RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 SIK1P57059 783 aa13.26□□□□□ -0.29
PDPN-203ENST00000376061 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
PDPN-203ENST00000376061 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
PDPN-203ENST00000376061 ATP10DQ9P241 1426 aa13.26□□□□□ -0.29
PDPN-203ENST00000376061 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
PDPN-203ENST00000376061 FAM196AQ6ZSG2 479 aa13.25□□□□□ -0.29
PDPN-203ENST00000376061 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
PDPN-203ENST00000376061 STARD3NLO95772 234 aa13.24□□□□□ -0.29
PDPN-203ENST00000376061 CCT4P50991 539 aaKnown RBP13.24□□□□□ -0.29
PDPN-203ENST00000376061 AAMPQ13685 434 aa13.24□□□□□ -0.29
PDPN-203ENST00000376061 ANKRD36CQ5JPF3 1778 aa13.24□□□□□ -0.29
PDPN-203ENST00000376061 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
PDPN-203ENST00000376061 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
PDPN-203ENST00000376061 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
PDPN-203ENST00000376061 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
PDPN-203ENST00000376061 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
PDPN-203ENST00000376061 ITPK1Q13572 414 aa13.23□□□□□ -0.29
PDPN-203ENST00000376061 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
PDPN-203ENST00000376061 DNAAF4Q8WXU2 420 aa13.23□□□□□ -0.29
PDPN-203ENST00000376061 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
PDPN-203ENST00000376061 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
PDPN-203ENST00000376061 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
PDPN-203ENST00000376061 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
PDPN-203ENST00000376061 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
PDPN-203ENST00000376061 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
PDPN-203ENST00000376061 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
PDPN-203ENST00000376061 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
PDPN-203ENST00000376061 RGPD4Q7Z3J3 1758 aa13.22□□□□□ -0.29
PDPN-203ENST00000376061 C4BP0C0L5 1744 aa13.21□□□□□ -0.29
PDPN-203ENST00000376061 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.29
PDPN-203ENST00000376061 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
PDPN-203ENST00000376061 SCN7AQ01118 1682 aa13.21□□□□□ -0.3
PDPN-203ENST00000376061 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
PDPN-203ENST00000376061 PCDHB15Q9Y5E8 787 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 NUP98P52948 1817 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 TRIM37O94972 964 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 CRKLP46109 303 aaKnown RBP13.2□□□□□ -0.3
PDPN-203ENST00000376061 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
PDPN-203ENST00000376061 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
PDPN-203ENST00000376061 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 MEIS3Q99687 375 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 CCDC87Q9NVE4 849 aa13.2□□□□□ -0.3
PDPN-203ENST00000376061 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
PDPN-203ENST00000376061 IBTKQ9P2D0 1353 aaPredicted RBP13.19□□□□□ -0.3
PDPN-203ENST00000376061 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
PDPN-203ENST00000376061 PLBD2Q8NHP8 589 aa13.19□□□□□ -0.3
PDPN-203ENST00000376061 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
PDPN-203ENST00000376061 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
PDPN-203ENST00000376061 KDM2BQ8NHM5 1336 aa13.18□□□□□ -0.3
PDPN-203ENST00000376061 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
PDPN-203ENST00000376061 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
PDPN-203ENST00000376061 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
PDPN-203ENST00000376061 KCNQ4P56696 695 aa13.18□□□□□ -0.3
PDPN-203ENST00000376061 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
PDPN-203ENST00000376061 METTL22Q9BUU2 404 aaPredicted RBP13.18□□□□□ -0.3
PDPN-203ENST00000376061 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
PDPN-203ENST00000376061 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
PDPN-203ENST00000376061 ALDH1L1O75891 902 aa13.17□□□□□ -0.3
PDPN-203ENST00000376061 IGKV5-2P06315 115 aa13.16□□□□□ -0.3
PDPN-203ENST00000376061 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
PDPN-203ENST00000376061 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
PDPN-203ENST00000376061 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
PDPN-203ENST00000376061 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
PDPN-203ENST00000376061 MYD88Q99836 296 aa13.16□□□□□ -0.3
PDPN-203ENST00000376061 USP44Q9H0E7 712 aa13.16□□□□□ -0.3
PDPN-203ENST00000376061 ZBTB3Q9H5J0 574 aa13.16□□□□□ -0.3
PDPN-203ENST00000376061 COL15A1P39059 1388 aa13.16□□□□□ -0.3
PDPN-203ENST00000376061 MAP3K15Q6ZN16 1313 aa13.15□□□□□ -0.3
PDPN-203ENST00000376061 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
PDPN-203ENST00000376061 GNAI3P08754 354 aa13.15□□□□□ -0.3
PDPN-203ENST00000376061 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
PDPN-203ENST00000376061 CENPQQ7L2Z9 268 aaPredicted RBP13.15□□□□□ -0.3
PDPN-203ENST00000376061 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
PDPN-203ENST00000376061 IGHDP01880 384 aa13.14□□□□□ -0.31
PDPN-203ENST00000376061 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
PDPN-203ENST00000376061 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
PDPN-203ENST00000376061 GNAI2P04899 355 aa13.13□□□□□ -0.31
PDPN-203ENST00000376061 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
PDPN-203ENST00000376061 HDAC1Q13547 482 aaPredicted RBP13.13□□□□□ -0.31
PDPN-203ENST00000376061 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
PDPN-203ENST00000376061 UTYO14607 1347 aa13.13□□□□□ -0.31
PDPN-203ENST00000376061 ATP5J2-PTCD1G3V325 749 aa13.12□□□□□ -0.31
PDPN-203ENST00000376061 GRM8O00222 908 aa13.12□□□□□ -0.31
PDPN-203ENST00000376061 NBPF7P0C2Y1 421 aaPredicted RBP13.12□□□□□ -0.31
PDPN-203ENST00000376061 GCKRQ14397 625 aa13.12□□□□□ -0.31
PDPN-203ENST00000376061 SLC27A3Q5K4L6 730 aa13.12□□□□□ -0.31
PDPN-203ENST00000376061 CEP85Q6P2H3 762 aa13.12□□□□□ -0.31
PDPN-203ENST00000376061 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
PDPN-203ENST00000376061 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
PDPN-203ENST00000376061 COL24A1Q17RW2 1714 aa13.12□□□□□ -0.31
PDPN-203ENST00000376061 LAMB2P55268 1798 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 ZBTB22O15209 634 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 GNPATO15228 680 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 HLFQ16534 295 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 GIGYF2Q6Y7W6 1299 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms