RNA–Protein interactions for RNA: ENST00000382543.3

AFAP1-203, Transcript of actin filament associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene AFAP1, Length 2,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1-203ENST00000382543 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
AFAP1-203ENST00000382543 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 SGSM2O43147 1006 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 DDX58O95786 925 aaKnown RBP17.21■□□□□ 0.35
AFAP1-203ENST00000382543 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
AFAP1-203ENST00000382543 CPA1P15085 419 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 MTX1Q13505 466 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 GRPEL1Q9HAV7 217 aa17.21■□□□□ 0.35
AFAP1-203ENST00000382543 TLR7Q9NYK1 1049 aaKnown RBP17.21■□□□□ 0.35
AFAP1-203ENST00000382543 KIF1AQ12756 1690 aa17.21■□□□□ 0.34
AFAP1-203ENST00000382543 OVOS2A0A0G2JMS6 1433 aa17.2■□□□□ 0.34
AFAP1-203ENST00000382543 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
AFAP1-203ENST00000382543 RASEFQ8IZ41 740 aa17.2■□□□□ 0.34
AFAP1-203ENST00000382543 CWC22Q9HCG8 908 aaKnown RBP17.2■□□□□ 0.34
AFAP1-203ENST00000382543 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
AFAP1-203ENST00000382543 SASH1O94885 1247 aa17.2■□□□□ 0.34
AFAP1-203ENST00000382543 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
AFAP1-203ENST00000382543 HSPA4P34932 840 aa17.19■□□□□ 0.34
AFAP1-203ENST00000382543 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
AFAP1-203ENST00000382543 DDX54Q8TDD1 881 aaKnown RBP17.19■□□□□ 0.34
AFAP1-203ENST00000382543 C5P01031 1676 aa17.19■□□□□ 0.34
AFAP1-203ENST00000382543 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
AFAP1-203ENST00000382543 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
AFAP1-203ENST00000382543 SKOR2Q2VWA4 1001 aaPredicted RBP17.19■□□□□ 0.34
AFAP1-203ENST00000382543 CLEC17AQ6ZS10 378 aa17.19■□□□□ 0.34
AFAP1-203ENST00000382543 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
AFAP1-203ENST00000382543 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
AFAP1-203ENST00000382543 LSG1Q9H089 658 aaKnown RBP17.18■□□□□ 0.34
AFAP1-203ENST00000382543 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
AFAP1-203ENST00000382543 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
AFAP1-203ENST00000382543 MRE11P49959 708 aa17.18■□□□□ 0.34
AFAP1-203ENST00000382543 ANAPC15P60006 121 aa17.18■□□□□ 0.34
AFAP1-203ENST00000382543 DIAPH3Q9NSV4 1193 aa17.18■□□□□ 0.34
AFAP1-203ENST00000382543 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
AFAP1-203ENST00000382543 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
AFAP1-203ENST00000382543 PTH1RQ03431 593 aa17.17■□□□□ 0.34
AFAP1-203ENST00000382543 CAVIN1Q6NZI2 390 aaKnown RBP17.17■□□□□ 0.34
AFAP1-203ENST00000382543 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
AFAP1-203ENST00000382543 RAD50Q92878 1312 aa17.17■□□□□ 0.34
AFAP1-203ENST00000382543 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
AFAP1-203ENST00000382543 GCKRQ14397 625 aa17.17■□□□□ 0.34
AFAP1-203ENST00000382543 LARP1Q6PKG0 1096 aaKnown RBP17.17■□□□□ 0.34
AFAP1-203ENST00000382543 CABP4P57796 275 aa17.16■□□□□ 0.34
AFAP1-203ENST00000382543 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
AFAP1-203ENST00000382543 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
AFAP1-203ENST00000382543 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
AFAP1-203ENST00000382543 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
AFAP1-203ENST00000382543 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
AFAP1-203ENST00000382543 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
AFAP1-203ENST00000382543 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
AFAP1-203ENST00000382543 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
AFAP1-203ENST00000382543 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
AFAP1-203ENST00000382543 KLHL40Q2TBA0 621 aa17.15■□□□□ 0.34
AFAP1-203ENST00000382543 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
AFAP1-203ENST00000382543 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
AFAP1-203ENST00000382543 FAM227BQ96M60 508 aa17.15■□□□□ 0.34
AFAP1-203ENST00000382543 RRAGDQ9NQL2 400 aaPredicted RBP17.15■□□□□ 0.34
AFAP1-203ENST00000382543 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
AFAP1-203ENST00000382543 USP42Q9H9J4 1324 aaKnown RBP17.14■□□□□ 0.33
AFAP1-203ENST00000382543 CUL4AQ13619 759 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
AFAP1-203ENST00000382543 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
AFAP1-203ENST00000382543 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.33
AFAP1-203ENST00000382543 CCDC9Q9Y3X0 531 aaKnown RBP17.14■□□□□ 0.33
AFAP1-203ENST00000382543 NDUFB9Q9Y6M9 179 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 COL18A1P39060 1754 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 UTYO14607 1347 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 BRINP3Q76B58 766 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 ERC1Q8IUD2 1116 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
AFAP1-203ENST00000382543 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 MCM2P49736 904 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
AFAP1-203ENST00000382543 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 PTMSP20962 102 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
AFAP1-203ENST00000382543 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 GPATCH3Q96I76 525 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
AFAP1-203ENST00000382543 CASTP20810 708 aaKnown RBP17.12■□□□□ 0.33
AFAP1-203ENST00000382543 AK2P54819 239 aa17.12■□□□□ 0.33
AFAP1-203ENST00000382543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
AFAP1-203ENST00000382543 GDPD2Q9HCC8 539 aa17.12■□□□□ 0.33
AFAP1-203ENST00000382543 CHGBP05060 677 aa17.11■□□□□ 0.33
AFAP1-203ENST00000382543 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
AFAP1-203ENST00000382543 RUFY3Q7L099 469 aa17.11■□□□□ 0.33
AFAP1-203ENST00000382543 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
AFAP1-203ENST00000382543 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
AFAP1-203ENST00000382543 LARGE1O95461 756 aa17.1■□□□□ 0.33
AFAP1-203ENST00000382543 BRD1O95696 1058 aa17.1■□□□□ 0.33
AFAP1-203ENST00000382543 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
AFAP1-203ENST00000382543 A0A087WZG4 1122 aa17.1■□□□□ 0.33
AFAP1-203ENST00000382543 ZSCAN23Q3MJ62 389 aa17.1■□□□□ 0.33
AFAP1-203ENST00000382543 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms