RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
NPC1L1-202ENST00000381160 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
NPC1L1-202ENST00000381160 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 RAPGEF3O95398 923 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 PDCP20941 246 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 A0A087WWV3 80 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 IFIT2P09913 472 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 ME3Q16798 604 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 NOL10Q9BSC4 688 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 SH2B1Q9NRF2 756 aaPredicted RBP13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 REREQ9P2R6 1566 aa13.18□□□□□ -0.3
NPC1L1-202ENST00000381160 TERF2Q15554 542 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 USP27XA6NNY8 438 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 NRDCO43847 1150 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 DDX19AQ9NUU7 478 aaKnown RBP13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 ZBTB9Q96C00 473 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 PPP6R1Q9UPN7 881 aa13.17□□□□□ -0.3
NPC1L1-202ENST00000381160 NR1I2O75469 434 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 PTH1RQ03431 593 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 CLASRPQ8N2M8 674 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 CALCOCO1Q9P1Z2 691 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 GLI2P10070 1586 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 MROH2AA6NES4 1674 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 EFCAB6Q5THR3 1501 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 SMC2O95347 1197 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 SETBP1Q9Y6X0 1596 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 SLFN14P0C7P3 912 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
NPC1L1-202ENST00000381160 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 LSG1Q9H089 658 aaKnown RBP13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 AMPHP49418 695 aa13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 LARP1Q6PKG0 1096 aaKnown RBP13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 ASXL2Q76L83 1435 aa13.15□□□□□ -0.3
NPC1L1-202ENST00000381160 SLU7O95391 586 aaKnown RBP13.15□□□□□ -0.31
NPC1L1-202ENST00000381160 TTC14Q96N46 770 aa13.15□□□□□ -0.31
NPC1L1-202ENST00000381160 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.31
NPC1L1-202ENST00000381160 CCDC171Q6TFL3 1326 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 MNS1Q8NEH6 495 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 ZFP91Q96JP5 570 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 ADGRB3O60242 1522 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 TCHHQ07283 1943 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 MLECQ14165 292 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 ERCC6LQ2NKX8 1250 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 TEX35Q5T0J7 233 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 SLC52A1Q9NWF4 448 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-202ENST00000381160 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 PSMA5P28066 241 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 LRRC8AQ8IWT6 810 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 IRX3P78415 501 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 SYT10Q6XYQ8 523 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 CLSTN2Q9H4D0 955 aa13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 MORC2Q9Y6X9 1032 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-202ENST00000381160 RNF20Q5VTR2 975 aa13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 ERO1AQ96HE7 468 aa13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 USP32Q8NFA0 1604 aa13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 ANXA1P04083 346 aa13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 BMS1Q14692 1282 aaKnown RBP13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 AACSQ86V21 672 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms