RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 PRR5LQ6MZQ0 368 aa17.24■□□□□ 0.35
CCL19-202ENST00000378800 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
CCL19-202ENST00000378800 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
CCL19-202ENST00000378800 RGL2O15211 777 aa17.23■□□□□ 0.35
CCL19-202ENST00000378800 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
CCL19-202ENST00000378800 NIP7Q9Y221 180 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCL19-202ENST00000378800 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
CCL19-202ENST00000378800 HDGFL1Q5TGJ6 251 aa17.22■□□□□ 0.35
CCL19-202ENST00000378800 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
CCL19-202ENST00000378800 TSR2Q969E8 191 aaKnown RBP17.22■□□□□ 0.35
CCL19-202ENST00000378800 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCL19-202ENST00000378800 CHPF2Q9P2E5 772 aa17.22■□□□□ 0.35
CCL19-202ENST00000378800 BCS1LQ9Y276 419 aa17.22■□□□□ 0.35
CCL19-202ENST00000378800 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
CCL19-202ENST00000378800 HOXB7P09629 217 aa17.21■□□□□ 0.35
CCL19-202ENST00000378800 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
CCL19-202ENST00000378800 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
CCL19-202ENST00000378800 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
CCL19-202ENST00000378800 PIM2Q9P1W9 311 aa17.21■□□□□ 0.35
CCL19-202ENST00000378800 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
CCL19-202ENST00000378800 AIMP1Q12904 312 aaKnown RBP17.2■□□□□ 0.34
CCL19-202ENST00000378800 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
CCL19-202ENST00000378800 C2CD5Q86YS7 1000 aa17.2■□□□□ 0.34
CCL19-202ENST00000378800 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
CCL19-202ENST00000378800 GPTP24298 496 aa17.19■□□□□ 0.34
CCL19-202ENST00000378800 GIGYF2Q6Y7W6 1299 aaKnown RBP17.19■□□□□ 0.34
CCL19-202ENST00000378800 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
CCL19-202ENST00000378800 CNBD1Q8NA66 436 aa17.19■□□□□ 0.34
CCL19-202ENST00000378800 IL16Q14005 1332 aa17.19■□□□□ 0.34
CCL19-202ENST00000378800 H0YIN7 160 aa17.18■□□□□ 0.34
CCL19-202ENST00000378800 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
CCL19-202ENST00000378800 TPTE2Q6XPS3 522 aa17.18■□□□□ 0.34
CCL19-202ENST00000378800 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
CCL19-202ENST00000378800 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
CCL19-202ENST00000378800 DBF4Q9UBU7 674 aaPredicted RBP17.18■□□□□ 0.34
CCL19-202ENST00000378800 PDE6BP35913 854 aa17.17■□□□□ 0.34
CCL19-202ENST00000378800 UBN2Q6ZU65 1347 aa17.17■□□□□ 0.34
CCL19-202ENST00000378800 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
CCL19-202ENST00000378800 NPHP1O15259 732 aa17.16■□□□□ 0.34
CCL19-202ENST00000378800 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
CCL19-202ENST00000378800 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
CCL19-202ENST00000378800 ST5P78524 1137 aa17.15■□□□□ 0.34
CCL19-202ENST00000378800 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
CCL19-202ENST00000378800 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCL19-202ENST00000378800 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
CCL19-202ENST00000378800 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
CCL19-202ENST00000378800 KIAA1551Q9HCM1 1747 aa17.14■□□□□ 0.33
CCL19-202ENST00000378800 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
CCL19-202ENST00000378800 ERFEQ4G0M1 354 aa17.14■□□□□ 0.33
CCL19-202ENST00000378800 NUTM1Q86Y26 1132 aa17.14■□□□□ 0.33
CCL19-202ENST00000378800 MIER1Q8N108 512 aa17.14■□□□□ 0.33
CCL19-202ENST00000378800 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
CCL19-202ENST00000378800 PHAXQ9H814 394 aaKnown RBP17.14■□□□□ 0.33
CCL19-202ENST00000378800 GOLGB1Q14789 3259 aaKnown RBP17.14■□□□□ 0.33
CCL19-202ENST00000378800 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
CCL19-202ENST00000378800 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 LAMB4A4D0S4 1761 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 KLRG2A4D1S0 409 aaPredicted RBP17.13■□□□□ 0.33
CCL19-202ENST00000378800 SRGNP10124 158 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
CCL19-202ENST00000378800 TCIRG1Q13488 830 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 UTRNP46939 3433 aa17.13■□□□□ 0.33
CCL19-202ENST00000378800 NTSR2O95665 410 aa17.12■□□□□ 0.33
CCL19-202ENST00000378800 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
CCL19-202ENST00000378800 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
CCL19-202ENST00000378800 ZNF784Q8NCA9 323 aaPredicted RBP17.12■□□□□ 0.33
CCL19-202ENST00000378800 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
CCL19-202ENST00000378800 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
CCL19-202ENST00000378800 PDZRN3Q9UPQ7 1066 aa17.12■□□□□ 0.33
CCL19-202ENST00000378800 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
CCL19-202ENST00000378800 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
CCL19-202ENST00000378800 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
CCL19-202ENST00000378800 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
CCL19-202ENST00000378800 NLRP10Q86W26 655 aa17.11■□□□□ 0.33
CCL19-202ENST00000378800 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
CCL19-202ENST00000378800 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
CCL19-202ENST00000378800 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
CCL19-202ENST00000378800 SYNE4Q8N205 404 aa17.1■□□□□ 0.33
CCL19-202ENST00000378800 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
CCL19-202ENST00000378800 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
CCL19-202ENST00000378800 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
CCL19-202ENST00000378800 VAMP4O75379 141 aa17.09■□□□□ 0.33
CCL19-202ENST00000378800 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
CCL19-202ENST00000378800 C3orf67Q6ZVT6 689 aa17.09■□□□□ 0.33
CCL19-202ENST00000378800 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
CCL19-202ENST00000378800 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
CCL19-202ENST00000378800 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
CCL19-202ENST00000378800 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
CCL19-202ENST00000378800 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.32
CCL19-202ENST00000378800 C21orf2O43822 256 aa17.08■□□□□ 0.32
CCL19-202ENST00000378800 NPR1P16066 1061 aa17.08■□□□□ 0.32
CCL19-202ENST00000378800 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
CCL19-202ENST00000378800 G2E3Q7L622 706 aa17.08■□□□□ 0.32
CCL19-202ENST00000378800 ISCA1Q9BUE6 129 aa17.08■□□□□ 0.32
CCL19-202ENST00000378800 CHMP4AQ9BY43 222 aa17.08■□□□□ 0.32
CCL19-202ENST00000378800 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
CCL19-202ENST00000378800 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms