RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SPON1Q9HCB6 807 aa23.85■■□□□ 1.41
CDX4-201ENST00000373514 NRXN2Q9P2S2 1712 aa23.85■■□□□ 1.41
CDX4-201ENST00000373514 AIMP1Q12904 312 aaKnown RBP23.84■■□□□ 1.41
CDX4-201ENST00000373514 CCDC30Q5VVM6 783 aa23.84■■□□□ 1.41
CDX4-201ENST00000373514 XAGE3Q8WTP9 111 aa23.84■■□□□ 1.41
CDX4-201ENST00000373514 PHAXQ9H814 394 aaKnown RBP23.84■■□□□ 1.41
CDX4-201ENST00000373514 ZBTB3Q9H5J0 574 aa23.84■■□□□ 1.41
CDX4-201ENST00000373514 COPS6Q7L5N1 327 aa23.83■■□□□ 1.41
CDX4-201ENST00000373514 MAP3K15Q6ZN16 1313 aa23.81■■□□□ 1.4
CDX4-201ENST00000373514 HLFQ16534 295 aa23.81■■□□□ 1.4
CDX4-201ENST00000373514 KIF6Q6ZMV9 814 aa23.81■■□□□ 1.4
CDX4-201ENST00000373514 STK31Q9BXU1 1019 aa23.81■■□□□ 1.4
CDX4-201ENST00000373514 KIF13BQ9NQT8 1826 aa23.81■■□□□ 1.4
CDX4-201ENST00000373514 G2E3Q7L622 706 aa23.8■■□□□ 1.4
CDX4-201ENST00000373514 HYPKQ9NX55 129 aa23.8■■□□□ 1.4
CDX4-201ENST00000373514 MMP10P09238 476 aa23.79■■□□□ 1.4
CDX4-201ENST00000373514 DDR1Q08345 913 aa23.79■■□□□ 1.4
CDX4-201ENST00000373514 TBC1D9BQ66K14 1250 aa23.79■■□□□ 1.4
CDX4-201ENST00000373514 BICDL1Q6ZP65 573 aa23.79■■□□□ 1.4
CDX4-201ENST00000373514 NLGN1Q8N2Q7 840 aa23.79■■□□□ 1.4
CDX4-201ENST00000373514 ANKRD31Q8N7Z5 1873 aa23.78■■□□□ 1.4
CDX4-201ENST00000373514 KIAA1551Q9HCM1 1747 aa23.78■■□□□ 1.4
CDX4-201ENST00000373514 SLC4A2P04920 1241 aa23.78■■□□□ 1.4
CDX4-201ENST00000373514 POLD1P28340 1107 aa23.78■■□□□ 1.4
CDX4-201ENST00000373514 NFIXQ14938 502 aa23.78■■□□□ 1.4
CDX4-201ENST00000373514 BCL2L13Q9BXK5 485 aa23.77■■□□□ 1.4
CDX4-201ENST00000373514 ATP10DQ9P241 1426 aa23.76■■□□□ 1.39
CDX4-201ENST00000373514 POLRMTO00411 1230 aaKnown RBP23.75■■□□□ 1.39
CDX4-201ENST00000373514 TM4SF1P30408 202 aa23.75■■□□□ 1.39
CDX4-201ENST00000373514 N4BP2Q86UW6 1770 aaPredicted RBP23.75■■□□□ 1.39
CDX4-201ENST00000373514 ERVV-1B6SEH8 477 aa23.74■■□□□ 1.39
CDX4-201ENST00000373514 CHMP4AQ9BY43 222 aa23.74■■□□□ 1.39
CDX4-201ENST00000373514 ZNF652Q9Y2D9 606 aa23.74■■□□□ 1.39
CDX4-201ENST00000373514 ADCY9O60503 1353 aa23.74■■□□□ 1.39
CDX4-201ENST00000373514 SSH1Q8WYL5 1049 aa23.74■■□□□ 1.39
CDX4-201ENST00000373514 FLIIQ13045 1269 aa23.73■■□□□ 1.39
CDX4-201ENST00000373514 CLEC4GQ6UXB4 293 aa23.73■■□□□ 1.39
CDX4-201ENST00000373514 GIGYF2Q6Y7W6 1299 aaKnown RBP23.73■■□□□ 1.39
CDX4-201ENST00000373514 PLBD2Q8NHP8 589 aa23.73■■□□□ 1.39
CDX4-201ENST00000373514 TNRC6CQ9HCJ0 1690 aaKnown RBP23.73■■□□□ 1.39
CDX4-201ENST00000373514 UBN2Q6ZU65 1347 aa23.73■■□□□ 1.39
CDX4-201ENST00000373514 COL11A2P13942 1736 aaPredicted RBP23.72■■□□□ 1.39
CDX4-201ENST00000373514 CARMIL3Q8ND23 1372 aa23.72■■□□□ 1.39
CDX4-201ENST00000373514 GPTP24298 496 aa23.72■■□□□ 1.39
CDX4-201ENST00000373514 ANKRD13DQ6ZTN6 518 aa23.72■■□□□ 1.39
CDX4-201ENST00000373514 MRPL50Q8N5N7 158 aaKnown RBP23.72■■□□□ 1.39
CDX4-201ENST00000373514 PPP1R1BQ9UD71 204 aaPredicted RBP23.72■■□□□ 1.39
CDX4-201ENST00000373514 NIP7Q9Y221 180 aaKnown RBP eCLIP23.72■■□□□ 1.39
CDX4-201ENST00000373514 PARP3Q9Y6F1 533 aa23.72■■□□□ 1.39
CDX4-201ENST00000373514 KLHL34Q8N239 644 aa23.71■■□□□ 1.39
CDX4-201ENST00000373514 ZNF428Q96B54 188 aa23.71■■□□□ 1.39
CDX4-201ENST00000373514 C10orf71Q711Q0 1435 aa23.71■■□□□ 1.39
CDX4-201ENST00000373514 LAMB2P55268 1798 aa23.7■■□□□ 1.39
CDX4-201ENST00000373514 SRCAPQ6ZRS2 3230 aa23.7■■□□□ 1.38
CDX4-201ENST00000373514 CT47B1P0C2W7 299 aaPredicted RBP23.7■■□□□ 1.38
CDX4-201ENST00000373514 FAM177BA6PVY3 158 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 RGL2O15211 777 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 RIC3Q7Z5B4 369 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 SMC4Q9NTJ3 1288 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 DDX60Q8IY21 1712 aaKnown RBP23.69■■□□□ 1.38
CDX4-201ENST00000373514 DLEC1Q9Y238 1755 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 SERPINB2P05120 415 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 FKBP5Q13451 457 aaPredicted RBP23.69■■□□□ 1.38
CDX4-201ENST00000373514 SETDB2Q96T68 719 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 MAP3K2Q9Y2U5 619 aa23.69■■□□□ 1.38
CDX4-201ENST00000373514 CACNA1SQ13698 1873 aa23.68■■□□□ 1.38
CDX4-201ENST00000373514 PI4KAP2A4QPH2 592 aa23.68■■□□□ 1.38
CDX4-201ENST00000373514 RARSP54136 660 aaKnown RBP23.68■■□□□ 1.38
CDX4-201ENST00000373514 ALDH1L2Q3SY69 923 aa23.68■■□□□ 1.38
CDX4-201ENST00000373514 ZNF34Q8IZ26 560 aa23.68■■□□□ 1.38
CDX4-201ENST00000373514 CCDC24Q8N4L8 307 aa23.68■■□□□ 1.38
CDX4-201ENST00000373514 PI4KAP1Q8N8J0 262 aa23.68■■□□□ 1.38
CDX4-201ENST00000373514 FHDC1Q9C0D6 1143 aaPredicted RBP23.68■■□□□ 1.38
CDX4-201ENST00000373514 BRCA1P38398 1863 aaKnown RBP23.67■■□□□ 1.38
CDX4-201ENST00000373514 DDX58O95786 925 aaKnown RBP23.67■■□□□ 1.38
CDX4-201ENST00000373514 ATP5J2-PTCD1G3V325 749 aa23.66■■□□□ 1.38
CDX4-201ENST00000373514 TCIRG1Q13488 830 aa23.66■■□□□ 1.38
CDX4-201ENST00000373514 KSR2Q6VAB6 950 aa23.66■■□□□ 1.38
CDX4-201ENST00000373514 MYD88Q99836 296 aa23.66■■□□□ 1.38
CDX4-201ENST00000373514 F6X3S4 739 aa23.65■■□□□ 1.38
CDX4-201ENST00000373514 SUSD4Q5VX71 490 aa23.64■■□□□ 1.38
CDX4-201ENST00000373514 PRR5LQ6MZQ0 368 aa23.64■■□□□ 1.38
CDX4-201ENST00000373514 ABCC12Q96J65 1359 aa23.64■■□□□ 1.37
CDX4-201ENST00000373514 BCAR3O75815 825 aa23.64■■□□□ 1.37
CDX4-201ENST00000373514 HSP90AB3PQ58FF7 597 aa23.64■■□□□ 1.37
CDX4-201ENST00000373514 NBPF5PQ86XG9 351 aaPredicted RBP23.64■■□□□ 1.37
CDX4-201ENST00000373514 CNBD1Q8NA66 436 aa23.63■■□□□ 1.37
CDX4-201ENST00000373514 NLGN2Q8NFZ4 835 aa23.63■■□□□ 1.37
CDX4-201ENST00000373514 ISCA1Q9BUE6 129 aa23.63■■□□□ 1.37
CDX4-201ENST00000373514 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
CDX4-201ENST00000373514 PXDNLA1KZ92 1463 aa23.63■■□□□ 1.37
CDX4-201ENST00000373514 NTSR2O95665 410 aa23.62■■□□□ 1.37
CDX4-201ENST00000373514 NLRP10Q86W26 655 aa23.62■■□□□ 1.37
CDX4-201ENST00000373514 NUTM1Q86Y26 1132 aa23.62■■□□□ 1.37
CDX4-201ENST00000373514 IBTKQ9P2D0 1353 aaPredicted RBP23.61■■□□□ 1.37
CDX4-201ENST00000373514 DNAAF4Q8WXU2 420 aa23.61■■□□□ 1.37
CDX4-201ENST00000373514 NPHP1O15259 732 aa23.6■■□□□ 1.37
CDX4-201ENST00000373514 CWF19L2Q2TBE0 894 aaKnown RBP23.6■■□□□ 1.37
CDX4-201ENST00000373514 MYH3P11055 1940 aa23.6■■□□□ 1.37
CDX4-201ENST00000373514 IGKV5-2P06315 115 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms