RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 NUCB1Q02818 461 aa18.4■□□□□ 0.54
CCHCR1-201ENST00000376266 CSPP1Q1MSJ5 1256 aa18.4■□□□□ 0.54
CCHCR1-201ENST00000376266 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
CCHCR1-201ENST00000376266 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
CCHCR1-201ENST00000376266 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-201ENST00000376266 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.54
CCHCR1-201ENST00000376266 MCTP1Q6DN14 999 aa18.39■□□□□ 0.54
CCHCR1-201ENST00000376266 ZNF790Q6PG37 636 aa18.39■□□□□ 0.54
CCHCR1-201ENST00000376266 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.54
CCHCR1-201ENST00000376266 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.39■□□□□ 0.54
CCHCR1-201ENST00000376266 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
CCHCR1-201ENST00000376266 ELL2O00472 640 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-201ENST00000376266 ZSCAN23Q3MJ62 389 aa18.38■□□□□ 0.53
CCHCR1-201ENST00000376266 RBSNQ9H1K0 784 aa18.38■□□□□ 0.53
CCHCR1-201ENST00000376266 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-201ENST00000376266 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
CCHCR1-201ENST00000376266 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 PDLIM2Q96JY6 352 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 ZKSCAN5Q9Y2L8 839 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 CT47B1P0C2W7 299 aaPredicted RBP18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 AK9Q5TCS8 1911 aa18.37■□□□□ 0.53
CCHCR1-201ENST00000376266 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 TSPYL6Q8N831 410 aa18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 KDM3BQ7LBC6 1761 aa18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 SSH1Q8WYL5 1049 aa18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 TRIM37O94972 964 aa18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 TMEM57Q8N5G2 664 aa18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 PRDM10Q9NQV6 1147 aa18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 NOB1Q9ULX3 412 aaKnown RBP18.36■□□□□ 0.53
CCHCR1-201ENST00000376266 ZBTB40Q9NUA8 1239 aa18.35■□□□□ 0.53
CCHCR1-201ENST00000376266 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
CCHCR1-201ENST00000376266 SASS6Q6UVJ0 657 aa18.35■□□□□ 0.53
CCHCR1-201ENST00000376266 MCM5P33992 734 aa18.34■□□□□ 0.53
CCHCR1-201ENST00000376266 NHSQ6T4R5 1651 aa18.33■□□□□ 0.53
CCHCR1-201ENST00000376266 BCL11BQ9C0K0 894 aaPredicted RBP18.33■□□□□ 0.53
CCHCR1-201ENST00000376266 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.53
CCHCR1-201ENST00000376266 NUCB2P80303 420 aa18.33■□□□□ 0.52
CCHCR1-201ENST00000376266 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
CCHCR1-201ENST00000376266 ZHX1Q9UKY1 873 aaPredicted RBP18.33■□□□□ 0.52
CCHCR1-201ENST00000376266 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
CCHCR1-201ENST00000376266 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-201ENST00000376266 ANKRD45Q5TZF3 282 aa18.32■□□□□ 0.52
CCHCR1-201ENST00000376266 KIF16BQ96L93 1317 aa18.32■□□□□ 0.52
CCHCR1-201ENST00000376266 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
CCHCR1-201ENST00000376266 CCDC39Q9UFE4 941 aa18.32■□□□□ 0.52
CCHCR1-201ENST00000376266 PAPPAQ13219 1627 aa18.31■□□□□ 0.52
CCHCR1-201ENST00000376266 KCPQ6ZWJ8 1503 aa18.3■□□□□ 0.52
CCHCR1-201ENST00000376266 VAMP4O75379 141 aa18.3■□□□□ 0.52
CCHCR1-201ENST00000376266 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-201ENST00000376266 BTAF1O14981 1849 aa18.3■□□□□ 0.52
CCHCR1-201ENST00000376266 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
CCHCR1-201ENST00000376266 CCDC94Q9BW85 323 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-201ENST00000376266 PALLDQ8WX93 1383 aa18.29■□□□□ 0.52
CCHCR1-201ENST00000376266 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-201ENST00000376266 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-201ENST00000376266 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-201ENST00000376266 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
CCHCR1-201ENST00000376266 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
CCHCR1-201ENST00000376266 UBR2Q8IWV8 1755 aa18.28■□□□□ 0.52
CCHCR1-201ENST00000376266 SMARCC1Q92922 1105 aaPredicted RBP18.28■□□□□ 0.52
CCHCR1-201ENST00000376266 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-201ENST00000376266 EIF2S2P20042 333 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-201ENST00000376266 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 KCNQ4P56696 695 aa18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 SIK1P57059 783 aa18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 DMTNQ08495 405 aa18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 USP16Q9Y5T5 823 aa18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 RABEP1Q15276 862 aa18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 UTP14CQ5TAP6 766 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 LRSAM1Q6UWE0 723 aa18.26■□□□□ 0.51
CCHCR1-201ENST00000376266 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
CCHCR1-201ENST00000376266 CYP2E1P05181 493 aaPredicted RBP18.25■□□□□ 0.51
CCHCR1-201ENST00000376266 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-201ENST00000376266 PKP1Q13835 747 aa18.25■□□□□ 0.51
CCHCR1-201ENST00000376266 GCC1Q96CN9 775 aa18.25■□□□□ 0.51
CCHCR1-201ENST00000376266 SYCE3A1L190 88 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 CDC45O75419 566 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 APBA3O96018 575 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 ATP6V1AP38606 617 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 DNTTIP2Q5QJE6 756 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 HDGFL1Q5TGJ6 251 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 HOXB7P09629 217 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 C5P01031 1676 aa18.24■□□□□ 0.51
CCHCR1-201ENST00000376266 KIAA2012Q0VF49 1180 aa18.22■□□□□ 0.51
CCHCR1-201ENST00000376266 ITPK1Q13572 414 aa18.22■□□□□ 0.51
CCHCR1-201ENST00000376266 RNF214Q8ND24 703 aa18.22■□□□□ 0.51
CCHCR1-201ENST00000376266 CWC22Q9HCG8 908 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-201ENST00000376266 TMEM63CQ9P1W3 806 aa18.22■□□□□ 0.51
CCHCR1-201ENST00000376266 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-201ENST00000376266 ZSCAN20P17040 1043 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-201ENST00000376266 PIP4K2AP48426 406 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-201ENST00000376266 CCDC30Q5VVM6 783 aa18.21■□□□□ 0.51
CCHCR1-201ENST00000376266 MYRIPQ8NFW9 859 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms