RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 C1orf167Q5SNV9 1468 aa7.8□□□□□ -1.16
SSX1-201ENST00000376919 PER1O15534 1290 aaPredicted RBP7.79□□□□□ -1.16
SSX1-201ENST00000376919 FMNL1O95466 1100 aaPredicted RBP7.79□□□□□ -1.16
SSX1-201ENST00000376919 TMEM164Q5U3C3 297 aa7.79□□□□□ -1.16
SSX1-201ENST00000376919 THSD4Q6ZMP0 1018 aa7.79□□□□□ -1.16
SSX1-201ENST00000376919 EPS8L1Q8TE68 723 aa7.79□□□□□ -1.16
SSX1-201ENST00000376919 THAP11Q96EK4 314 aa7.79□□□□□ -1.16
SSX1-201ENST00000376919 GPRASP1Q5JY77 1395 aa7.79□□□□□ -1.16
SSX1-201ENST00000376919 EVC2Q86UK5 1308 aa7.78□□□□□ -1.16
SSX1-201ENST00000376919 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
SSX1-201ENST00000376919 USP32Q8NFA0 1604 aa7.78□□□□□ -1.16
SSX1-201ENST00000376919 LYPD8Q6UX82 237 aa7.78□□□□□ -1.16
SSX1-201ENST00000376919 ZMIZ1Q9ULJ6 1067 aa7.78□□□□□ -1.16
SSX1-201ENST00000376919 TOPAZ1Q8N9V7 1692 aa7.78□□□□□ -1.16
SSX1-201ENST00000376919 AHDC1Q5TGY3 1603 aaPredicted RBP7.78□□□□□ -1.16
SSX1-201ENST00000376919 WASLO00401 505 aaPredicted RBP7.77□□□□□ -1.17
SSX1-201ENST00000376919 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
SSX1-201ENST00000376919 ARID4AP29374 1257 aaPredicted RBP7.77□□□□□ -1.17
SSX1-201ENST00000376919 HSPA1LP34931 641 aa7.77□□□□□ -1.17
SSX1-201ENST00000376919 NR6A1Q15406 480 aa7.77□□□□□ -1.17
SSX1-201ENST00000376919 POTEGQ6S5H5 508 aa7.77□□□□□ -1.17
SSX1-201ENST00000376919 BRINP3Q76B58 766 aa7.77□□□□□ -1.17
SSX1-201ENST00000376919 STK32AQ8WU08 396 aa7.77□□□□□ -1.17
SSX1-201ENST00000376919 COL16A1Q07092 1604 aaPredicted RBP7.77□□□□□ -1.17
SSX1-201ENST00000376919 NPHP3Q7Z494 1330 aa7.77□□□□□ -1.17
SSX1-201ENST00000376919 ATP7BP35670 1465 aa7.76□□□□□ -1.17
SSX1-201ENST00000376919 DNAJC14Q6Y2X3 702 aaPredicted RBP7.76□□□□□ -1.17
SSX1-201ENST00000376919 NFATC2IPQ8NCF5 419 aa7.76□□□□□ -1.17
SSX1-201ENST00000376919 KCTD12Q96CX2 325 aaKnown RBP7.76□□□□□ -1.17
SSX1-201ENST00000376919 MRRFQ96E11 262 aaKnown RBP7.76□□□□□ -1.17
SSX1-201ENST00000376919 ORAI2Q96SN7 254 aa7.76□□□□□ -1.17
SSX1-201ENST00000376919 POLR3GLQ9BT43 218 aa7.76□□□□□ -1.17
SSX1-201ENST00000376919 CDK19Q9BWU1 502 aa7.76□□□□□ -1.17
SSX1-201ENST00000376919 NOVA2Q9UNW9 492 aaKnown RBP7.76□□□□□ -1.17
SSX1-201ENST00000376919 ST20-MTHFSA0A0A6YYL1 179 aa7.75□□□□□ -1.17
SSX1-201ENST00000376919 NR1H3Q13133 447 aa7.75□□□□□ -1.17
SSX1-201ENST00000376919 NYAP1Q6ZVC0 841 aa7.75□□□□□ -1.17
SSX1-201ENST00000376919 NGDNQ8NEJ9 315 aaKnown RBP7.75□□□□□ -1.17
SSX1-201ENST00000376919 PMFBP1Q8TBY8 1022 aa7.75□□□□□ -1.17
SSX1-201ENST00000376919 SHPRHQ149N8 1683 aa7.75□□□□□ -1.17
SSX1-201ENST00000376919 PPIP5K1Q6PFW1 1433 aa7.75□□□□□ -1.17
SSX1-201ENST00000376919 ATAD2Q6PL18 1390 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 FOXO3O43524 673 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 JUNDP17535 347 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 TMF1P82094 1093 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 XPCQ01831 940 aaPredicted RBP7.74□□□□□ -1.17
SSX1-201ENST00000376919 PSME1Q06323 249 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 MSS51Q4VC12 460 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 PHLDB3Q6NSJ2 640 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 TMC1Q8TDI8 760 aa7.74□□□□□ -1.17
SSX1-201ENST00000376919 DDX17Q92841 729 aaKnown RBP7.74□□□□□ -1.17
SSX1-201ENST00000376919 NUDT16Q96DE0 195 aaKnown RBP7.74□□□□□ -1.17
SSX1-201ENST00000376919 PUS7Q96PZ0 661 aaKnown RBP7.74□□□□□ -1.17
SSX1-201ENST00000376919 KIAA1522Q9P206 1035 aaPredicted RBP7.74□□□□□ -1.17
SSX1-201ENST00000376919 SBNO2Q9Y2G9 1366 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 USP17L3A6NCW0 530 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 USP17L4A6NCW7 530 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 FAM196BA6NMK8 535 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 SSFA2P28290 1259 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 COPS2P61201 443 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 PTPRNQ16849 979 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 MEX3CQ5U5Q3 659 aaKnown RBP7.73□□□□□ -1.17
SSX1-201ENST00000376919 USP17L2Q6R6M4 530 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 USP17L1Q7RTZ2 530 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 AKAP12Q02952 1782 aa7.73□□□□□ -1.17
SSX1-201ENST00000376919 JCADQ9P266 1359 aa7.72□□□□□ -1.17
SSX1-201ENST00000376919 F12P00748 615 aaPredicted RBP7.72□□□□□ -1.17
SSX1-201ENST00000376919 ZEB1P37275 1124 aaPredicted RBP7.72□□□□□ -1.17
SSX1-201ENST00000376919 FAM160A2Q8N612 972 aaPredicted RBP7.72□□□□□ -1.17
SSX1-201ENST00000376919 LRRC59Q96AG4 307 aaKnown RBP7.72□□□□□ -1.17
SSX1-201ENST00000376919 SPSB2Q99619 263 aa7.72□□□□□ -1.17
SSX1-201ENST00000376919 PRR36Q9H6K5 1346 aa7.72□□□□□ -1.17
SSX1-201ENST00000376919 MED1Q15648 1581 aaPredicted RBP7.71□□□□□ -1.17
SSX1-201ENST00000376919 TNS3Q68CZ2 1445 aa7.71□□□□□ -1.17
SSX1-201ENST00000376919 PXDNQ92626 1479 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 USP17L5A8MUK1 530 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 PIK3CDO00329 1044 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 DXOO77932 396 aaKnown RBP7.71□□□□□ -1.18
SSX1-201ENST00000376919 HSPA5P11021 654 aaKnown RBP7.71□□□□□ -1.18
SSX1-201ENST00000376919 ZNF16P17020 682 aaPredicted RBP7.71□□□□□ -1.18
SSX1-201ENST00000376919 KRT28Q7Z3Y7 464 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 CDAN1Q8IWY9 1227 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 BCL2L13Q9BXK5 485 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 MON2Q7Z3U7 1717 aa7.71□□□□□ -1.18
SSX1-201ENST00000376919 TRPM3Q9HCF6 1732 aaPredicted RBP7.71□□□□□ -1.18
SSX1-201ENST00000376919 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L21D6R901 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 SKIP12755 728 aa7.7□□□□□ -1.18
SSX1-201ENST00000376919 MMP16P51512 607 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms