RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 CDK12Q9NYV4 1490 aaPredicted RBP16.17■□□□□ 0.18
CLIC4-201ENST00000374379 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
CLIC4-201ENST00000374379 BICDL1Q6ZP65 573 aa16.17■□□□□ 0.18
CLIC4-201ENST00000374379 IDH1O75874 414 aaKnown RBP16.17■□□□□ 0.18
CLIC4-201ENST00000374379 BCL11BQ9C0K0 894 aaPredicted RBP16.16■□□□□ 0.18
CLIC4-201ENST00000374379 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLIC4-201ENST00000374379 CLTCQ00610 1675 aaKnown RBP16.16■□□□□ 0.18
CLIC4-201ENST00000374379 IFIT1P09914 478 aaKnown RBP16.16■□□□□ 0.18
CLIC4-201ENST00000374379 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
CLIC4-201ENST00000374379 EVI5LQ96CN4 794 aa16.16■□□□□ 0.18
CLIC4-201ENST00000374379 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
CLIC4-201ENST00000374379 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 ATP2B1P20020 1258 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 METTL24Q5JXM2 366 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 BECN2A8MW95 431 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 ALDH1L1O75891 902 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 FAM43AQ8N2R8 423 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 GUCY1B3Q02153 619 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 RAB3GAP1Q15042 981 aa16.15■□□□□ 0.18
CLIC4-201ENST00000374379 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
CLIC4-201ENST00000374379 PKP1Q13835 747 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 RAB11FIP4Q86YS3 637 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 MTMR7Q9Y216 660 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 DEPDC5O75140 1603 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 CPS1P31327 1500 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 STARD3NLO95772 234 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
CLIC4-201ENST00000374379 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 TFIP11Q9UBB9 837 aaKnown RBP16.14■□□□□ 0.17
CLIC4-201ENST00000374379 GIGYF1O75420 1035 aaPredicted RBP16.14■□□□□ 0.17
CLIC4-201ENST00000374379 A1BGP04217 495 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 HAND2P61296 217 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
CLIC4-201ENST00000374379 BRPF1P55201 1214 aaPredicted RBP16.13■□□□□ 0.17
CLIC4-201ENST00000374379 PALD1Q9ULE6 856 aa16.13■□□□□ 0.17
CLIC4-201ENST00000374379 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
CLIC4-201ENST00000374379 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
CLIC4-201ENST00000374379 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
CLIC4-201ENST00000374379 CHAF1AQ13111 956 aaPredicted RBP16.13■□□□□ 0.17
CLIC4-201ENST00000374379 CAMK4Q16566 473 aa16.13■□□□□ 0.17
CLIC4-201ENST00000374379 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
CLIC4-201ENST00000374379 PDCP20941 246 aa16.13■□□□□ 0.17
CLIC4-201ENST00000374379 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
CLIC4-201ENST00000374379 CPLX2Q6PUV4 134 aaKnown RBP16.13■□□□□ 0.17
CLIC4-201ENST00000374379 CCT2P78371 535 aaKnown RBP16.12■□□□□ 0.17
CLIC4-201ENST00000374379 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
CLIC4-201ENST00000374379 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
CLIC4-201ENST00000374379 GJB2P29033 226 aa16.12■□□□□ 0.17
CLIC4-201ENST00000374379 GLIPR1L2Q4G1C9 344 aa16.12■□□□□ 0.17
CLIC4-201ENST00000374379 SYNE3Q6ZMZ3 975 aa16.12■□□□□ 0.17
CLIC4-201ENST00000374379 TFCP2Q12800 502 aa16.12■□□□□ 0.17
CLIC4-201ENST00000374379 GOLGA6L6A8MZA4 724 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 ARHGEF25Q86VW2 580 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 SPC24Q8NBT2 197 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 TIMM10P62072 90 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
CLIC4-201ENST00000374379 FAM227BQ96M60 508 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 AK2P54819 239 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 ACSBG1Q96GR2 724 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
CLIC4-201ENST00000374379 KRT85P78386 507 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 KIAA1210Q9ULL0 1709 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 ESPNB1AK53 854 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 SLC52A2Q9HAB3 445 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 MYO3AQ8NEV4 1616 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 LDHAL6AQ6ZMR3 332 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 SDF4Q9BRK5 362 aa16.1■□□□□ 0.17
CLIC4-201ENST00000374379 STX6O43752 255 aa16.09■□□□□ 0.17
CLIC4-201ENST00000374379 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
CLIC4-201ENST00000374379 CCDC73Q6ZRK6 1079 aa16.09■□□□□ 0.17
CLIC4-201ENST00000374379 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
CLIC4-201ENST00000374379 ANKRD1Q15327 319 aa16.09■□□□□ 0.17
CLIC4-201ENST00000374379 ZC3H13Q5T200 1668 aaKnown RBP16.09■□□□□ 0.17
CLIC4-201ENST00000374379 ZSCAN31Q96LW9 406 aaPredicted RBP16.09■□□□□ 0.17
CLIC4-201ENST00000374379 ABCF2Q9UG63 623 aa16.09■□□□□ 0.17
CLIC4-201ENST00000374379 RIMBP3CA6NJZ7 1639 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 RIMBP3BA6NNM3 1639 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 RIMBP3Q9UFD9 1639 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 TRIM29Q14134 588 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 KLHL40Q2TBA0 621 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 CHST3Q7LGC8 479 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 IQSEC2Q5JU85 1478 aa16.08■□□□□ 0.17
CLIC4-201ENST00000374379 EXOC5O00471 708 aa16.08■□□□□ 0.16
CLIC4-201ENST00000374379 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
CLIC4-201ENST00000374379 R3HCC1Q9Y3T6 440 aaKnown RBP16.08■□□□□ 0.16
CLIC4-201ENST00000374379 SSH3Q8TE77 659 aa16.08■□□□□ 0.16
CLIC4-201ENST00000374379 SPATA32Q96LK8 384 aa16.08■□□□□ 0.16
CLIC4-201ENST00000374379 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
CLIC4-201ENST00000374379 CCDC173Q0VFZ6 552 aa16.08■□□□□ 0.16
CLIC4-201ENST00000374379 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
CLIC4-201ENST00000374379 IL2RBP14784 551 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 DBNDD2Q9BQY9 259 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms