RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 FAM173BQ6P4H8 233 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 PHAXQ9H814 394 aaKnown RBP19.68■□□□□ 0.74
TRIM39-201ENST00000376656 SRGAP3O43295 1099 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 VPS53Q5VIR6 699 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 CCDC186Q7Z3E2 898 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 KIF1BPQ96EK5 621 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 NCBP1Q09161 790 aaKnown RBP19.68■□□□□ 0.74
TRIM39-201ENST00000376656 MAP3K11Q16584 847 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 ME3Q16798 604 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 FERMT3Q86UX7 667 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 EYA1Q99502 592 aa19.67■□□□□ 0.74
TRIM39-201ENST00000376656 NUP62CLQ9H1M0 184 aa19.67■□□□□ 0.74
TRIM39-201ENST00000376656 NRBP1Q9UHY1 535 aa19.67■□□□□ 0.74
TRIM39-201ENST00000376656 CEP170BQ9Y4F5 1589 aaPredicted RBP19.67■□□□□ 0.74
TRIM39-201ENST00000376656 KIF20AO95235 890 aa19.67■□□□□ 0.74
TRIM39-201ENST00000376656 CKAP2LQ8IYA6 745 aa19.67■□□□□ 0.74
TRIM39-201ENST00000376656 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
TRIM39-201ENST00000376656 N4BP2Q86UW6 1770 aaPredicted RBP19.66■□□□□ 0.74
TRIM39-201ENST00000376656 C16orf45Q96MC5 204 aaPredicted RBP19.66■□□□□ 0.74
TRIM39-201ENST00000376656 ZSCAN31Q96LW9 406 aaPredicted RBP19.66■□□□□ 0.74
TRIM39-201ENST00000376656 ZSWIM6Q9HCJ5 1215 aa19.66■□□□□ 0.74
TRIM39-201ENST00000376656 SH2B1Q9NRF2 756 aaPredicted RBP19.66■□□□□ 0.74
TRIM39-201ENST00000376656 CYP46A1Q9Y6A2 500 aa19.66■□□□□ 0.74
TRIM39-201ENST00000376656 USP31Q70CQ4 1352 aa19.66■□□□□ 0.74
TRIM39-201ENST00000376656 PXDNLA1KZ92 1463 aa19.66■□□□□ 0.74
TRIM39-201ENST00000376656 KDRP35968 1356 aa19.65■□□□□ 0.74
TRIM39-201ENST00000376656 CDC37L1Q7L3B6 337 aa19.65■□□□□ 0.74
TRIM39-201ENST00000376656 CBX8Q9HC52 389 aa19.65■□□□□ 0.74
TRIM39-201ENST00000376656 NBPF7P0C2Y1 421 aaPredicted RBP19.65■□□□□ 0.74
TRIM39-201ENST00000376656 USP6P35125 1406 aa19.65■□□□□ 0.74
TRIM39-201ENST00000376656 KRT85P78386 507 aa19.64■□□□□ 0.74
TRIM39-201ENST00000376656 ANO6Q4KMQ2 910 aa19.64■□□□□ 0.74
TRIM39-201ENST00000376656 LARP1BQ659C4 914 aaKnown RBP19.64■□□□□ 0.74
TRIM39-201ENST00000376656 DRC7Q8IY82 874 aa19.64■□□□□ 0.74
TRIM39-201ENST00000376656 CACNA1FO60840 1977 aa19.64■□□□□ 0.73
TRIM39-201ENST00000376656 COL9A3Q14050 684 aaPredicted RBP19.64■□□□□ 0.73
TRIM39-201ENST00000376656 TPCN1Q9ULQ1 816 aa19.64■□□□□ 0.73
TRIM39-201ENST00000376656 FMN2Q9NZ56 1722 aa19.64■□□□□ 0.73
TRIM39-201ENST00000376656 NAA30Q147X3 362 aaPredicted RBP19.63■□□□□ 0.73
TRIM39-201ENST00000376656 SIRT1Q96EB6 747 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 DACT1Q9NYF0 836 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 TECPR2O15040 1411 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 MAP3K5Q99683 1374 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 TM6SF1Q9BZW5 370 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 TNMDQ9H2S6 317 aa19.63■□□□□ 0.73
TRIM39-201ENST00000376656 IGSF1Q8N6C5 1336 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 LRRC37A3O60309 1634 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 HDGFL1Q5TGJ6 251 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 ROBO2Q9HCK4 1378 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 GLRX3O76003 335 aaKnown RBP19.62■□□□□ 0.73
TRIM39-201ENST00000376656 ZSCAN25Q6NSZ9 544 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 FEZ1Q99689 392 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 TRIM5Q9C035 493 aa19.62■□□□□ 0.73
TRIM39-201ENST00000376656 SMTNL1A8MU46 457 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 TNNT1P13805 278 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 ZNF75DP51815 510 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 RUFY2Q8WXA3 655 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 KCNB2Q92953 911 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 TFIP11Q9UBB9 837 aaKnown RBP19.61■□□□□ 0.73
TRIM39-201ENST00000376656 FLT4P35916 1363 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 PLEKHG3A1L390 1219 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 HTATSF1O43719 755 aaKnown RBP19.61■□□□□ 0.73
TRIM39-201ENST00000376656 NECTIN1Q15223 517 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 PLA2G4DQ86XP0 818 aa19.61■□□□□ 0.73
TRIM39-201ENST00000376656 ELP1O95163 1332 aa19.6■□□□□ 0.73
TRIM39-201ENST00000376656 USP42Q9H9J4 1324 aaKnown RBP19.6■□□□□ 0.73
TRIM39-201ENST00000376656 A0A0U1RQG5 324 aaPredicted RBP19.6■□□□□ 0.73
TRIM39-201ENST00000376656 OS9Q13438 667 aaPredicted RBP19.6■□□□□ 0.73
TRIM39-201ENST00000376656 OGFRQ9NZT2 677 aa19.6■□□□□ 0.73
TRIM39-201ENST00000376656 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
TRIM39-201ENST00000376656 TTC21AQ8NDW8 1320 aa19.6■□□□□ 0.73
TRIM39-201ENST00000376656 SBNO1A3KN83 1393 aa19.6■□□□□ 0.73
TRIM39-201ENST00000376656 AMPHP49418 695 aa19.6■□□□□ 0.73
TRIM39-201ENST00000376656 TTC41PQ6P2S7 1318 aa19.6■□□□□ 0.73
TRIM39-201ENST00000376656 TCEANC2Q96MN5 208 aa19.59■□□□□ 0.73
TRIM39-201ENST00000376656 RBM8AQ9Y5S9 174 aaKnown RBP19.59■□□□□ 0.73
TRIM39-201ENST00000376656 TAF7Q15545 349 aaPredicted RBP19.58■□□□□ 0.73
TRIM39-201ENST00000376656 CREB3L3Q68CJ9 461 aa19.58■□□□□ 0.73
TRIM39-201ENST00000376656 CACTINQ8WUQ7 758 aaKnown RBP19.58■□□□□ 0.73
TRIM39-201ENST00000376656 BCL11BQ9C0K0 894 aaPredicted RBP19.58■□□□□ 0.73
TRIM39-201ENST00000376656 CCDC171Q6TFL3 1326 aa19.58■□□□□ 0.73
TRIM39-201ENST00000376656 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.72
TRIM39-201ENST00000376656 MLECQ14165 292 aa19.58■□□□□ 0.72
TRIM39-201ENST00000376656 SYCP1Q15431 976 aa19.58■□□□□ 0.72
TRIM39-201ENST00000376656 TOPAZ1Q8N9V7 1692 aa19.58■□□□□ 0.72
TRIM39-201ENST00000376656 GOLGA6L4A6NEF3 574 aa19.58■□□□□ 0.72
TRIM39-201ENST00000376656 ZKSCAN1P17029 563 aaPredicted RBP19.58■□□□□ 0.72
TRIM39-201ENST00000376656 TDRD7Q8NHU6 1098 aaKnown RBP19.58■□□□□ 0.72
TRIM39-201ENST00000376656 SPATA32Q96LK8 384 aa19.58■□□□□ 0.72
TRIM39-201ENST00000376656 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.57■□□□□ 0.72
TRIM39-201ENST00000376656 CCDC144BQ3MJ40 725 aa19.57■□□□□ 0.72
TRIM39-201ENST00000376656 CCDC144CPQ8IYA2 1237 aa19.57■□□□□ 0.72
TRIM39-201ENST00000376656 DNAJC25Q9H1X3 360 aa19.57■□□□□ 0.72
TRIM39-201ENST00000376656 CLSTN2Q9H4D0 955 aa19.57■□□□□ 0.72
TRIM39-201ENST00000376656 KCNJ4P48050 445 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 TPD52L1Q16890 204 aaPredicted RBP19.56■□□□□ 0.72
TRIM39-201ENST00000376656 NR1I2O75469 434 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms