RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
ACTN1-202ENST00000376839 KDM3BQ7LBC6 1761 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 FIBPO43427 364 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-202ENST00000376839 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 F13A1P00488 732 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 CCDC83Q8IWF9 413 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 DDX54Q8TDD1 881 aaKnown RBP15.9■□□□□ 0.14
ACTN1-202ENST00000376839 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
ACTN1-202ENST00000376839 BTBD11A6QL63 1104 aa15.89■□□□□ 0.13
ACTN1-202ENST00000376839 PROSER3Q2NL68 480 aa15.89■□□□□ 0.13
ACTN1-202ENST00000376839 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
ACTN1-202ENST00000376839 USP25Q9UHP3 1055 aa15.89■□□□□ 0.13
ACTN1-202ENST00000376839 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
ACTN1-202ENST00000376839 UQCRHP07919 91 aa15.89■□□□□ 0.13
ACTN1-202ENST00000376839 TEFQ10587 303 aa15.89■□□□□ 0.13
ACTN1-202ENST00000376839 JAKMIP1Q96N16 626 aaKnown RBP15.89■□□□□ 0.13
ACTN1-202ENST00000376839 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-202ENST00000376839 UBE2HP62256 183 aa15.88■□□□□ 0.13
ACTN1-202ENST00000376839 CSPP1Q1MSJ5 1256 aa15.88■□□□□ 0.13
ACTN1-202ENST00000376839 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-202ENST00000376839 CLASRPQ8N2M8 674 aaKnown RBP15.88■□□□□ 0.13
ACTN1-202ENST00000376839 ST3GAL1Q11201 340 aa15.88■□□□□ 0.13
ACTN1-202ENST00000376839 MTX1Q13505 466 aa15.88■□□□□ 0.13
ACTN1-202ENST00000376839 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-202ENST00000376839 RBM33Q96EV2 1170 aaKnown RBP15.88■□□□□ 0.13
ACTN1-202ENST00000376839 PDCL3Q9H2J4 239 aa15.88■□□□□ 0.13
ACTN1-202ENST00000376839 MAP3K2Q9Y2U5 619 aa15.88■□□□□ 0.13
ACTN1-202ENST00000376839 GJB2P29033 226 aa15.87■□□□□ 0.13
ACTN1-202ENST00000376839 CWF19L2Q2TBE0 894 aaKnown RBP15.87■□□□□ 0.13
ACTN1-202ENST00000376839 ZNF830Q96NB3 372 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-202ENST00000376839 ECHDC1Q9NTX5 307 aa15.87■□□□□ 0.13
ACTN1-202ENST00000376839 PHF8Q9UPP1 1060 aa15.87■□□□□ 0.13
ACTN1-202ENST00000376839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-202ENST00000376839 NFAT5O94916 1531 aa15.87■□□□□ 0.13
ACTN1-202ENST00000376839 FAM184AQ8NB25 1140 aa15.87■□□□□ 0.13
ACTN1-202ENST00000376839 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
ACTN1-202ENST00000376839 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
ACTN1-202ENST00000376839 PRAMEF22A3QJZ6 481 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 DNM1Q05193 864 aaKnown RBP15.86■□□□□ 0.13
ACTN1-202ENST00000376839 COL9A3Q14050 684 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-202ENST00000376839 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 C9orf78Q9NZ63 289 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-202ENST00000376839 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 RUFY2Q8WXA3 655 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 FAM13BQ9NYF5 915 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 DBF4Q9UBU7 674 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-202ENST00000376839 IFIT2P09913 472 aaKnown RBP15.86■□□□□ 0.13
ACTN1-202ENST00000376839 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 AKAP4Q5JQC9 854 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 VPS53Q5VIR6 699 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 ZSWIM6Q9HCJ5 1215 aa15.86■□□□□ 0.13
ACTN1-202ENST00000376839 PXDNQ92626 1479 aa15.85■□□□□ 0.13
ACTN1-202ENST00000376839 KIAA2012Q0VF49 1180 aa15.85■□□□□ 0.13
ACTN1-202ENST00000376839 NECAB1Q8N987 351 aa15.85■□□□□ 0.13
ACTN1-202ENST00000376839 ADCY5O95622 1261 aa15.85■□□□□ 0.13
ACTN1-202ENST00000376839 GIMAP6Q6P9H5 292 aa15.85■□□□□ 0.13
ACTN1-202ENST00000376839 AACSQ86V21 672 aa15.85■□□□□ 0.13
ACTN1-202ENST00000376839 FAM227BQ96M60 508 aa15.85■□□□□ 0.13
ACTN1-202ENST00000376839 ME3Q16798 604 aa15.84■□□□□ 0.13
ACTN1-202ENST00000376839 KCNB2Q92953 911 aa15.84■□□□□ 0.13
ACTN1-202ENST00000376839 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
ACTN1-202ENST00000376839 CCDC171Q6TFL3 1326 aa15.84■□□□□ 0.13
ACTN1-202ENST00000376839 NECTIN1Q15223 517 aa15.84■□□□□ 0.13
ACTN1-202ENST00000376839 ATP6V1DQ9Y5K8 247 aa15.84■□□□□ 0.13
ACTN1-202ENST00000376839 LMO7Q8WWI1 1683 aa15.83■□□□□ 0.13
ACTN1-202ENST00000376839 VPS37CA5D8V6 355 aaPredicted RBP15.83■□□□□ 0.13
ACTN1-202ENST00000376839 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.13
ACTN1-202ENST00000376839 SASS6Q6UVJ0 657 aa15.83■□□□□ 0.13
ACTN1-202ENST00000376839 FUCA2Q9BTY2 467 aa15.83■□□□□ 0.13
ACTN1-202ENST00000376839 TM6SF1Q9BZW5 370 aa15.83■□□□□ 0.13
ACTN1-202ENST00000376839 RBM8AQ9Y5S9 174 aaKnown RBP15.83■□□□□ 0.13
ACTN1-202ENST00000376839 RNMTO43148 476 aaKnown RBP15.83■□□□□ 0.12
ACTN1-202ENST00000376839 ALDH1L1O75891 902 aa15.83■□□□□ 0.12
ACTN1-202ENST00000376839 KSR2Q6VAB6 950 aa15.83■□□□□ 0.12
ACTN1-202ENST00000376839 EVI5LQ96CN4 794 aa15.83■□□□□ 0.12
ACTN1-202ENST00000376839 GPATCH3Q96I76 525 aa15.83■□□□□ 0.12
ACTN1-202ENST00000376839 KAZALD1Q96I82 304 aa15.83■□□□□ 0.12
ACTN1-202ENST00000376839 SUCLG2Q96I99 432 aa15.83■□□□□ 0.12
ACTN1-202ENST00000376839 TTC12Q9H892 705 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-202ENST00000376839 SASH1O94885 1247 aa15.82■□□□□ 0.12
ACTN1-202ENST00000376839 LETM1O95202 739 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 PLEKHO1Q53GL0 409 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 CREB3L3Q68CJ9 461 aa15.82■□□□□ 0.12
ACTN1-202ENST00000376839 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
ACTN1-202ENST00000376839 SH2B1Q9NRF2 756 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 NMIQ13287 307 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 C17orf53Q8N3J3 647 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 EAF2Q96CJ1 260 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 CCDC8Q9H0W5 538 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 TLR7Q9NYK1 1049 aaKnown RBP15.82■□□□□ 0.12
ACTN1-202ENST00000376839 TPCN1Q9ULQ1 816 aa15.82■□□□□ 0.12
ACTN1-202ENST00000376839 ERC1Q8IUD2 1116 aa15.81■□□□□ 0.12
ACTN1-202ENST00000376839 ZSCAN31Q96LW9 406 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-202ENST00000376839 BICC1Q9H694 974 aaKnown RBP15.81■□□□□ 0.12
ACTN1-202ENST00000376839 KCNJ4P48050 445 aa15.81■□□□□ 0.12
ACTN1-202ENST00000376839 TCEANC2Q96MN5 208 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms