RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 MYOM2P54296 1465 aa17.67■□□□□ 0.42
VLDLR-202ENST00000382099 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
VLDLR-202ENST00000382099 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
VLDLR-202ENST00000382099 IQSEC2Q5JU85 1478 aa17.66■□□□□ 0.42
VLDLR-202ENST00000382099 IVLP07476 585 aa17.66■□□□□ 0.42
VLDLR-202ENST00000382099 CCAR2Q8N163 923 aaKnown RBP17.66■□□□□ 0.42
VLDLR-202ENST00000382099 ZNF526Q8TF50 670 aaPredicted RBP17.66■□□□□ 0.42
VLDLR-202ENST00000382099 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.66■□□□□ 0.42
VLDLR-202ENST00000382099 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
VLDLR-202ENST00000382099 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
VLDLR-202ENST00000382099 PLEKHA4Q9H4M7 779 aa17.66■□□□□ 0.42
VLDLR-202ENST00000382099 VPS18Q9P253 973 aa17.66■□□□□ 0.42
VLDLR-202ENST00000382099 NSD3Q9BZ95 1437 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 SYT1P21579 422 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 TSHZ3Q63HK5 1081 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 TMEM87AQ8NBN3 555 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 MYO3AQ8NEV4 1616 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 CFAP65Q6ZU64 1925 aaKnown RBP17.65■□□□□ 0.42
VLDLR-202ENST00000382099 URI1O94763 535 aaPredicted RBP17.65■□□□□ 0.42
VLDLR-202ENST00000382099 F13A1P00488 732 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 FBXW7Q969H0 707 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
VLDLR-202ENST00000382099 PLA2G4DQ86XP0 818 aa17.64■□□□□ 0.42
VLDLR-202ENST00000382099 ATP7AQ04656 1500 aa17.64■□□□□ 0.41
VLDLR-202ENST00000382099 KIF2AO00139 706 aaPredicted RBP17.64■□□□□ 0.41
VLDLR-202ENST00000382099 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
VLDLR-202ENST00000382099 NEURL4Q96JN8 1562 aa17.64■□□□□ 0.41
VLDLR-202ENST00000382099 INO80Q9ULG1 1556 aaPredicted RBP17.64■□□□□ 0.41
VLDLR-202ENST00000382099 LIG1P18858 919 aa17.64■□□□□ 0.41
VLDLR-202ENST00000382099 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.64■□□□□ 0.41
VLDLR-202ENST00000382099 REXO1L1PQ8IX06 675 aa17.64■□□□□ 0.41
VLDLR-202ENST00000382099 BECN2A8MW95 431 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 SASH3O75995 380 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 ZRANB2O95218 330 aaKnown RBP eCLIP17.63■□□□□ 0.41
VLDLR-202ENST00000382099 LRCH2Q5VUJ6 765 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 FERMT3Q86UX7 667 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 FAM177A1Q8N128 213 aaPredicted RBP17.63■□□□□ 0.41
VLDLR-202ENST00000382099 DACT1Q9NYF0 836 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 DNAI1Q9UI46 699 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 RPAINQ86UA6 219 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 ORC3Q9UBD5 711 aaPredicted RBP17.63■□□□□ 0.41
VLDLR-202ENST00000382099 TCHHQ07283 1943 aa17.63■□□□□ 0.41
VLDLR-202ENST00000382099 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
VLDLR-202ENST00000382099 CWC27Q6UX04 472 aaKnown RBP17.62■□□□□ 0.41
VLDLR-202ENST00000382099 KIF1BO60333 1816 aa17.62■□□□□ 0.41
VLDLR-202ENST00000382099 KANK1Q14678 1352 aa17.62■□□□□ 0.41
VLDLR-202ENST00000382099 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
VLDLR-202ENST00000382099 EXOC4Q96A65 974 aa17.62■□□□□ 0.41
VLDLR-202ENST00000382099 CARD6Q9BX69 1037 aa17.62■□□□□ 0.41
VLDLR-202ENST00000382099 ZRSR1Q15695 479 aaKnown RBP17.62■□□□□ 0.41
VLDLR-202ENST00000382099 MMS22LQ6ZRQ5 1243 aa17.62■□□□□ 0.41
VLDLR-202ENST00000382099 RNF217Q8TC41 542 aa17.62■□□□□ 0.41
VLDLR-202ENST00000382099 FAM43BQ6ZT52 329 aaPredicted RBP17.61■□□□□ 0.41
VLDLR-202ENST00000382099 NRXN1Q9ULB1 1477 aa17.61■□□□□ 0.41
VLDLR-202ENST00000382099 NEMFO60524 1076 aa17.61■□□□□ 0.41
VLDLR-202ENST00000382099 FAM173BQ6P4H8 233 aa17.61■□□□□ 0.41
VLDLR-202ENST00000382099 ARFGAP3Q9NP61 516 aa17.61■□□□□ 0.41
VLDLR-202ENST00000382099 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
VLDLR-202ENST00000382099 MCM6Q14566 821 aa17.6■□□□□ 0.41
VLDLR-202ENST00000382099 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
VLDLR-202ENST00000382099 EVCP57679 992 aa17.6■□□□□ 0.41
VLDLR-202ENST00000382099 KIF1CO43896 1103 aaKnown RBP17.6■□□□□ 0.41
VLDLR-202ENST00000382099 TBC1D8O95759 1140 aa17.6■□□□□ 0.41
VLDLR-202ENST00000382099 IBSPP21815 317 aaPredicted RBP17.59■□□□□ 0.41
VLDLR-202ENST00000382099 BICD2Q8TD16 824 aa17.59■□□□□ 0.41
VLDLR-202ENST00000382099 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
VLDLR-202ENST00000382099 UHRF1BP1LA0JNW5 1464 aa17.59■□□□□ 0.41
VLDLR-202ENST00000382099 NOS1P29475 1434 aa17.59■□□□□ 0.41
VLDLR-202ENST00000382099 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
VLDLR-202ENST00000382099 SBNO2Q9Y2G9 1366 aa17.59■□□□□ 0.41
VLDLR-202ENST00000382099 SMC2O95347 1197 aa17.59■□□□□ 0.41
VLDLR-202ENST00000382099 ABCC11Q96J66 1382 aa17.58■□□□□ 0.41
VLDLR-202ENST00000382099 PHACTR2O75167 634 aa17.58■□□□□ 0.41
VLDLR-202ENST00000382099 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.41
VLDLR-202ENST00000382099 DCTPP1Q9H773 170 aa17.58■□□□□ 0.41
VLDLR-202ENST00000382099 PPRC1Q5VV67 1664 aaKnown RBP17.58■□□□□ 0.4
VLDLR-202ENST00000382099 BIRC2Q13490 618 aa17.58■□□□□ 0.4
VLDLR-202ENST00000382099 MED4Q9NPJ6 270 aa17.58■□□□□ 0.4
VLDLR-202ENST00000382099 ELP1O95163 1332 aa17.58■□□□□ 0.4
VLDLR-202ENST00000382099 ISM2Q6H9L7 571 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 QRICH2Q9H0J4 1663 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 EFCAB6Q5THR3 1501 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 CC2D1AQ6P1N0 951 aaPredicted RBP17.57■□□□□ 0.4
VLDLR-202ENST00000382099 TFIP11Q9UBB9 837 aaKnown RBP17.57■□□□□ 0.4
VLDLR-202ENST00000382099 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 ZNF518AQ6AHZ1 1483 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 CCDC83Q8IWF9 413 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
VLDLR-202ENST00000382099 L2HGDHQ9H9P8 463 aa17.57■□□□□ 0.4
VLDLR-202ENST00000382099 CCZ1BP86790 482 aa17.56■□□□□ 0.4
VLDLR-202ENST00000382099 CCZ1P86791 482 aaPredicted RBP17.56■□□□□ 0.4
VLDLR-202ENST00000382099 FANCAO15360 1455 aa17.56■□□□□ 0.4
VLDLR-202ENST00000382099 H3BQF6 201 aa17.56■□□□□ 0.4
VLDLR-202ENST00000382099 ALDH1L2Q3SY69 923 aa17.56■□□□□ 0.4
VLDLR-202ENST00000382099 GIMAP7Q8NHV1 300 aa17.56■□□□□ 0.4
VLDLR-202ENST00000382099 ABCA9Q8IUA7 1624 aa17.56■□□□□ 0.4
VLDLR-202ENST00000382099 NRDCO43847 1150 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 SGSM3Q96HU1 749 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 PPP1R13BQ96KQ4 1090 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms