RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 CCDC8Q9H0W5 538 aaPredicted RBP21.81■■□□□ 1.08
SF1-203ENST00000377387 TUBGCP6Q96RT7 1819 aa21.8■■□□□ 1.08
SF1-203ENST00000377387 PLEKHO1Q53GL0 409 aaPredicted RBP21.8■■□□□ 1.08
SF1-203ENST00000377387 HSP90AB4PQ58FF6 505 aa21.8■■□□□ 1.08
SF1-203ENST00000377387 DBF4Q9UBU7 674 aaPredicted RBP21.8■■□□□ 1.08
SF1-203ENST00000377387 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
SF1-203ENST00000377387 RPAP1Q9BWH6 1393 aaPredicted RBP21.8■■□□□ 1.08
SF1-203ENST00000377387 STX6O43752 255 aa21.8■■□□□ 1.08
SF1-203ENST00000377387 CACNA1FO60840 1977 aa21.8■■□□□ 1.08
SF1-203ENST00000377387 PLCB2Q00722 1185 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 AKAP4Q5JQC9 854 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 ZSCAN22P10073 491 aaPredicted RBP21.79■■□□□ 1.08
SF1-203ENST00000377387 RBM10P98175 930 aaKnown RBP21.79■■□□□ 1.08
SF1-203ENST00000377387 NECAB1Q8N987 351 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 UBE2Q2Q8WVN8 375 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 PXDNLA1KZ92 1463 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 KLHDC4Q8TBB5 520 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
SF1-203ENST00000377387 TCEANC2Q96MN5 208 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 ECHDC1Q9NTX5 307 aa21.79■■□□□ 1.08
SF1-203ENST00000377387 RNMTO43148 476 aaKnown RBP21.78■■□□□ 1.08
SF1-203ENST00000377387 ZKSCAN5Q9Y2L8 839 aa21.78■■□□□ 1.08
SF1-203ENST00000377387 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.78■■□□□ 1.08
SF1-203ENST00000377387 PDRG1Q9NUG6 133 aa21.78■■□□□ 1.08
SF1-203ENST00000377387 VPS37CA5D8V6 355 aaPredicted RBP21.77■■□□□ 1.08
SF1-203ENST00000377387 COL9A3Q14050 684 aaPredicted RBP21.77■■□□□ 1.08
SF1-203ENST00000377387 JARID2Q92833 1246 aaPredicted RBP21.77■■□□□ 1.08
SF1-203ENST00000377387 FAM227BQ96M60 508 aa21.77■■□□□ 1.08
SF1-203ENST00000377387 ZNF830Q96NB3 372 aaPredicted RBP21.77■■□□□ 1.08
SF1-203ENST00000377387 GJB2P29033 226 aa21.77■■□□□ 1.08
SF1-203ENST00000377387 CHMP3Q9Y3E7 222 aa21.77■■□□□ 1.08
SF1-203ENST00000377387 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.77■■□□□ 1.08
SF1-203ENST00000377387 ANKARQ7Z5J8 1434 aa21.77■■□□□ 1.08
SF1-203ENST00000377387 GIGYF1O75420 1035 aaPredicted RBP21.76■■□□□ 1.07
SF1-203ENST00000377387 SLC39A6Q13433 755 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 HS1BP3Q53T59 392 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 USP25Q9UHP3 1055 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 MYL6BP14649 208 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 RUFY2Q8WXA3 655 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 SUCLG2Q96I99 432 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 BOLA2Q9H3K6 86 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 HYPKQ9NX55 129 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 CCDC39Q9UFE4 941 aa21.76■■□□□ 1.07
SF1-203ENST00000377387 HCLS1P14317 486 aaPredicted RBP21.75■■□□□ 1.07
SF1-203ENST00000377387 DNM1Q05193 864 aaKnown RBP21.75■■□□□ 1.07
SF1-203ENST00000377387 KSR2Q6VAB6 950 aa21.75■■□□□ 1.07
SF1-203ENST00000377387 TLR7Q9NYK1 1049 aaKnown RBP21.75■■□□□ 1.07
SF1-203ENST00000377387 GCP02774 474 aa21.75■■□□□ 1.07
SF1-203ENST00000377387 TPM2P07951 284 aa21.75■■□□□ 1.07
SF1-203ENST00000377387 F13A1P00488 732 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 PIP4K2AP48426 406 aaPredicted RBP21.74■■□□□ 1.07
SF1-203ENST00000377387 ZC3H6P61129 1189 aaKnown RBP21.74■■□□□ 1.07
SF1-203ENST00000377387 IL17RAQ96F46 866 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 BICC1Q9H694 974 aaKnown RBP21.74■■□□□ 1.07
SF1-203ENST00000377387 TTC41PQ6P2S7 1318 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 PHF14O94880 888 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 HOXB7P09629 217 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 GPATCH3Q96I76 525 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 CYP46A1Q9Y6A2 500 aa21.74■■□□□ 1.07
SF1-203ENST00000377387 MARF1Q9Y4F3 1742 aaKnown RBP21.74■■□□□ 1.07
SF1-203ENST00000377387 G3BP1Q13283 466 aaKnown RBP eCLIP21.73■■□□□ 1.075e-7■□□□□ 9.3
SF1-203ENST00000377387 ANKRD24Q8TF21 1146 aa21.73■■□□□ 1.07
SF1-203ENST00000377387 EAF2Q96CJ1 260 aaPredicted RBP21.73■■□□□ 1.07
SF1-203ENST00000377387 GIMAP6Q6P9H5 292 aa21.73■■□□□ 1.07
SF1-203ENST00000377387 FERMT3Q86UX7 667 aa21.73■■□□□ 1.07
SF1-203ENST00000377387 KCNH5Q8NCM2 988 aa21.73■■□□□ 1.07
SF1-203ENST00000377387 RBM8AQ9Y5S9 174 aaKnown RBP21.73■■□□□ 1.07
SF1-203ENST00000377387 RRP9O43818 475 aaKnown RBP21.72■■□□□ 1.07
SF1-203ENST00000377387 SASH1O94885 1247 aa21.72■■□□□ 1.07
SF1-203ENST00000377387 NMIQ13287 307 aaPredicted RBP21.72■■□□□ 1.07
SF1-203ENST00000377387 FAM173BQ6P4H8 233 aa21.72■■□□□ 1.07
SF1-203ENST00000377387 ZNF500O60304 480 aaPredicted RBP21.72■■□□□ 1.07
SF1-203ENST00000377387 ME3Q16798 604 aa21.72■■□□□ 1.07
SF1-203ENST00000377387 EDC3Q96F86 508 aaKnown RBP21.72■■□□□ 1.07
SF1-203ENST00000377387 CCDC183Q5T5S1 534 aa21.71■■□□□ 1.07
SF1-203ENST00000377387 RIC3Q7Z5B4 369 aa21.71■■□□□ 1.07
SF1-203ENST00000377387 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
SF1-203ENST00000377387 LTN1O94822 1766 aa21.71■■□□□ 1.07
SF1-203ENST00000377387 GRM8O00222 908 aa21.71■■□□□ 1.07
SF1-203ENST00000377387 EPB41L2O43491 1005 aaKnown RBP21.71■■□□□ 1.07
SF1-203ENST00000377387 KAZALD1Q96I82 304 aa21.71■■□□□ 1.07
SF1-203ENST00000377387 RGPD2P0DJD1 1756 aa21.7■■□□□ 1.07
SF1-203ENST00000377387 ZKSCAN1P17029 563 aaPredicted RBP21.7■■□□□ 1.06
SF1-203ENST00000377387 FAM13BQ9NYF5 915 aa21.7■■□□□ 1.06
SF1-203ENST00000377387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.7■■□□□ 1.068e-9■□□□□ 10.7
SF1-203ENST00000377387 PXDNQ92626 1479 aa21.7■■□□□ 1.06
SF1-203ENST00000377387 EVI5LQ96CN4 794 aa21.7■■□□□ 1.06
SF1-203ENST00000377387 FSD1Q9BTV5 496 aa21.7■■□□□ 1.06
SF1-203ENST00000377387 CHMP4AQ9BY43 222 aa21.7■■□□□ 1.06
SF1-203ENST00000377387 TAF6LQ9Y6J9 622 aa21.7■■□□□ 1.06
SF1-203ENST00000377387 NDUFB9Q9Y6M9 179 aa21.7■■□□□ 1.06
SF1-203ENST00000377387 UBE2HP62256 183 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 AMOTQ4VCS5 1084 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 CREB3L3Q68CJ9 461 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 ARID3AQ99856 593 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 STK3Q13188 491 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 MTX1Q13505 466 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 CCDC171Q6TFL3 1326 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms