RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 MYOM1P52179 1685 aa13.45□□□□□ -0.26
SMAD9-202ENST00000379826 SH2B1Q9NRF2 756 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-202ENST00000379826 SYT1P21579 422 aa13.44□□□□□ -0.26
SMAD9-202ENST00000379826 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
SMAD9-202ENST00000379826 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
SMAD9-202ENST00000379826 PIK3R4Q99570 1358 aa13.44□□□□□ -0.26
SMAD9-202ENST00000379826 ANO6Q4KMQ2 910 aa13.44□□□□□ -0.26
SMAD9-202ENST00000379826 SNX14Q9Y5W7 946 aa13.44□□□□□ -0.26
SMAD9-202ENST00000379826 TULP4Q9NRJ4 1543 aa13.44□□□□□ -0.26
SMAD9-202ENST00000379826 BRD1O95696 1058 aa13.44□□□□□ -0.26
SMAD9-202ENST00000379826 INTS4Q96HW7 963 aaKnown RBP13.44□□□□□ -0.26
SMAD9-202ENST00000379826 TRMT1Q9NXH9 659 aaKnown RBP13.44□□□□□ -0.26
SMAD9-202ENST00000379826 APPP05067 770 aa13.43□□□□□ -0.26
SMAD9-202ENST00000379826 NAT10Q9H0A0 1025 aaKnown RBP13.43□□□□□ -0.26
SMAD9-202ENST00000379826 TNNT1P13805 278 aa13.43□□□□□ -0.26
SMAD9-202ENST00000379826 PTGS1P23219 599 aa13.43□□□□□ -0.26
SMAD9-202ENST00000379826 PRIMPOLQ96LW4 560 aa13.43□□□□□ -0.26
SMAD9-202ENST00000379826 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 EYA1Q99502 592 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
SMAD9-202ENST00000379826 LUZP1Q86V48 1076 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 PDILTQ8N807 584 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 STK11IPQ8N1F8 1099 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 EVI5LQ96CN4 794 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 RBM8AQ9Y5S9 174 aaKnown RBP13.42□□□□□ -0.26
SMAD9-202ENST00000379826 LRRC7Q96NW7 1537 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 CFAP74Q9C0B2 1584 aa13.42□□□□□ -0.26
SMAD9-202ENST00000379826 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
SMAD9-202ENST00000379826 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
SMAD9-202ENST00000379826 FAM173BQ6P4H8 233 aa13.41□□□□□ -0.26
SMAD9-202ENST00000379826 CCDC186Q7Z3E2 898 aa13.41□□□□□ -0.26
SMAD9-202ENST00000379826 ZNF500O60304 480 aaPredicted RBP13.41□□□□□ -0.26
SMAD9-202ENST00000379826 IGSF3O75054 1194 aa13.41□□□□□ -0.26
SMAD9-202ENST00000379826 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
SMAD9-202ENST00000379826 CCDC94Q9BW85 323 aaPredicted RBP13.41□□□□□ -0.26
SMAD9-202ENST00000379826 CCT2P78371 535 aaKnown RBP13.41□□□□□ -0.26
SMAD9-202ENST00000379826 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
SMAD9-202ENST00000379826 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
SMAD9-202ENST00000379826 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
SMAD9-202ENST00000379826 STK38Q15208 465 aa13.41□□□□□ -0.26
SMAD9-202ENST00000379826 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 FAM177A1Q8N128 213 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-202ENST00000379826 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 ADGRB3O60242 1522 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 KIF24Q5T7B8 1368 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-202ENST00000379826 ERICH4A6NGS2 130 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 DNAJC25Q9H1X3 360 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 MYD88Q99836 296 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 MROH2AA6NES4 1674 aa13.4□□□□□ -0.26
SMAD9-202ENST00000379826 SCAND2PQ9GZW5 306 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-202ENST00000379826 BAG6P46379 1132 aa13.39□□□□□ -0.27
SMAD9-202ENST00000379826 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
SMAD9-202ENST00000379826 DDIT3P35638 169 aa13.39□□□□□ -0.27
SMAD9-202ENST00000379826 TYRO3Q06418 890 aa13.39□□□□□ -0.27
SMAD9-202ENST00000379826 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
SMAD9-202ENST00000379826 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
SMAD9-202ENST00000379826 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
SMAD9-202ENST00000379826 ZNF165P49910 485 aa13.38□□□□□ -0.27
SMAD9-202ENST00000379826 RUFY3Q7L099 469 aa13.38□□□□□ -0.27
SMAD9-202ENST00000379826 SETBP1Q9Y6X0 1596 aa13.38□□□□□ -0.27
SMAD9-202ENST00000379826 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
SMAD9-202ENST00000379826 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMAD9-202ENST00000379826 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-202ENST00000379826 TRIM29Q14134 588 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 HSPA4P34932 840 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 CREB3L3Q68CJ9 461 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 RAB11FIP4Q86YS3 637 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 FAM200AQ8TCP9 573 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 PIBF1Q8WXW3 757 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 NBPF7P0C2Y1 421 aaPredicted RBP13.37□□□□□ -0.27
SMAD9-202ENST00000379826 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
SMAD9-202ENST00000379826 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMAD9-202ENST00000379826 TMX1Q9H3N1 280 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 MYRIPQ8NFW9 859 aa13.37□□□□□ -0.27
SMAD9-202ENST00000379826 ABCC3O15438 1527 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 TNNT3P45378 269 aaPredicted RBP13.36□□□□□ -0.27
SMAD9-202ENST00000379826 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 ISM2Q6H9L7 571 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 CEP57L1Q8IYX8 460 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 DDX19AQ9NUU7 478 aaKnown RBP13.36□□□□□ -0.27
SMAD9-202ENST00000379826 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
SMAD9-202ENST00000379826 SGSM2O43147 1006 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 SERPINC1P01008 464 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 PIP4K2AP48426 406 aaPredicted RBP13.36□□□□□ -0.27
SMAD9-202ENST00000379826 GRM1Q13255 1194 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 CEP135Q66GS9 1140 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
SMAD9-202ENST00000379826 YEATS2Q9ULM3 1422 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 BIN1O00499 593 aa13.36□□□□□ -0.27
SMAD9-202ENST00000379826 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
SMAD9-202ENST00000379826 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
SMAD9-202ENST00000379826 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms