RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 NPHP1O15259 732 aa17.17■□□□□ 0.34
RPAIN-202ENST00000381208 HSPA6P17066 643 aa17.17■□□□□ 0.34
RPAIN-202ENST00000381208 DCTN1Q14203 1278 aa17.17■□□□□ 0.34
RPAIN-202ENST00000381208 RNF181Q9P0P0 153 aa17.17■□□□□ 0.34
RPAIN-202ENST00000381208 TOMM70O94826 608 aa17.16■□□□□ 0.34
RPAIN-202ENST00000381208 ST5P78524 1137 aa17.16■□□□□ 0.34
RPAIN-202ENST00000381208 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
RPAIN-202ENST00000381208 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
RPAIN-202ENST00000381208 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
RPAIN-202ENST00000381208 AFDNP55196 1824 aaKnown RBP17.16■□□□□ 0.34
RPAIN-202ENST00000381208 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
RPAIN-202ENST00000381208 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
RPAIN-202ENST00000381208 LMNB1P20700 586 aa17.15■□□□□ 0.34
RPAIN-202ENST00000381208 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
RPAIN-202ENST00000381208 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPAIN-202ENST00000381208 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
RPAIN-202ENST00000381208 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPAIN-202ENST00000381208 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
RPAIN-202ENST00000381208 SOGA3Q5TF21 947 aa17.12■□□□□ 0.33
RPAIN-202ENST00000381208 STYK1Q6J9G0 422 aa17.12■□□□□ 0.33
RPAIN-202ENST00000381208 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-202ENST00000381208 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
RPAIN-202ENST00000381208 TPTE2Q6XPS3 522 aa17.11■□□□□ 0.33
RPAIN-202ENST00000381208 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
RPAIN-202ENST00000381208 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
RPAIN-202ENST00000381208 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
RPAIN-202ENST00000381208 DLEC1Q9Y238 1755 aa17.1■□□□□ 0.33
RPAIN-202ENST00000381208 NBPF26B4DH59 902 aa17.1■□□□□ 0.33
RPAIN-202ENST00000381208 NBPF10Q6P3W6 841 aaKnown RBP17.1■□□□□ 0.33
RPAIN-202ENST00000381208 NBPF15Q8N660 670 aa17.1■□□□□ 0.33
RPAIN-202ENST00000381208 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
RPAIN-202ENST00000381208 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
RPAIN-202ENST00000381208 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-202ENST00000381208 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
RPAIN-202ENST00000381208 SRGNP10124 158 aa17.09■□□□□ 0.33
RPAIN-202ENST00000381208 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-202ENST00000381208 APLP1P51693 650 aa17.09■□□□□ 0.33
RPAIN-202ENST00000381208 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
RPAIN-202ENST00000381208 RASSF7Q02833 373 aa17.09■□□□□ 0.33
RPAIN-202ENST00000381208 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPAIN-202ENST00000381208 ERBB4Q15303 1308 aa17.09■□□□□ 0.33
RPAIN-202ENST00000381208 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
RPAIN-202ENST00000381208 FSTL1Q12841 308 aa17.08■□□□□ 0.32
RPAIN-202ENST00000381208 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.32
RPAIN-202ENST00000381208 BCORQ6W2J9 1755 aa17.08■□□□□ 0.32
RPAIN-202ENST00000381208 NFKBIEO00221 500 aa17.07■□□□□ 0.32
RPAIN-202ENST00000381208 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
RPAIN-202ENST00000381208 NYXQ9GZU5 481 aa17.07■□□□□ 0.32
RPAIN-202ENST00000381208 CEP350Q5VT06 3117 aa17.07■□□□□ 0.32
RPAIN-202ENST00000381208 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-202ENST00000381208 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 C21orf2O43822 256 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 NPR1P16066 1061 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 RIPK4P57078 832 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 DPY19L2Q6NUT2 758 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 KIF6Q6ZMV9 814 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 CCDC24Q8N4L8 307 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 SBF1O95248 1867 aa17.06■□□□□ 0.32
RPAIN-202ENST00000381208 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-202ENST00000381208 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
RPAIN-202ENST00000381208 TAOK3Q9H2K8 898 aa17.05■□□□□ 0.32
RPAIN-202ENST00000381208 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
RPAIN-202ENST00000381208 ANKRD31Q8N7Z5 1873 aa17.05■□□□□ 0.32
RPAIN-202ENST00000381208 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
RPAIN-202ENST00000381208 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
RPAIN-202ENST00000381208 THUMPD2Q9BTF0 503 aaKnown RBP17.04■□□□□ 0.32
RPAIN-202ENST00000381208 MAP3K15Q6ZN16 1313 aa17.04■□□□□ 0.32
RPAIN-202ENST00000381208 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
RPAIN-202ENST00000381208 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
RPAIN-202ENST00000381208 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
RPAIN-202ENST00000381208 VEGFAP15692 232 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-202ENST00000381208 ALDH1B1P30837 517 aa17.03■□□□□ 0.32
RPAIN-202ENST00000381208 RRP7AQ9Y3A4 280 aaKnown RBP17.03■□□□□ 0.32
RPAIN-202ENST00000381208 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.32
RPAIN-202ENST00000381208 HLFQ16534 295 aa17.02■□□□□ 0.32
RPAIN-202ENST00000381208 ERFEQ4G0M1 354 aa17.02■□□□□ 0.32
RPAIN-202ENST00000381208 CCDC93Q567U6 631 aa17.02■□□□□ 0.32
RPAIN-202ENST00000381208 SMC1BQ8NDV3 1235 aa17.02■□□□□ 0.32
RPAIN-202ENST00000381208 TNRC6CQ9HCJ0 1690 aaKnown RBP17.02■□□□□ 0.31
RPAIN-202ENST00000381208 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
RPAIN-202ENST00000381208 PRELPP51888 382 aa17.02■□□□□ 0.31
RPAIN-202ENST00000381208 NGEFQ8N5V2 710 aa17.02■□□□□ 0.31
RPAIN-202ENST00000381208 MYL6BP14649 208 aa17.01■□□□□ 0.31
RPAIN-202ENST00000381208 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
RPAIN-202ENST00000381208 COL11A2P13942 1736 aaPredicted RBP17■□□□□ 0.31
RPAIN-202ENST00000381208 EVX2Q03828 476 aa17■□□□□ 0.31
RPAIN-202ENST00000381208 PARP10Q53GL7 1025 aa17■□□□□ 0.31
RPAIN-202ENST00000381208 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
RPAIN-202ENST00000381208 C7orf43Q8WVR3 580 aa17■□□□□ 0.31
RPAIN-202ENST00000381208 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
RPAIN-202ENST00000381208 CC2D2BQ6DHV5 1058 aa16.99■□□□□ 0.31
RPAIN-202ENST00000381208 GIGYF2Q6Y7W6 1299 aaKnown RBP16.99■□□□□ 0.31
RPAIN-202ENST00000381208 TTLL7Q6ZT98 887 aa16.99■□□□□ 0.31
RPAIN-202ENST00000381208 FER1L6Q2WGJ9 1857 aa16.98■□□□□ 0.31
RPAIN-202ENST00000381208 CRY2Q49AN0 593 aa16.98■□□□□ 0.31
RPAIN-202ENST00000381208 GRIPAP1Q4V328 841 aa16.98■□□□□ 0.31
RPAIN-202ENST00000381208 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
RPAIN-202ENST00000381208 RIC1Q4ADV7 1423 aa16.97■□□□□ 0.31
RPAIN-202ENST00000381208 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms