RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
NPHP4-201ENST00000378156 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
NPHP4-201ENST00000378156 EVI5LQ96CN4 794 aa17.6■□□□□ 0.41
NPHP4-201ENST00000378156 NAPBQ9H115 298 aa17.6■□□□□ 0.41
NPHP4-201ENST00000378156 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
NPHP4-201ENST00000378156 RHPN1Q8TCX5 695 aa17.6■□□□□ 0.41
NPHP4-201ENST00000378156 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
NPHP4-201ENST00000378156 CEP85Q6P2H3 762 aa17.6■□□□□ 0.41
NPHP4-201ENST00000378156 SLC5A1P13866 664 aa17.59■□□□□ 0.41
NPHP4-201ENST00000378156 NAP1L1P55209 391 aaKnown RBP17.59■□□□□ 0.41
NPHP4-201ENST00000378156 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
NPHP4-201ENST00000378156 PTPRTO14522 1441 aa17.59■□□□□ 0.41
NPHP4-201ENST00000378156 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
NPHP4-201ENST00000378156 CCDC183Q5T5S1 534 aa17.59■□□□□ 0.41
NPHP4-201ENST00000378156 WASF1Q92558 559 aa17.59■□□□□ 0.41
NPHP4-201ENST00000378156 PRM3Q9NNZ6 103 aa17.59■□□□□ 0.41
NPHP4-201ENST00000378156 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
NPHP4-201ENST00000378156 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
NPHP4-201ENST00000378156 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
NPHP4-201ENST00000378156 MINDY4BA8MYZ0 360 aa17.58■□□□□ 0.41
NPHP4-201ENST00000378156 CCAR1Q8IX12 1150 aaKnown RBP17.58■□□□□ 0.41
NPHP4-201ENST00000378156 SLC39A6Q13433 755 aa17.58■□□□□ 0.4
NPHP4-201ENST00000378156 ADGBQ8N7X0 1667 aa17.58■□□□□ 0.4
NPHP4-201ENST00000378156 ABCC1P33527 1531 aa17.58■□□□□ 0.4
NPHP4-201ENST00000378156 KRT18P05783 430 aaKnown RBP17.58■□□□□ 0.4
NPHP4-201ENST00000378156 KDM5CP41229 1560 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 HMGB1P09429 215 aaKnown RBP17.57■□□□□ 0.4
NPHP4-201ENST00000378156 COPS6Q7L5N1 327 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 CCDC112Q8NEF3 446 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 LRRC59Q96AG4 307 aaKnown RBP17.57■□□□□ 0.4
NPHP4-201ENST00000378156 ESYT1Q9BSJ8 1104 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 ANKIB1Q9P2G1 1089 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 GCP02774 474 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 XAGE3Q8WTP9 111 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 USP25Q9UHP3 1055 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 EYA1Q99502 592 aa17.57■□□□□ 0.4
NPHP4-201ENST00000378156 FILIP1Q7Z7B0 1213 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 MAGEC2Q9UBF1 373 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-201ENST00000378156 STX6O43752 255 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 ZSCAN23Q3MJ62 389 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-201ENST00000378156 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-201ENST00000378156 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 ATP8B2P98198 1209 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
NPHP4-201ENST00000378156 ZNF213O14771 459 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 GJB2P29033 226 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 USP5P45974 858 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 TAF3Q5VWG9 929 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 GOLIM4O00461 696 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 SERPINC1P01008 464 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 MAP3K19Q56UN5 1328 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 ALDH1L1O75891 902 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 SMARCE1Q969G3 411 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
NPHP4-201ENST00000378156 KSR2Q6VAB6 950 aa17.54■□□□□ 0.4
NPHP4-201ENST00000378156 DZIP1Q86YF9 867 aaKnown RBP17.54■□□□□ 0.4
NPHP4-201ENST00000378156 CDC5LQ99459 802 aaKnown RBP17.54■□□□□ 0.4
NPHP4-201ENST00000378156 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
NPHP4-201ENST00000378156 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
NPHP4-201ENST00000378156 RAB3GAP1Q15042 981 aa17.54■□□□□ 0.4
NPHP4-201ENST00000378156 TFIP11Q9UBB9 837 aaKnown RBP17.54■□□□□ 0.4
NPHP4-201ENST00000378156 DACH1Q9UI36 760 aa17.54■□□□□ 0.4
NPHP4-201ENST00000378156 CCDC196A0A1B0GTZ2 297 aa17.54■□□□□ 0.4
NPHP4-201ENST00000378156 PIBF1Q8WXW3 757 aa17.54■□□□□ 0.4
NPHP4-201ENST00000378156 CEP57L1Q8IYX8 460 aa17.53■□□□□ 0.4
NPHP4-201ENST00000378156 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-201ENST00000378156 MKNK2Q9HBH9 465 aa17.53■□□□□ 0.4
NPHP4-201ENST00000378156 TMOD2Q9NZR1 351 aa17.53■□□□□ 0.4
NPHP4-201ENST00000378156 IL13P35225 146 aa17.53■□□□□ 0.4
NPHP4-201ENST00000378156 CKAP2LQ8IYA6 745 aa17.53■□□□□ 0.4
NPHP4-201ENST00000378156 POLR3DP05423 398 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-201ENST00000378156 STIM1Q13586 685 aa17.53■□□□□ 0.4
NPHP4-201ENST00000378156 CT47A1Q5JQC4 288 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-201ENST00000378156 ZGPATQ8N5A5 531 aaKnown RBP17.53■□□□□ 0.4
NPHP4-201ENST00000378156 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
NPHP4-201ENST00000378156 GRM8O00222 908 aa17.52■□□□□ 0.4
NPHP4-201ENST00000378156 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
NPHP4-201ENST00000378156 HSPA2P54652 639 aa17.52■□□□□ 0.39
NPHP4-201ENST00000378156 ATP10AO60312 1499 aa17.51■□□□□ 0.39
NPHP4-201ENST00000378156 TRPM2O94759 1503 aa17.51■□□□□ 0.39
NPHP4-201ENST00000378156 TTLL5Q6EMB2 1281 aa17.51■□□□□ 0.39
NPHP4-201ENST00000378156 G2E3Q7L622 706 aa17.51■□□□□ 0.39
NPHP4-201ENST00000378156 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
NPHP4-201ENST00000378156 IQCA1Q86XH1 822 aa17.51■□□□□ 0.39
NPHP4-201ENST00000378156 TOM1O60784 492 aa17.51■□□□□ 0.39
NPHP4-201ENST00000378156 TTF1Q15361 905 aaPredicted RBP17.51■□□□□ 0.39
NPHP4-201ENST00000378156 NFATC2IPQ8NCF5 419 aa17.51■□□□□ 0.39
NPHP4-201ENST00000378156 RNF41Q9H4P4 317 aaPredicted RBP17.51■□□□□ 0.39
NPHP4-201ENST00000378156 ERLIN1O75477 346 aa17.5■□□□□ 0.39
NPHP4-201ENST00000378156 NECAB1Q8N987 351 aa17.5■□□□□ 0.39
NPHP4-201ENST00000378156 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
NPHP4-201ENST00000378156 IP6K1Q92551 441 aa17.5■□□□□ 0.39
NPHP4-201ENST00000378156 TCEANC2Q96MN5 208 aa17.5■□□□□ 0.39
NPHP4-201ENST00000378156 RANBP6O60518 1105 aaKnown RBP17.5■□□□□ 0.39
NPHP4-201ENST00000378156 HOXC9P31274 260 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms