RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 GNPATO15228 680 aa18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 PPP4R2Q9NY27 417 aa18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 MAP3K2Q9Y2U5 619 aa18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 NUP188Q5SRE5 1749 aa18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 N4BP2Q86UW6 1770 aaPredicted RBP18.56■□□□□ 0.56
SMPDL3B-201ENST00000373888 EZH2Q15910 746 aaKnown RBP18.55■□□□□ 0.56
SMPDL3B-201ENST00000373888 KIF6Q6ZMV9 814 aa18.55■□□□□ 0.56
SMPDL3B-201ENST00000373888 RIC3Q7Z5B4 369 aa18.55■□□□□ 0.56
SMPDL3B-201ENST00000373888 AK7Q96M32 723 aa18.55■□□□□ 0.56
SMPDL3B-201ENST00000373888 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
SMPDL3B-201ENST00000373888 A0A087WZG4 1122 aa18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 MVPQ14764 893 aaKnown RBP18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 RTCBQ9Y3I0 505 aaKnown RBP18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 MAP3K15Q6ZN16 1313 aa18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 SLC4A10Q6U841 1118 aa18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 DZIP3Q86Y13 1208 aaKnown RBP18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 CRBNQ96SW2 442 aa18.54■□□□□ 0.56
SMPDL3B-201ENST00000373888 UBR3Q6ZT12 1888 aa18.53■□□□□ 0.56
SMPDL3B-201ENST00000373888 ERVV-1B6SEH8 477 aa18.53■□□□□ 0.56
SMPDL3B-201ENST00000373888 BEND3Q5T5X7 828 aa18.53■□□□□ 0.56
SMPDL3B-201ENST00000373888 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
SMPDL3B-201ENST00000373888 ITPRIPQ8IWB1 547 aa18.53■□□□□ 0.56
SMPDL3B-201ENST00000373888 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
SMPDL3B-201ENST00000373888 METTL22Q9BUU2 404 aaPredicted RBP18.53■□□□□ 0.56
SMPDL3B-201ENST00000373888 ADRA2BP18089 450 aa18.52■□□□□ 0.56
SMPDL3B-201ENST00000373888 AMIGO3Q86WK7 504 aa18.52■□□□□ 0.56
SMPDL3B-201ENST00000373888 ZBTB3Q9H5J0 574 aa18.52■□□□□ 0.56
SMPDL3B-201ENST00000373888 DDX19BQ9UMR2 479 aa18.52■□□□□ 0.56
SMPDL3B-201ENST00000373888 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
SMPDL3B-201ENST00000373888 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
SMPDL3B-201ENST00000373888 UPF1Q92900 1129 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMPDL3B-201ENST00000373888 TBC1D2BQ9UPU7 963 aa18.51■□□□□ 0.55
SMPDL3B-201ENST00000373888 BCORQ6W2J9 1755 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 RGL2O15211 777 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 CAMTA2O94983 1202 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 SSFA2P28290 1259 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 NEXNQ0ZGT2 675 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 LINS1Q8NG48 757 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 SRCIN1Q9C0H9 1055 aa18.5■□□□□ 0.55
SMPDL3B-201ENST00000373888 SCN7AQ01118 1682 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 ALDH1L1O75891 902 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 ARXQ96QS3 562 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 ARHGEF1Q92888 912 aaKnown RBP18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 MYD88Q99836 296 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 NARFQ9UHQ1 456 aa18.49■□□□□ 0.55
SMPDL3B-201ENST00000373888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.48■□□□□ 0.55
SMPDL3B-201ENST00000373888 TCIRG1Q13488 830 aa18.48■□□□□ 0.55
SMPDL3B-201ENST00000373888 HLFQ16534 295 aa18.48■□□□□ 0.55
SMPDL3B-201ENST00000373888 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
SMPDL3B-201ENST00000373888 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
SMPDL3B-201ENST00000373888 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
SMPDL3B-201ENST00000373888 ZBTB7BO15156 539 aaPredicted RBP18.47■□□□□ 0.55
SMPDL3B-201ENST00000373888 PHF14O94880 888 aa18.47■□□□□ 0.55
SMPDL3B-201ENST00000373888 AAMPQ13685 434 aa18.47■□□□□ 0.55
SMPDL3B-201ENST00000373888 CLEC4GQ6UXB4 293 aa18.47■□□□□ 0.55
SMPDL3B-201ENST00000373888 TFCP2L1Q9NZI6 479 aa18.47■□□□□ 0.55
SMPDL3B-201ENST00000373888 DAXXQ9UER7 740 aaPredicted RBP18.47■□□□□ 0.55
SMPDL3B-201ENST00000373888 USP42Q9H9J4 1324 aaKnown RBP18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 NUP98P52948 1817 aa18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 ANKRD36CQ5JPF3 1778 aa18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 TRIM28Q13263 835 aaKnown RBP18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 CWF19L2Q2TBE0 894 aaKnown RBP18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 ILDR2Q71H61 639 aa18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 ISCA1Q9BUE6 129 aa18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 ANO8Q9HCE9 1232 aaPredicted RBP18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
SMPDL3B-201ENST00000373888 ZPR1O75312 459 aa18.45■□□□□ 0.54
SMPDL3B-201ENST00000373888 RFC4P35249 363 aa18.45■□□□□ 0.54
SMPDL3B-201ENST00000373888 FLAD1Q8NFF5 587 aa18.45■□□□□ 0.54
SMPDL3B-201ENST00000373888 ZNF652Q9Y2D9 606 aa18.45■□□□□ 0.54
SMPDL3B-201ENST00000373888 ATP5J2-PTCD1G3V325 749 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 USP44Q9H0E7 712 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 STK32BQ9NY57 414 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 QSER1Q2KHR3 1735 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 GCKRQ14397 625 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 USPL1Q5W0Q7 1092 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 ZNF34Q8IZ26 560 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 CCDC191Q8NCU4 936 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 MEIS3Q99687 375 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 SRP68Q9UHB9 627 aaKnown RBP18.44■□□□□ 0.54
SMPDL3B-201ENST00000373888 AFDNP55196 1824 aaKnown RBP18.43■□□□□ 0.54
SMPDL3B-201ENST00000373888 UTYO14607 1347 aa18.42■□□□□ 0.54
SMPDL3B-201ENST00000373888 PNPLA7Q6ZV29 1317 aa18.42■□□□□ 0.54
SMPDL3B-201ENST00000373888 GNAI3P08754 354 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms