RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
LSM2-208ENST00000375661 CNBD1Q8NA66 436 aa16.23■□□□□ 0.19
LSM2-208ENST00000375661 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
LSM2-208ENST00000375661 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
LSM2-208ENST00000375661 ZNF330Q9Y3S2 320 aaPredicted RBP16.22■□□□□ 0.19
LSM2-208ENST00000375661 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
LSM2-208ENST00000375661 NPHP1O15259 732 aa16.21■□□□□ 0.19
LSM2-208ENST00000375661 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
LSM2-208ENST00000375661 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
LSM2-208ENST00000375661 IQCA1LA6NCM1 817 aa16.2■□□□□ 0.18
LSM2-208ENST00000375661 RGL2O15211 777 aa16.2■□□□□ 0.18
LSM2-208ENST00000375661 A1BGP04217 495 aa16.2■□□□□ 0.18
LSM2-208ENST00000375661 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
LSM2-208ENST00000375661 DZIP3Q86Y13 1208 aaKnown RBP16.2■□□□□ 0.18
LSM2-208ENST00000375661 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
LSM2-208ENST00000375661 CAPN15O75808 1086 aa16.19■□□□□ 0.18
LSM2-208ENST00000375661 DDNO94850 711 aaPredicted RBP16.19■□□□□ 0.18
LSM2-208ENST00000375661 RALBP1Q15311 655 aa16.19■□□□□ 0.18
LSM2-208ENST00000375661 PCNTO95613 3336 aa16.19■□□□□ 0.18
LSM2-208ENST00000375661 BTBD11A6QL63 1104 aa16.18■□□□□ 0.18
LSM2-208ENST00000375661 CCDC24Q8N4L8 307 aa16.18■□□□□ 0.18
LSM2-208ENST00000375661 L3MBTL3Q96JM7 780 aaPredicted RBP16.18■□□□□ 0.18
LSM2-208ENST00000375661 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
LSM2-208ENST00000375661 ZNF652Q9Y2D9 606 aa16.18■□□□□ 0.18
LSM2-208ENST00000375661 CCDC93Q567U6 631 aa16.17■□□□□ 0.18
LSM2-208ENST00000375661 LDHDQ86WU2 507 aa16.17■□□□□ 0.18
LSM2-208ENST00000375661 PASKQ96RG2 1323 aa16.17■□□□□ 0.18
LSM2-208ENST00000375661 CNTNAP1P78357 1384 aa16.16■□□□□ 0.18
LSM2-208ENST00000375661 NPR1P16066 1061 aa16.16■□□□□ 0.18
LSM2-208ENST00000375661 NBPF5PQ86XG9 351 aaPredicted RBP16.16■□□□□ 0.18
LSM2-208ENST00000375661 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
LSM2-208ENST00000375661 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
LSM2-208ENST00000375661 ADAMTSL1Q8N6G6 1762 aa16.15■□□□□ 0.18
LSM2-208ENST00000375661 KLRG2A4D1S0 409 aaPredicted RBP16.15■□□□□ 0.18
LSM2-208ENST00000375661 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
LSM2-208ENST00000375661 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
LSM2-208ENST00000375661 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
LSM2-208ENST00000375661 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
LSM2-208ENST00000375661 KCNQ3O43525 872 aa16.14■□□□□ 0.17
LSM2-208ENST00000375661 SNRPA1P09661 255 aaKnown RBP16.14■□□□□ 0.17
LSM2-208ENST00000375661 POTEIP0CG38 1075 aa16.14■□□□□ 0.17
LSM2-208ENST00000375661 POTEJP0CG39 1038 aa16.14■□□□□ 0.17
LSM2-208ENST00000375661 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
LSM2-208ENST00000375661 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.17
LSM2-208ENST00000375661 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
LSM2-208ENST00000375661 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
LSM2-208ENST00000375661 RTKN2Q8IZC4 609 aa16.13■□□□□ 0.17
LSM2-208ENST00000375661 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
LSM2-208ENST00000375661 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
LSM2-208ENST00000375661 RTF1Q92541 710 aaKnown RBP16.12■□□□□ 0.17
LSM2-208ENST00000375661 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
LSM2-208ENST00000375661 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
LSM2-208ENST00000375661 NUP98P52948 1817 aa16.12■□□□□ 0.17
LSM2-208ENST00000375661 TMEM88BA6NKF7 163 aa16.11■□□□□ 0.17
LSM2-208ENST00000375661 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
LSM2-208ENST00000375661 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
LSM2-208ENST00000375661 HACL1Q9UJ83 578 aa16.11■□□□□ 0.17
LSM2-208ENST00000375661 NIP7Q9Y221 180 aaKnown RBP eCLIP16.11■□□□□ 0.17
LSM2-208ENST00000375661 ANP32CO43423 234 aa16.1■□□□□ 0.17
LSM2-208ENST00000375661 ITGBL1O95965 494 aaPredicted RBP16.1■□□□□ 0.17
LSM2-208ENST00000375661 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
LSM2-208ENST00000375661 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 FZD9O00144 591 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 FOXN1O15353 648 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 PIP4K2AP48426 406 aaPredicted RBP16.09■□□□□ 0.17
LSM2-208ENST00000375661 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
LSM2-208ENST00000375661 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 AIDAQ96BJ3 306 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
LSM2-208ENST00000375661 ZNF541Q9H0D2 1346 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
LSM2-208ENST00000375661 EPHX2P34913 555 aa16.08■□□□□ 0.16
LSM2-208ENST00000375661 IARSP41252 1262 aaKnown RBP16.08■□□□□ 0.16
LSM2-208ENST00000375661 CTCFP49711 727 aaPredicted RBP16.08■□□□□ 0.16
LSM2-208ENST00000375661 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
LSM2-208ENST00000375661 VEGFBP49765 207 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 GRIPAP1Q4V328 841 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 EAPPQ56P03 285 aaPredicted RBP16.07■□□□□ 0.16
LSM2-208ENST00000375661 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 MCM10Q7L590 875 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 GPC2Q8N158 579 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 PSMD1Q99460 953 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 NYXQ9GZU5 481 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
LSM2-208ENST00000375661 TRPM7Q96QT4 1865 aa16.06■□□□□ 0.16
LSM2-208ENST00000375661 RIC1Q4ADV7 1423 aa16.06■□□□□ 0.16
LSM2-208ENST00000375661 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
LSM2-208ENST00000375661 GTF2E1P29083 439 aaPredicted RBP16.06■□□□□ 0.16
LSM2-208ENST00000375661 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.16
LSM2-208ENST00000375661 CRY2Q49AN0 593 aa16.06■□□□□ 0.16
LSM2-208ENST00000375661 SYNE4Q8N205 404 aa16.06■□□□□ 0.16
LSM2-208ENST00000375661 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
LSM2-208ENST00000375661 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
LSM2-208ENST00000375661 IBTKQ9P2D0 1353 aaPredicted RBP16.05■□□□□ 0.16
LSM2-208ENST00000375661 RASSF10A6NK89 507 aa16.05■□□□□ 0.16
LSM2-208ENST00000375661 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
LSM2-208ENST00000375661 TAF7Q15545 349 aaPredicted RBP16.05■□□□□ 0.16
LSM2-208ENST00000375661 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
LSM2-208ENST00000375661 WBP1LQ9NX94 342 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms