RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 SIK1P57059 783 aa15.16■□□□□ 0.02
EXOSC9-202ENST00000379663 PTF1AQ7RTS3 328 aa15.16■□□□□ 0.02
EXOSC9-202ENST00000379663 SCN7AQ01118 1682 aa15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 C4AP0C0L4 1744 aa15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 C4BP0C0L5 1744 aa15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 UBR3Q6ZT12 1888 aa15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 STARD3NLO95772 234 aa15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 PIP4K2AP48426 406 aaPredicted RBP15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 XAGE3Q8WTP9 111 aa15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 PCDHB15Q9Y5E8 787 aa15.15■□□□□ 0.02
EXOSC9-202ENST00000379663 DDX58O95786 925 aaKnown RBP15.14■□□□□ 0.01
EXOSC9-202ENST00000379663 RXRBP28702 533 aa15.14■□□□□ 0.01
EXOSC9-202ENST00000379663 BEND3Q5T5X7 828 aa15.14■□□□□ 0.01
EXOSC9-202ENST00000379663 SLC4A10Q6U841 1118 aa15.14■□□□□ 0.01
EXOSC9-202ENST00000379663 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
EXOSC9-202ENST00000379663 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
EXOSC9-202ENST00000379663 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
EXOSC9-202ENST00000379663 MAP3K2Q9Y2U5 619 aa15.13■□□□□ 0.01
EXOSC9-202ENST00000379663 ATP6V1AP38606 617 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 ITPK1Q13572 414 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 POTEAQ6S8J7 498 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 MEIS3Q99687 375 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 MYH3P11055 1940 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 AIMP1Q12904 312 aaKnown RBP15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 SRCIN1Q9C0H9 1055 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 ZBTB1Q9Y2K1 713 aa15.12■□□□□ 0.01
EXOSC9-202ENST00000379663 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
EXOSC9-202ENST00000379663 ANKRD13DQ6ZTN6 518 aa15.11■□□□□ 0.01
EXOSC9-202ENST00000379663 CENPQQ7L2Z9 268 aaPredicted RBP15.11■□□□□ 0.01
EXOSC9-202ENST00000379663 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 ALDH1L1O75891 902 aa15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 IL6STP40189 918 aaPredicted RBP15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 HDAC1Q13547 482 aaPredicted RBP15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 LINS1Q8NG48 757 aa15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 METTL22Q9BUU2 404 aaPredicted RBP15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 LAMB2P55268 1798 aa15.1■□□□□ 0.01
EXOSC9-202ENST00000379663 CNTNAP4Q9C0A0 1308 aa15.09■□□□□ 0.01
EXOSC9-202ENST00000379663 IGHDP01880 384 aa15.09■□□□□ 0.01
EXOSC9-202ENST00000379663 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
EXOSC9-202ENST00000379663 RIC3Q7Z5B4 369 aa15.09■□□□□ 0.01
EXOSC9-202ENST00000379663 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
EXOSC9-202ENST00000379663 CCDC87Q9NVE4 849 aa15.09■□□□□ 0.01
EXOSC9-202ENST00000379663 UTYO14607 1347 aa15.08■□□□□ 0.01
EXOSC9-202ENST00000379663 IGKV5-2P06315 115 aa15.08■□□□□ 0.01
EXOSC9-202ENST00000379663 C1orf115Q9H7X2 142 aa15.08■□□□□ 0.01
EXOSC9-202ENST00000379663 GNAI3P08754 354 aa15.07■□□□□ 0
EXOSC9-202ENST00000379663 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
EXOSC9-202ENST00000379663 LINC00116Q8NCU8 138 aa15.07■□□□□ 0
EXOSC9-202ENST00000379663 COL24A1Q17RW2 1714 aa15.07■□□□□ 0
EXOSC9-202ENST00000379663 NEURL1BA8MQ27 555 aa15.07■□□□□ 0
EXOSC9-202ENST00000379663 NEXNQ0ZGT2 675 aa15.07■□□□□ 0
EXOSC9-202ENST00000379663 CWF19L2Q2TBE0 894 aaKnown RBP15.07■□□□□ 0
EXOSC9-202ENST00000379663 SIRT2Q8IXJ6 389 aa15.07■□□□□ 0
EXOSC9-202ENST00000379663 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
EXOSC9-202ENST00000379663 CEP85Q6P2H3 762 aa15.06■□□□□ 0
EXOSC9-202ENST00000379663 RWDD1Q9H446 243 aaPredicted RBP15.06■□□□□ 0
EXOSC9-202ENST00000379663 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
EXOSC9-202ENST00000379663 COL15A1P39059 1388 aa15.06■□□□□ 0
EXOSC9-202ENST00000379663 TRIM37O94972 964 aa15.05■□□□□ -0
EXOSC9-202ENST00000379663 GNAI2P04899 355 aa15.05■□□□□ -0
EXOSC9-202ENST00000379663 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
EXOSC9-202ENST00000379663 RC3H1Q5TC82 1133 aaKnown RBP15.05■□□□□ -0
EXOSC9-202ENST00000379663 RPAP2Q8IXW5 612 aaPredicted RBP15.05■□□□□ -0
EXOSC9-202ENST00000379663 ANKRD44Q8N8A2 993 aa15.05■□□□□ -0
EXOSC9-202ENST00000379663 MYD88Q99836 296 aa15.05■□□□□ -0
EXOSC9-202ENST00000379663 CCNL1Q9UK58 526 aaPredicted RBP15.05■□□□□ -0
EXOSC9-202ENST00000379663 DDX60Q8IY21 1712 aaKnown RBP15.05■□□□□ -0
EXOSC9-202ENST00000379663 QSER1Q2KHR3 1735 aa15.04■□□□□ -0
EXOSC9-202ENST00000379663 UBTFL1P0CB47 393 aaPredicted RBP15.04■□□□□ -0
EXOSC9-202ENST00000379663 KIF6Q6ZMV9 814 aa15.04■□□□□ -0
EXOSC9-202ENST00000379663 SMC5Q8IY18 1101 aa15.04■□□□□ -0
EXOSC9-202ENST00000379663 ZBTB3Q9H5J0 574 aa15.04■□□□□ -0
EXOSC9-202ENST00000379663 ERVV-1B6SEH8 477 aa15.03■□□□□ -0
EXOSC9-202ENST00000379663 GRM8O00222 908 aa15.03■□□□□ -0
EXOSC9-202ENST00000379663 GCKRQ14397 625 aa15.03■□□□□ -0
EXOSC9-202ENST00000379663 ISCA1Q9BUE6 129 aa15.03■□□□□ -0
EXOSC9-202ENST00000379663 TRIM28Q13263 835 aaKnown RBP15.02■□□□□ -0
EXOSC9-202ENST00000379663 SLC27A3Q5K4L6 730 aa15.02■□□□□ -0
EXOSC9-202ENST00000379663 GIGYF2Q6Y7W6 1299 aaKnown RBP15.02■□□□□ -0
EXOSC9-202ENST00000379663 ZNF330Q9Y3S2 320 aaPredicted RBP15.02■□□□□ -0
EXOSC9-202ENST00000379663 LRRFIP2Q9Y608 721 aaKnown RBP15.02■□□□□ -0
EXOSC9-202ENST00000379663 KCNQ4P56696 695 aa15.02□□□□□ -0.01
EXOSC9-202ENST00000379663 TCIRG1Q13488 830 aa15.02□□□□□ -0.01
EXOSC9-202ENST00000379663 POLA2Q14181 598 aa15.02□□□□□ -0.01
EXOSC9-202ENST00000379663 DZIP3Q86Y13 1208 aaKnown RBP15.02□□□□□ -0.01
EXOSC9-202ENST00000379663 LRRC4BQ9NT99 713 aa15.02□□□□□ -0.01
EXOSC9-202ENST00000379663 PLSCR1O15162 318 aa15.01□□□□□ -0.01
EXOSC9-202ENST00000379663 RGL2O15211 777 aa15.01□□□□□ -0.01
EXOSC9-202ENST00000379663 MTX1Q13505 466 aa15.01□□□□□ -0.01
EXOSC9-202ENST00000379663 CCDC191Q8NCU4 936 aa15.01□□□□□ -0.01
EXOSC9-202ENST00000379663 C9orf78Q9NZ63 289 aaPredicted RBP15.01□□□□□ -0.01
EXOSC9-202ENST00000379663 ATP5J2-PTCD1G3V325 749 aa15□□□□□ -0.01
EXOSC9-202ENST00000379663 CASP7P55210 303 aa15□□□□□ -0.01
EXOSC9-202ENST00000379663 HLFQ16534 295 aa15□□□□□ -0.01
EXOSC9-202ENST00000379663 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
EXOSC9-202ENST00000379663 KAZALD1Q96I82 304 aa15□□□□□ -0.01
EXOSC9-202ENST00000379663 RPS6KA4O75676 772 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms