RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PRAMEF22A3QJZ6 481 aa30.83■■■□□ 2.53
U2AF1-202ENST00000380276 ERFEQ4G0M1 354 aa30.83■■■□□ 2.53
U2AF1-202ENST00000380276 PPP2R1AP30153 589 aa30.82■■■□□ 2.52
U2AF1-202ENST00000380276 CNKSR1Q969H4 720 aa30.81■■■□□ 2.52
U2AF1-202ENST00000380276 SNRPA1P09661 255 aaKnown RBP30.8■■■□□ 2.52
U2AF1-202ENST00000380276 DCTN1Q14203 1278 aa30.8■■■□□ 2.52
U2AF1-202ENST00000380276 NBPF5PQ86XG9 351 aaPredicted RBP30.79■■■□□ 2.52
U2AF1-202ENST00000380276 TAOK3Q9H2K8 898 aa30.79■■■□□ 2.52
U2AF1-202ENST00000380276 ZNF652Q9Y2D9 606 aa30.79■■■□□ 2.52
U2AF1-202ENST00000380276 STYK1Q6J9G0 422 aa30.78■■■□□ 2.52
U2AF1-202ENST00000380276 PRPF40BQ6NWY9 871 aaKnown RBP30.78■■■□□ 2.52
U2AF1-202ENST00000380276 FER1L6Q2WGJ9 1857 aa30.77■■■□□ 2.52
U2AF1-202ENST00000380276 MASTLQ96GX5 879 aa30.77■■■□□ 2.52
U2AF1-202ENST00000380276 SRGNP10124 158 aa30.76■■■□□ 2.51
U2AF1-202ENST00000380276 FAM177BA6PVY3 158 aa30.75■■■□□ 2.51
U2AF1-202ENST00000380276 JMYQ8N9B5 988 aa30.75■■■□□ 2.51
U2AF1-202ENST00000380276 SLX4Q8IY92 1834 aa30.75■■■□□ 2.51
U2AF1-202ENST00000380276 SOGA3Q5TF21 947 aa30.74■■■□□ 2.51
U2AF1-202ENST00000380276 DICER1Q9UPY3 1922 aaKnown RBP30.74■■■□□ 2.51
U2AF1-202ENST00000380276 NEFMP07197 916 aa30.73■■■□□ 2.51
U2AF1-202ENST00000380276 CLEC4GQ6UXB4 293 aa30.73■■■□□ 2.51
U2AF1-202ENST00000380276 NIP7Q9Y221 180 aaKnown RBP eCLIP30.72■■■□□ 2.51
U2AF1-202ENST00000380276 LTBP3Q9NS15 1303 aa30.72■■■□□ 2.51
U2AF1-202ENST00000380276 POTECB2RU33 542 aa30.71■■■□□ 2.51
U2AF1-202ENST00000380276 ARFGEF2Q9Y6D5 1785 aa30.71■■■□□ 2.51
U2AF1-202ENST00000380276 HTATSF1O43719 755 aaKnown RBP30.7■■■□□ 2.51
U2AF1-202ENST00000380276 MIS18AQ9NYP9 233 aa30.7■■■□□ 2.51
U2AF1-202ENST00000380276 NBPF26B4DH59 902 aa30.69■■■□□ 2.5
U2AF1-202ENST00000380276 DDNO94850 711 aaPredicted RBP30.69■■■□□ 2.5
U2AF1-202ENST00000380276 TAF7Q15545 349 aaPredicted RBP30.69■■■□□ 2.5
U2AF1-202ENST00000380276 NBPF10Q6P3W6 841 aaKnown RBP30.69■■■□□ 2.5
U2AF1-202ENST00000380276 NBPF15Q8N660 670 aa30.69■■■□□ 2.5
U2AF1-202ENST00000380276 CCDC93Q567U6 631 aa30.68■■■□□ 2.5
U2AF1-202ENST00000380276 TPTE2Q6XPS3 522 aa30.68■■■□□ 2.5
U2AF1-202ENST00000380276 NPR1P16066 1061 aa30.67■■■□□ 2.5
U2AF1-202ENST00000380276 GTF2E1P29083 439 aaPredicted RBP30.67■■■□□ 2.5
U2AF1-202ENST00000380276 NGEFQ8N5V2 710 aa30.67■■■□□ 2.5
U2AF1-202ENST00000380276 COL13A1Q5TAT6 717 aaPredicted RBP30.64■■■□□ 2.5
U2AF1-202ENST00000380276 LAMB4A4D0S4 1761 aa30.64■■■□□ 2.49
U2AF1-202ENST00000380276 HLFQ16534 295 aa30.63■■■□□ 2.49
U2AF1-202ENST00000380276 CHADLQ6NUI6 762 aa30.63■■■□□ 2.49
U2AF1-202ENST00000380276 PNISRQ8TF01 805 aaKnown RBP30.61■■■□□ 2.49
U2AF1-202ENST00000380276 ZNF277Q9NRM2 450 aaPredicted RBP30.61■■■□□ 2.49
U2AF1-202ENST00000380276 POTEIP0CG38 1075 aa30.6■■■□□ 2.49
U2AF1-202ENST00000380276 POTEJP0CG39 1038 aa30.6■■■□□ 2.49
U2AF1-202ENST00000380276 FKBP4Q02790 459 aaKnown RBP eCLIP30.6■■■□□ 2.49
U2AF1-202ENST00000380276 DLG5Q8TDM6 1919 aa30.59■■■□□ 2.49
U2AF1-202ENST00000380276 HSPA1AP0DMV8 641 aaKnown RBP30.59■■■□□ 2.49
U2AF1-202ENST00000380276 HSPA1BP0DMV9 641 aaKnown RBP30.59■■■□□ 2.49
U2AF1-202ENST00000380276 OLFM4Q6UX06 510 aa30.59■■■□□ 2.49
U2AF1-202ENST00000380276 C7orf43Q8WVR3 580 aa30.59■■■□□ 2.49
U2AF1-202ENST00000380276 RRP7AQ9Y3A4 280 aaKnown RBP30.59■■■□□ 2.49
U2AF1-202ENST00000380276 IQCA1LA6NCM1 817 aa30.58■■■□□ 2.49
U2AF1-202ENST00000380276 RGL2O15211 777 aa30.58■■■□□ 2.49
U2AF1-202ENST00000380276 KIF6Q6ZMV9 814 aa30.57■■■□□ 2.48
U2AF1-202ENST00000380276 KDM3BQ7LBC6 1761 aa30.56■■■□□ 2.48
U2AF1-202ENST00000380276 CAPN15O75808 1086 aa30.56■■■□□ 2.48
U2AF1-202ENST00000380276 MYL6BP14649 208 aa30.56■■■□□ 2.48
U2AF1-202ENST00000380276 ALDH1B1P30837 517 aa30.56■■■□□ 2.48
U2AF1-202ENST00000380276 RTKN2Q8IZC4 609 aa30.56■■■□□ 2.48
U2AF1-202ENST00000380276 TNS4Q8IZW8 715 aa30.56■■■□□ 2.48
U2AF1-202ENST00000380276 THUMPD2Q9BTF0 503 aaKnown RBP30.56■■■□□ 2.48
U2AF1-202ENST00000380276 MAPK8IP3Q9UPT6 1336 aa30.55■■■□□ 2.48
U2AF1-202ENST00000380276 KLRG2A4D1S0 409 aaPredicted RBP30.55■■■□□ 2.48
U2AF1-202ENST00000380276 EAPPQ56P03 285 aaPredicted RBP30.55■■■□□ 2.48
U2AF1-202ENST00000380276 NUTM1Q86Y26 1132 aa30.55■■■□□ 2.48
U2AF1-202ENST00000380276 NYXQ9GZU5 481 aa30.55■■■□□ 2.48
U2AF1-202ENST00000380276 MKRN1Q9UHC7 482 aaKnown RBP30.55■■■□□ 2.48
U2AF1-202ENST00000380276 ZNF541Q9H0D2 1346 aa30.54■■■□□ 2.48
U2AF1-202ENST00000380276 NFE2L2Q16236 605 aa30.53■■■□□ 2.48
U2AF1-202ENST00000380276 TAF1DQ9H5J8 278 aaPredicted RBP30.53■■■□□ 2.48
U2AF1-202ENST00000380276 CREBZFQ9NS37 354 aa30.53■■■□□ 2.48
U2AF1-202ENST00000380276 ABCC12Q96J65 1359 aa30.53■■■□□ 2.48
U2AF1-202ENST00000380276 MAP3K15Q6ZN16 1313 aa30.52■■■□□ 2.48
U2AF1-202ENST00000380276 GPTP24298 496 aa30.52■■■□□ 2.48
U2AF1-202ENST00000380276 EIF4A1P60842 406 aaKnown RBP30.52■■■□□ 2.48
U2AF1-202ENST00000380276 TTLL7Q6ZT98 887 aa30.52■■■□□ 2.48
U2AF1-202ENST00000380276 LDHDQ86WU2 507 aa30.52■■■□□ 2.48
U2AF1-202ENST00000380276 ZBTB3Q9H5J0 574 aa30.52■■■□□ 2.48
U2AF1-202ENST00000380276 IARSP41252 1262 aaKnown RBP30.51■■■□□ 2.47
U2AF1-202ENST00000380276 SYNE4Q8N205 404 aa30.51■■■□□ 2.47
U2AF1-202ENST00000380276 L3MBTL3Q96JM7 780 aaPredicted RBP30.51■■■□□ 2.47
U2AF1-202ENST00000380276 CLEC11AQ9Y240 323 aa30.51■■■□□ 2.47
U2AF1-202ENST00000380276 SCN4AP35499 1836 aa30.5■■■□□ 2.47
U2AF1-202ENST00000380276 ERVV-1B6SEH8 477 aa30.5■■■□□ 2.47
U2AF1-202ENST00000380276 RPGRQ92834 1020 aaKnown RBP30.5■■■□□ 2.47
U2AF1-202ENST00000380276 PLEKHF1Q96S99 279 aa30.5■■■□□ 2.47
U2AF1-202ENST00000380276 NUP98P52948 1817 aa30.5■■■□□ 2.47
U2AF1-202ENST00000380276 PNNQ9H307 717 aaKnown RBP30.49■■■□□ 2.47
U2AF1-202ENST00000380276 HACL1Q9UJ83 578 aa30.49■■■□□ 2.47
U2AF1-202ENST00000380276 JDP2Q8WYK2 163 aa30.46■■■□□ 2.47
U2AF1-202ENST00000380276 RNF123Q5XPI4 1314 aa30.46■■■□□ 2.47
U2AF1-202ENST00000380276 EPHX2P34913 555 aa30.45■■■□□ 2.47
U2AF1-202ENST00000380276 TSPYL4Q9UJ04 414 aa30.45■■■□□ 2.47
U2AF1-202ENST00000380276 TCERG1O14776 1098 aaKnown RBP30.44■■■□□ 2.46
U2AF1-202ENST00000380276 CRY2Q49AN0 593 aa30.44■■■□□ 2.46
U2AF1-202ENST00000380276 SUSD4Q5VX71 490 aa30.44■■■□□ 2.46
U2AF1-202ENST00000380276 UBN2Q6ZU65 1347 aa30.44■■■□□ 2.46
U2AF1-202ENST00000380276 GJA3Q9Y6H8 435 aa30.43■■■□□ 2.46
U2AF1-202ENST00000380276 EIF2S2P20042 333 aaKnown RBP30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms