RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 GLRX3O76003 335 aaKnown RBP14.94□□□□□ -0.02
TNFSF13B-201ENST00000375887 TPM2P07951 284 aa14.94□□□□□ -0.02
TNFSF13B-201ENST00000375887 ZSCAN22P10073 491 aaPredicted RBP14.94□□□□□ -0.02
TNFSF13B-201ENST00000375887 MTX1Q13505 466 aa14.94□□□□□ -0.02
TNFSF13B-201ENST00000375887 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
TNFSF13B-201ENST00000375887 STX6O43752 255 aa14.93□□□□□ -0.02
TNFSF13B-201ENST00000375887 AKAP4Q5JQC9 854 aa14.93□□□□□ -0.02
TNFSF13B-201ENST00000375887 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.93□□□□□ -0.02
TNFSF13B-201ENST00000375887 TMEM87AQ8NBN3 555 aa14.93□□□□□ -0.02
TNFSF13B-201ENST00000375887 DBF4Q9UBU7 674 aaPredicted RBP14.93□□□□□ -0.02
TNFSF13B-201ENST00000375887 R3HCC1Q9Y3T6 440 aaKnown RBP14.93□□□□□ -0.02
TNFSF13B-201ENST00000375887 TTC41PQ6P2S7 1318 aa14.93□□□□□ -0.02
TNFSF13B-201ENST00000375887 LTN1O94822 1766 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 GIGYF1O75420 1035 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 PRPF40BQ6NWY9 871 aaKnown RBP14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 CLASRPQ8N2M8 674 aaKnown RBP14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 KAZALD1Q96I82 304 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 DIAPH3Q9NSV4 1193 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 C9orf78Q9NZ63 289 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 NFAT5O94916 1531 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 RNMTO43148 476 aaKnown RBP14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 PSME1Q06323 249 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 ST3GAL1Q11201 340 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 ESCO1Q5FWF5 840 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 SYAP1Q96A49 352 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 ECHDC1Q9NTX5 307 aa14.92□□□□□ -0.02
TNFSF13B-201ENST00000375887 USP54Q70EL1 1684 aa14.91□□□□□ -0.02
TNFSF13B-201ENST00000375887 CCDC83Q8IWF9 413 aa14.91□□□□□ -0.02
TNFSF13B-201ENST00000375887 JAKMIP1Q96N16 626 aaKnown RBP14.91□□□□□ -0.02
TNFSF13B-201ENST00000375887 RGPD2P0DJD1 1756 aa14.91□□□□□ -0.02
TNFSF13B-201ENST00000375887 AIMP1Q12904 312 aaKnown RBP14.91□□□□□ -0.02
TNFSF13B-201ENST00000375887 SMC3Q9UQE7 1217 aa14.91□□□□□ -0.02
TNFSF13B-201ENST00000375887 PXDNQ92626 1479 aa14.91□□□□□ -0.02
TNFSF13B-201ENST00000375887 F13A1P00488 732 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 KSR2Q6VAB6 950 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 FAM227BQ96M60 508 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 CCDC39Q9UFE4 941 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 KDM3BQ7LBC6 1761 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 FIBPO43427 364 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 SASH1O94885 1247 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 AACSQ86V21 672 aa14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 JARID2Q92833 1246 aaPredicted RBP14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.9□□□□□ -0.02
TNFSF13B-201ENST00000375887 GJB2P29033 226 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 NECTIN1Q15223 517 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 EAF2Q96CJ1 260 aaPredicted RBP14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 SUCLG2Q96I99 432 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 ZSWIM6Q9HCJ5 1215 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 PDRG1Q9NUG6 133 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 IFIT2P09913 472 aaKnown RBP14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 ME3Q16798 604 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 NECAB1Q8N987 351 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 KCNB2Q92953 911 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 CRYBG1Q9Y4K1 1723 aa14.89□□□□□ -0.03
TNFSF13B-201ENST00000375887 ALDH1L1O75891 902 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 PIP4K2AP48426 406 aaPredicted RBP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 DNM1Q05193 864 aaKnown RBP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 CCDC183Q5T5S1 534 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 VPS53Q5VIR6 699 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 CCDC8Q9H0W5 538 aaPredicted RBP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 TLR7Q9NYK1 1049 aaKnown RBP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 HEG1Q9ULI3 1381 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 PHF14O94880 888 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 GCP02774 474 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 HCLS1P14317 486 aaPredicted RBP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 MCM5P33992 734 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 UBE2HP62256 183 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 KLHDC4Q8TBB5 520 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 ZNF830Q96NB3 372 aaPredicted RBP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 BICC1Q9H694 974 aaKnown RBP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 USP25Q9UHP3 1055 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 AXIN2Q9Y2T1 843 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 TAF6LQ9Y6J9 622 aa14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.88□□□□□ -0.03
TNFSF13B-201ENST00000375887 ARHGEF25Q86VW2 580 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 SIL1Q9H173 461 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 RBM10P98175 930 aaKnown RBP14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 C1orf141Q5JVX7 400 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 ORAI2Q96SN7 254 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 RBM8AQ9Y5S9 174 aaKnown RBP14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 CYP46A1Q9Y6A2 500 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 CCDC171Q6TFL3 1326 aa14.87□□□□□ -0.03
TNFSF13B-201ENST00000375887 GRM8O00222 908 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 PTMAP06454 111 aaKnown RBP14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 TERF1P54274 439 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 NMIQ13287 307 aaPredicted RBP14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 PDIA6Q15084 440 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 AMOTQ4VCS5 1084 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 TCEANC2Q96MN5 208 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 CHMP4AQ9BY43 222 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 TPCN1Q9ULQ1 816 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 CREB3L3Q68CJ9 461 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
TNFSF13B-201ENST00000375887 TM6SF1Q9BZW5 370 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms