RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 KIF6Q6ZMV9 814 aa24.9■■□□□ 1.58
AUP1-201ENST00000377526 ZBTB3Q9H5J0 574 aa24.9■■□□□ 1.58
AUP1-201ENST00000377526 COL23A1Q86Y22 540 aaPredicted RBP24.89■■□□□ 1.58
AUP1-201ENST00000377526 SRP68Q9UHB9 627 aaKnown RBP24.89■■□□□ 1.58
AUP1-201ENST00000377526 MAP3K15Q6ZN16 1313 aa24.89■■□□□ 1.57
AUP1-201ENST00000377526 PI4KAP2A4QPH2 592 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 CAMTA2O94983 1202 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 ANKRD13DQ6ZTN6 518 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 PI4KAP1Q8N8J0 262 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 NUP98P52948 1817 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 F6X3S4 739 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 DDX58O95786 925 aaKnown RBP24.88■■□□□ 1.57
AUP1-201ENST00000377526 KSR2Q6VAB6 950 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 PLBD2Q8NHP8 589 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 ARHGAP45Q92619 1136 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 NARFQ9UHQ1 456 aa24.88■■□□□ 1.57
AUP1-201ENST00000377526 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
AUP1-201ENST00000377526 SOCS7O14512 581 aa24.87■■□□□ 1.57
AUP1-201ENST00000377526 TRIM27P14373 513 aa24.87■■□□□ 1.57
AUP1-201ENST00000377526 RFC4P35249 363 aa24.87■■□□□ 1.57
AUP1-201ENST00000377526 RRP1P56182 461 aaKnown RBP24.87■■□□□ 1.57
AUP1-201ENST00000377526 HLFQ16534 295 aa24.87■■□□□ 1.57
AUP1-201ENST00000377526 ZKSCAN2Q63HK3 967 aa24.87■■□□□ 1.57
AUP1-201ENST00000377526 ATF7IPQ6VMQ6 1270 aa24.87■■□□□ 1.57
AUP1-201ENST00000377526 USP42Q9H9J4 1324 aaKnown RBP24.87■■□□□ 1.57
AUP1-201ENST00000377526 RIC3Q7Z5B4 369 aa24.86■■□□□ 1.57
AUP1-201ENST00000377526 FLAD1Q8NFF5 587 aa24.86■■□□□ 1.57
AUP1-201ENST00000377526 MAP3K2Q9Y2U5 619 aa24.86■■□□□ 1.57
AUP1-201ENST00000377526 RNF123Q5XPI4 1314 aa24.86■■□□□ 1.57
AUP1-201ENST00000377526 IPO8O15397 1037 aaKnown RBP24.85■■□□□ 1.57
AUP1-201ENST00000377526 USPL1Q5W0Q7 1092 aa24.85■■□□□ 1.57
AUP1-201ENST00000377526 BCL2L12Q9HB09 334 aa24.85■■□□□ 1.57
AUP1-201ENST00000377526 ANKRD36CQ5JPF3 1778 aa24.85■■□□□ 1.57
AUP1-201ENST00000377526 ERVV-1B6SEH8 477 aa24.85■■□□□ 1.57
AUP1-201ENST00000377526 API5Q9BZZ5 524 aaKnown RBP24.85■■□□□ 1.57
AUP1-201ENST00000377526 PDGFDQ9GZP0 370 aaPredicted RBP24.85■■□□□ 1.57
AUP1-201ENST00000377526 DNAAF4Q8WXU2 420 aa24.84■■□□□ 1.57
AUP1-201ENST00000377526 N4BP2Q86UW6 1770 aaPredicted RBP24.83■■□□□ 1.57
AUP1-201ENST00000377526 MSH5O43196 834 aa24.83■■□□□ 1.57
AUP1-201ENST00000377526 ZPR1O75312 459 aa24.83■■□□□ 1.57
AUP1-201ENST00000377526 GIGYF2Q6Y7W6 1299 aaKnown RBP24.83■■□□□ 1.57
AUP1-201ENST00000377526 CLUAP1Q96AJ1 413 aa24.83■■□□□ 1.57
AUP1-201ENST00000377526 CASZ1Q86V15 1759 aa24.82■■□□□ 1.56
AUP1-201ENST00000377526 ABCC4O15439 1325 aa24.82■■□□□ 1.56
AUP1-201ENST00000377526 R3HDM1Q15032 1099 aaKnown RBP24.82■■□□□ 1.56
AUP1-201ENST00000377526 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.82■■□□□ 1.56
AUP1-201ENST00000377526 GYS1P13807 737 aa24.81■■□□□ 1.56
AUP1-201ENST00000377526 METTL22Q9BUU2 404 aaPredicted RBP24.81■■□□□ 1.56
AUP1-201ENST00000377526 PXDNLA1KZ92 1463 aa24.81■■□□□ 1.56
AUP1-201ENST00000377526 RLBP1P12271 317 aa24.81■■□□□ 1.56
AUP1-201ENST00000377526 C20orf194Q5TEA3 1177 aa24.8■■□□□ 1.56
AUP1-201ENST00000377526 SLC4A10Q6U841 1118 aa24.8■■□□□ 1.56
AUP1-201ENST00000377526 MYD88Q99836 296 aa24.8■■□□□ 1.56
AUP1-201ENST00000377526 AFDNP55196 1824 aaKnown RBP24.79■■□□□ 1.56
AUP1-201ENST00000377526 RGL2O15211 777 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 FKBP8Q14318 412 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 CLEC4GQ6UXB4 293 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 DZIP1LQ8IYY4 767 aaKnown RBP24.78■■□□□ 1.56
AUP1-201ENST00000377526 PANK1Q8TE04 598 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 ATP10DQ9P241 1426 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 PSDA5PKW4 1024 aaPredicted RBP24.78■■□□□ 1.56
AUP1-201ENST00000377526 IGKV5-2P06315 115 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 TCIRG1Q13488 830 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 BEND3Q5T5X7 828 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 ZNF652Q9Y2D9 606 aa24.78■■□□□ 1.56
AUP1-201ENST00000377526 ATP5J2-PTCD1G3V325 749 aa24.77■■□□□ 1.56
AUP1-201ENST00000377526 FTSJ3Q8IY81 847 aaKnown RBP24.77■■□□□ 1.56
AUP1-201ENST00000377526 TBC1D9BQ66K14 1250 aa24.76■■□□□ 1.55
AUP1-201ENST00000377526 TMEM57Q8N5G2 664 aa24.76■■□□□ 1.55
AUP1-201ENST00000377526 ISCA1Q9BUE6 129 aa24.76■■□□□ 1.55
AUP1-201ENST00000377526 GPTP24298 496 aa24.75■■□□□ 1.55
AUP1-201ENST00000377526 CWF19L2Q2TBE0 894 aaKnown RBP24.75■■□□□ 1.55
AUP1-201ENST00000377526 HSP90AB3PQ58FF7 597 aa24.75■■□□□ 1.55
AUP1-201ENST00000377526 ZNF34Q8IZ26 560 aa24.75■■□□□ 1.55
AUP1-201ENST00000377526 UBN2Q6ZU65 1347 aa24.75■■□□□ 1.55
AUP1-201ENST00000377526 COL24A1Q17RW2 1714 aa24.75■■□□□ 1.55
AUP1-201ENST00000377526 NEXNQ0ZGT2 675 aa24.75■■□□□ 1.55
AUP1-201ENST00000377526 PDE3AQ14432 1141 aa24.74■■□□□ 1.55
AUP1-201ENST00000377526 MSL1Q68DK7 614 aa24.74■■□□□ 1.55
AUP1-201ENST00000377526 INTS3Q68E01 1043 aaKnown RBP24.74■■□□□ 1.55
AUP1-201ENST00000377526 LINS1Q8NG48 757 aa24.74■■□□□ 1.55
AUP1-201ENST00000377526 NEURL1BA8MQ27 555 aa24.73■■□□□ 1.55
AUP1-201ENST00000377526 BICDL1Q6ZP65 573 aa24.73■■□□□ 1.55
AUP1-201ENST00000377526 SRCIN1Q9C0H9 1055 aa24.73■■□□□ 1.55
AUP1-201ENST00000377526 NIP7Q9Y221 180 aaKnown RBP eCLIP24.73■■□□□ 1.55
AUP1-201ENST00000377526 MS4A1P11836 297 aa24.72■■□□□ 1.55
AUP1-201ENST00000377526 CCT4P50991 539 aaKnown RBP24.72■■□□□ 1.55
AUP1-201ENST00000377526 NFIXQ14938 502 aa24.72■■□□□ 1.55
AUP1-201ENST00000377526 TRIM28Q13263 835 aaKnown RBP24.72■■□□□ 1.55
AUP1-201ENST00000377526 NLRP10Q86W26 655 aa24.72■■□□□ 1.55
AUP1-201ENST00000377526 TM4SF1P30408 202 aa24.7■■□□□ 1.54
AUP1-201ENST00000377526 NLGN1Q8N2Q7 840 aa24.7■■□□□ 1.54
AUP1-201ENST00000377526 SLC16A10Q8TF71 515 aa24.7■■□□□ 1.54
AUP1-201ENST00000377526 COG6Q9Y2V7 657 aa24.7■■□□□ 1.54
AUP1-201ENST00000377526 ALDH1L1O75891 902 aa24.69■■□□□ 1.54
AUP1-201ENST00000377526 CCDC191Q8NCU4 936 aa24.69■■□□□ 1.54
AUP1-201ENST00000377526 DDR1Q08345 913 aa24.69■■□□□ 1.54
AUP1-201ENST00000377526 GCKRQ14397 625 aa24.69■■□□□ 1.54
AUP1-201ENST00000377526 ITPRIPQ8IWB1 547 aa24.69■■□□□ 1.54
AUP1-201ENST00000377526 SETDB2Q96T68 719 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms