR70Q9NW82 654 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 MYRFQ9Y2G1 1151 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 LEMD3Q9Y2U8 911 aa1.98□□□□□ -2.09
RNU6-540P-201ENST00000384622 F8W735 103 aaPredicted RBP1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 ONECUT2O95948 504 aa1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 FOSL1P15407 271 aa1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 BMP7P18075 431 aa1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 PLCL1Q15111 1095 aa1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 C4orf17Q53FE4 359 aa1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 TMEM214Q6NUQ4 689 aaKnown RBP1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 ILDR2Q71H61 639 aa1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 BSDC1Q9NW68 430 aaPredicted RBP1.97□□□□□ -2.09
RNU6-540P-201ENST00000384622 CFAP99D6REC4 459 aa1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 PER1O15534 1290 aaPredicted RBP1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 NDUFV2P19404 249 aa1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 CENPCQ03188 943 aa1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 ERICH6BQ5W0A0 696 aa1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 MSL1Q68DK7 614 aa1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 ARMC10Q8N2F6 343 aa1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 GIMAP7Q8NHV1 300 aa1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 UBL7Q96S82 380 aaPredicted RBP1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 MRPL18Q9H0U6 180 aaKnown RBP1.96□□□□□ -2.1
RNU6-540P-201ENST00000384622 GRIN3BO60391 1043 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 FAM157BP0CG42 384 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 HRCP23327 699 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 TBC1D9Q6ZT07 1266 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 GLIS3Q8NEA6 775 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 MRIQ9BWK5 157 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 ARHGEF10LQ9HCE6 1279 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 ATG3Q9NT62 314 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 TNFRSF18Q9Y5U5 241 aa1.95□□□□□ -2.1
RNU6-540P-201ENST00000384622 KRT1P04264 644 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 NEUROD1Q13562 356 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 KCNA10Q16322 511 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 ARSJQ5FYB0 599 aaPredicted RBP1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 PDXDC2PQ6P474 469 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 Q6ZS46 218 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 CLEC10AQ8IUN9 316 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 AGGF1Q8N302 714 aaeCLIP1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 UTP4Q969X6 686 aaKnown RBP1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 GPR20Q99678 358 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 RTEL1Q9NZ71 1219 aa1.94□□□□□ -2.1
RNU6-540P-201ENST00000384622 A0A1W2PNR3 127 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 DLL1O00548 723 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 NUAK1O60285 661 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 RTN1Q16799 776 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 SPATS1Q496A3 300 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 CRTC2Q53ET0 693 aaPredicted RBP1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 CYP2U1Q7Z449 544 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms