RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 RGPD2P0DJD1 1756 aa19.64■□□□□ 0.74
VPS16-203ENST00000380469 RUFY3Q7L099 469 aa19.64■□□□□ 0.73
VPS16-203ENST00000380469 GDPD2Q9HCC8 539 aa19.64■□□□□ 0.73
VPS16-203ENST00000380469 HYPKQ9NX55 129 aa19.64■□□□□ 0.73
VPS16-203ENST00000380469 SMC3Q9UQE7 1217 aa19.64■□□□□ 0.73
VPS16-203ENST00000380469 RPAP1Q9BWH6 1393 aaPredicted RBP19.63■□□□□ 0.73
VPS16-203ENST00000380469 GADD45BO75293 160 aaPredicted RBP19.63■□□□□ 0.73
VPS16-203ENST00000380469 GCP02774 474 aa19.63■□□□□ 0.73
VPS16-203ENST00000380469 ZSCAN22P10073 491 aaPredicted RBP19.63■□□□□ 0.73
VPS16-203ENST00000380469 CASTP20810 708 aaKnown RBP19.63■□□□□ 0.73
VPS16-203ENST00000380469 OVOS2A0A0G2JMS6 1433 aa19.63■□□□□ 0.73
VPS16-203ENST00000380469 PHRF1Q9P1Y6 1649 aaKnown RBP19.63■□□□□ 0.73
VPS16-203ENST00000380469 OFD1O75665 1012 aa19.63■□□□□ 0.73
VPS16-203ENST00000380469 TPM2P07951 284 aa19.63■□□□□ 0.73
VPS16-203ENST00000380469 RNF214Q8ND24 703 aa19.63■□□□□ 0.73
VPS16-203ENST00000380469 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
VPS16-203ENST00000380469 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.62■□□□□ 0.73
VPS16-203ENST00000380469 ARHGEF25Q86VW2 580 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 TMEM87AQ8NBN3 555 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 EVI5LQ96CN4 794 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 ATP6V1DQ9Y5K8 247 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 CRYBG1Q9Y4K1 1723 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 STX6O43752 255 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 DDX58O95786 925 aaKnown RBP19.62■□□□□ 0.73
VPS16-203ENST00000380469 PROSER3Q2NL68 480 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 ANKRD24Q8TF21 1146 aa19.62■□□□□ 0.73
VPS16-203ENST00000380469 CWF19L2Q2TBE0 894 aaKnown RBP19.61■□□□□ 0.73
VPS16-203ENST00000380469 AACSQ86V21 672 aa19.61■□□□□ 0.73
VPS16-203ENST00000380469 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
VPS16-203ENST00000380469 SYT1P21579 422 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 MCM5P33992 734 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 VPS53Q5VIR6 699 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 LINS1Q8NG48 757 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 LARP6Q9BRS8 491 aaKnown RBP19.6■□□□□ 0.73
VPS16-203ENST00000380469 PDRG1Q9NUG6 133 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 ZNF500O60304 480 aaPredicted RBP19.6■□□□□ 0.73
VPS16-203ENST00000380469 PTH1RQ03431 593 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 G3BP1Q13283 466 aaKnown RBP eCLIP19.6■□□□□ 0.73
VPS16-203ENST00000380469 ZSCAN31Q96LW9 406 aaPredicted RBP19.6■□□□□ 0.73
VPS16-203ENST00000380469 JAKMIP1Q96N16 626 aaKnown RBP19.6■□□□□ 0.73
VPS16-203ENST00000380469 TM6SF1Q9BZW5 370 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 HEG1Q9ULI3 1381 aa19.6■□□□□ 0.73
VPS16-203ENST00000380469 GRM8O00222 908 aa19.59■□□□□ 0.73
VPS16-203ENST00000380469 HIP1O00291 1037 aa19.59■□□□□ 0.73
VPS16-203ENST00000380469 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
VPS16-203ENST00000380469 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
VPS16-203ENST00000380469 LETM1O95202 739 aaPredicted RBP19.59■□□□□ 0.73
VPS16-203ENST00000380469 CNPY2Q9Y2B0 182 aa19.59■□□□□ 0.73
VPS16-203ENST00000380469 PXDNQ92626 1479 aa19.59■□□□□ 0.73
VPS16-203ENST00000380469 ZKSCAN1P17029 563 aaPredicted RBP19.58■□□□□ 0.73
VPS16-203ENST00000380469 ZSWIM6Q9HCJ5 1215 aa19.58■□□□□ 0.73
VPS16-203ENST00000380469 SH2B1Q9NRF2 756 aaPredicted RBP19.58■□□□□ 0.73
VPS16-203ENST00000380469 ZKSCAN5Q9Y2L8 839 aa19.58■□□□□ 0.73
VPS16-203ENST00000380469 F13A1P00488 732 aa19.58■□□□□ 0.72
VPS16-203ENST00000380469 CPA1P15085 419 aa19.58■□□□□ 0.72
VPS16-203ENST00000380469 CCDC183Q5T5S1 534 aa19.58■□□□□ 0.72
VPS16-203ENST00000380469 KCNB2Q92953 911 aa19.58■□□□□ 0.72
VPS16-203ENST00000380469 PRAMEF22A3QJZ6 481 aa19.57■□□□□ 0.72
VPS16-203ENST00000380469 UBE2HP62256 183 aa19.57■□□□□ 0.72
VPS16-203ENST00000380469 CSPP1Q1MSJ5 1256 aa19.57■□□□□ 0.72
VPS16-203ENST00000380469 FAM184AQ8NB25 1140 aa19.57■□□□□ 0.72
VPS16-203ENST00000380469 DDX21Q9NR30 783 aaKnown RBP eCLIP19.57■□□□□ 0.72
VPS16-203ENST00000380469 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.57■□□□□ 0.72
VPS16-203ENST00000380469 UTYO14607 1347 aa19.57■□□□□ 0.72
VPS16-203ENST00000380469 KCNJ4P48050 445 aa19.57■□□□□ 0.72
VPS16-203ENST00000380469 XPCQ01831 940 aaPredicted RBP19.57■□□□□ 0.72
VPS16-203ENST00000380469 SUCLG2Q96I99 432 aa19.57■□□□□ 0.72
VPS16-203ENST00000380469 CCDC171Q6TFL3 1326 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 AIMP1Q12904 312 aaKnown RBP19.56■□□□□ 0.72
VPS16-203ENST00000380469 CCDC83Q8IWF9 413 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 BICC1Q9H694 974 aaKnown RBP19.56■□□□□ 0.72
VPS16-203ENST00000380469 TCHHQ07283 1943 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 GJB2P29033 226 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 NECTIN1Q15223 517 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 UVSSAQ2YD98 709 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 ADCK5Q3MIX3 580 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 ORAI2Q96SN7 254 aa19.56■□□□□ 0.72
VPS16-203ENST00000380469 RRP9O43818 475 aaKnown RBP19.55■□□□□ 0.72
VPS16-203ENST00000380469 PTMAP06454 111 aaKnown RBP19.55■□□□□ 0.72
VPS16-203ENST00000380469 HSP90AA2PQ14568 343 aaPredicted RBP19.55■□□□□ 0.72
VPS16-203ENST00000380469 SLIT3O75094 1523 aa19.55■□□□□ 0.72
VPS16-203ENST00000380469 SASH1O94885 1247 aa19.54■□□□□ 0.72
VPS16-203ENST00000380469 LARGE1O95461 756 aa19.54■□□□□ 0.72
VPS16-203ENST00000380469 RIC3Q7Z5B4 369 aa19.54■□□□□ 0.72
VPS16-203ENST00000380469 TERF1P54274 439 aa19.54■□□□□ 0.72
VPS16-203ENST00000380469 LARP1Q6PKG0 1096 aaKnown RBP19.54■□□□□ 0.72
VPS16-203ENST00000380469 RBM8AQ9Y5S9 174 aaKnown RBP19.54■□□□□ 0.72
VPS16-203ENST00000380469 PSMA5P28066 241 aa19.53■□□□□ 0.72
VPS16-203ENST00000380469 NEXNQ0ZGT2 675 aa19.53■□□□□ 0.72
VPS16-203ENST00000380469 CREB3L3Q68CJ9 461 aa19.53■□□□□ 0.72
VPS16-203ENST00000380469 EAF2Q96CJ1 260 aaPredicted RBP19.53■□□□□ 0.72
VPS16-203ENST00000380469 CCDC8Q9H0W5 538 aaPredicted RBP19.53■□□□□ 0.72
VPS16-203ENST00000380469 NMIQ13287 307 aaPredicted RBP19.53■□□□□ 0.72
VPS16-203ENST00000380469 MAP4K1Q92918 833 aa19.53■□□□□ 0.72
VPS16-203ENST00000380469 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
VPS16-203ENST00000380469 FIBPO43427 364 aa19.52■□□□□ 0.72
VPS16-203ENST00000380469 AXIN2Q9Y2T1 843 aa19.52■□□□□ 0.72
VPS16-203ENST00000380469 TPRNQ4KMQ1 711 aa19.52■□□□□ 0.71
VPS16-203ENST00000380469 FAM227BQ96M60 508 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms