RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NFAT5O94916 1531 aa14.6□□□□□ -0.07
C9orf3-203ENST00000375315 DLG5Q8TDM6 1919 aa14.6□□□□□ -0.07
C9orf3-203ENST00000375315 STK31Q9BXU1 1019 aa14.59□□□□□ -0.07
C9orf3-203ENST00000375315 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
C9orf3-203ENST00000375315 NSFL1CQ9UNZ2 370 aaKnown RBP14.59□□□□□ -0.07
C9orf3-203ENST00000375315 SOS2Q07890 1332 aaPredicted RBP14.59□□□□□ -0.07
C9orf3-203ENST00000375315 ST18O60284 1047 aa14.59□□□□□ -0.07
C9orf3-203ENST00000375315 MED1Q15648 1581 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-203ENST00000375315 SLFN14P0C7P3 912 aa14.58□□□□□ -0.08
C9orf3-203ENST00000375315 HDGFL1Q5TGJ6 251 aa14.58□□□□□ -0.08
C9orf3-203ENST00000375315 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
C9orf3-203ENST00000375315 RNMTO43148 476 aaKnown RBP14.58□□□□□ -0.08
C9orf3-203ENST00000375315 AIMP1Q12904 312 aaKnown RBP14.58□□□□□ -0.08
C9orf3-203ENST00000375315 ANKRD45Q5TZF3 282 aa14.58□□□□□ -0.08
C9orf3-203ENST00000375315 CALCOCO1Q9P1Z2 691 aa14.58□□□□□ -0.08
C9orf3-203ENST00000375315 USP25Q9UHP3 1055 aa14.58□□□□□ -0.08
C9orf3-203ENST00000375315 RGPD2P0DJD1 1756 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 AKAP4Q5JQC9 854 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 DCCP43146 1447 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 ADCY5O95622 1261 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 SYCP1Q15431 976 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 TSPYL1Q9H0U9 437 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 PHAXQ9H814 394 aaKnown RBP14.57□□□□□ -0.08
C9orf3-203ENST00000375315 TPM3P06753 285 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 IRX3P78415 501 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-203ENST00000375315 CRB1P82279 1406 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 ALDH1L2Q3SY69 923 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 SYTL4Q96C24 671 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-203ENST00000375315 ZDHHC9Q9Y397 364 aa14.57□□□□□ -0.08
C9orf3-203ENST00000375315 MARF1Q9Y4F3 1742 aaKnown RBP14.56□□□□□ -0.08
C9orf3-203ENST00000375315 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
C9orf3-203ENST00000375315 GCC1Q96CN9 775 aa14.56□□□□□ -0.08
C9orf3-203ENST00000375315 CTNNA3Q9UI47 895 aa14.56□□□□□ -0.08
C9orf3-203ENST00000375315 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
C9orf3-203ENST00000375315 AMOTQ4VCS5 1084 aa14.56□□□□□ -0.08
C9orf3-203ENST00000375315 PXDNQ92626 1479 aa14.56□□□□□ -0.08
C9orf3-203ENST00000375315 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
C9orf3-203ENST00000375315 DDX41Q9UJV9 622 aaKnown RBP14.55□□□□□ -0.08
C9orf3-203ENST00000375315 KIF24Q5T7B8 1368 aa14.55□□□□□ -0.08
C9orf3-203ENST00000375315 CYP27B1O15528 508 aa14.55□□□□□ -0.08
C9orf3-203ENST00000375315 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
C9orf3-203ENST00000375315 TERF2Q15554 542 aa14.55□□□□□ -0.08
C9orf3-203ENST00000375315 KIAA1524Q8TCG1 905 aa14.55□□□□□ -0.08
C9orf3-203ENST00000375315 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
C9orf3-203ENST00000375315 MYL6BP14649 208 aa14.54□□□□□ -0.08
C9orf3-203ENST00000375315 XIRP1Q702N8 1843 aaKnown RBP14.54□□□□□ -0.08
C9orf3-203ENST00000375315 RGPD5Q99666 1765 aa14.54□□□□□ -0.08
C9orf3-203ENST00000375315 NCBP1Q09161 790 aaKnown RBP14.54□□□□□ -0.08
C9orf3-203ENST00000375315 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-203ENST00000375315 CHPF2Q9P2E5 772 aa14.54□□□□□ -0.08
C9orf3-203ENST00000375315 MORC2Q9Y6X9 1032 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-203ENST00000375315 KRT222Q8N1A0 295 aa14.52□□□□□ -0.08
C9orf3-203ENST00000375315 PHKG2P15735 406 aa14.52□□□□□ -0.08
C9orf3-203ENST00000375315 CABP4P57796 275 aa14.52□□□□□ -0.08
C9orf3-203ENST00000375315 IFNL2Q8IZJ0 200 aa14.52□□□□□ -0.08
C9orf3-203ENST00000375315 FAM193AP78312 1265 aa14.52□□□□□ -0.09
C9orf3-203ENST00000375315 FOXD4L5Q5VV16 416 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-203ENST00000375315 CCDC30Q5VVM6 783 aa14.52□□□□□ -0.09
C9orf3-203ENST00000375315 FOXD4L4Q8WXT5 416 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-203ENST00000375315 API5Q9BZZ5 524 aaKnown RBP14.52□□□□□ -0.09
C9orf3-203ENST00000375315 GOLGA6L6A8MZA4 724 aa14.51□□□□□ -0.09
C9orf3-203ENST00000375315 TOM1O60784 492 aa14.51□□□□□ -0.09
C9orf3-203ENST00000375315 FLIIQ13045 1269 aa14.51□□□□□ -0.09
C9orf3-203ENST00000375315 ZCRB1Q8TBF4 217 aaKnown RBP14.51□□□□□ -0.09
C9orf3-203ENST00000375315 CHAMP1Q96JM3 812 aa14.51□□□□□ -0.09
C9orf3-203ENST00000375315 MEIS3Q99687 375 aa14.51□□□□□ -0.09
C9orf3-203ENST00000375315 TULP2O00295 520 aa14.51□□□□□ -0.09
C9orf3-203ENST00000375315 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
C9orf3-203ENST00000375315 CREBRFQ8IUR6 639 aa14.51□□□□□ -0.09
C9orf3-203ENST00000375315 TRPM3Q9HCF6 1732 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-203ENST00000375315 HTATSF1O43719 755 aaKnown RBP14.5□□□□□ -0.09
C9orf3-203ENST00000375315 PROSER3Q2NL68 480 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 MEGF6O75095 1541 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 KIF1AQ12756 1690 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 TTC5Q8N0Z6 440 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 USP26Q9BXU7 913 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 CHMP4AQ9BY43 222 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 WDR17Q8IZU2 1322 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 TEX2Q8IWB9 1127 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
C9orf3-203ENST00000375315 RGPD1P0DJD0 1748 aa14.49□□□□□ -0.09
C9orf3-203ENST00000375315 KDM4AO75164 1064 aa14.49□□□□□ -0.09
C9orf3-203ENST00000375315 SLIT3O75094 1523 aa14.49□□□□□ -0.09
C9orf3-203ENST00000375315 SMTNL1A8MU46 457 aa14.49□□□□□ -0.09
C9orf3-203ENST00000375315 ZBTB7BO15156 539 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-203ENST00000375315 IL2RBP14784 551 aa14.49□□□□□ -0.09
C9orf3-203ENST00000375315 KIF18AQ8NI77 898 aa14.49□□□□□ -0.09
C9orf3-203ENST00000375315 PYCARDQ9ULZ3 195 aa14.49□□□□□ -0.09
C9orf3-203ENST00000375315 TRIM6-TRIM34B2RNG4 842 aa14.48□□□□□ -0.09
C9orf3-203ENST00000375315 PLCB2Q00722 1185 aa14.48□□□□□ -0.09
C9orf3-203ENST00000375315 INTS3Q68E01 1043 aaKnown RBP14.48□□□□□ -0.09
C9orf3-203ENST00000375315 ZNF496Q96IT1 587 aaPredicted RBP14.48□□□□□ -0.09
C9orf3-203ENST00000375315 TRIM34Q9BYJ4 488 aa14.48□□□□□ -0.09
C9orf3-203ENST00000375315 BRD1O95696 1058 aa14.48□□□□□ -0.09
C9orf3-203ENST00000375315 CAMTA1Q9Y6Y1 1673 aa14.48□□□□□ -0.09
C9orf3-203ENST00000375315 CCDC183Q5T5S1 534 aa14.48□□□□□ -0.09
C9orf3-203ENST00000375315 CASC1Q6TDU7 716 aa14.48□□□□□ -0.09
C9orf3-203ENST00000375315 ERICH4A6NGS2 130 aa14.47□□□□□ -0.09
C9orf3-203ENST00000375315 PI4KAP2A4QPH2 592 aa14.47□□□□□ -0.09
C9orf3-203ENST00000375315 CAPN2P17655 700 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms