RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
RPRD1B-201ENST00000373433 PRIMPOLQ96LW4 560 aa13.43□□□□□ -0.26
RPRD1B-201ENST00000373433 DCCP43146 1447 aa13.43□□□□□ -0.26
RPRD1B-201ENST00000373433 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
RPRD1B-201ENST00000373433 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 PCDH11XQ9BZA7 1347 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 PCDH11YQ9BZA8 1340 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 WDR17Q8IZU2 1322 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 NEK4P51957 841 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 GORABQ5T7V8 394 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
RPRD1B-201ENST00000373433 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 GTPBP4Q9BZE4 634 aaKnown RBP13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 MAP2P11137 1827 aaKnown RBP13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 SNRPA1P09661 255 aaKnown RBP13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 KNDC1Q76NI1 1749 aa13.41□□□□□ -0.26
RPRD1B-201ENST00000373433 GNAI2P04899 355 aa13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 CHAF1AQ13111 956 aaPredicted RBP13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 PHKG2P15735 406 aa13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 PTPRCP08575 1304 aa13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 STARD3NLO95772 234 aa13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 ZNF790Q6PG37 636 aa13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 CARD10Q9BWT7 1032 aa13.4□□□□□ -0.26
RPRD1B-201ENST00000373433 PI4KAP2A4QPH2 592 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 PHF14O94880 888 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 PI4KAP1Q8N8J0 262 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 KCNQ3O43525 872 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 KIF20AO95235 890 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 ADCY5O95622 1261 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 U2AF2P26368 475 aaKnown RBP eCLIP13.39□□□□□ -0.275e-8■■■■□ 20
RPRD1B-201ENST00000373433 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 SMARCA5O60264 1052 aaPredicted RBP13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 ARHGAP45Q92619 1136 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 SLC52A2Q9HAB3 445 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 REC8O95072 547 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 SDSP20132 328 aa13.39□□□□□ -0.27
RPRD1B-201ENST00000373433 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 KIF6Q6ZMV9 814 aa13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 HYPKQ9NX55 129 aa13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 HCLS1P14317 486 aaPredicted RBP13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
RPRD1B-201ENST00000373433 USP32Q8NFA0 1604 aa13.37□□□□□ -0.27
RPRD1B-201ENST00000373433 G2E3Q7L622 706 aa13.37□□□□□ -0.27
RPRD1B-201ENST00000373433 SSH2Q76I76 1423 aa13.37□□□□□ -0.27
RPRD1B-201ENST00000373433 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
RPRD1B-201ENST00000373433 CGNQ9P2M7 1197 aaKnown RBP13.37□□□□□ -0.27
RPRD1B-201ENST00000373433 KIF20BQ96Q89 1820 aa13.37□□□□□ -0.27
RPRD1B-201ENST00000373433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.278e-7■■■□□ 16.1
RPRD1B-201ENST00000373433 USP21Q9UK80 565 aa13.37□□□□□ -0.27
RPRD1B-201ENST00000373433 ZNF853P0CG23 659 aa13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 SURF6O75683 361 aaKnown RBP13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 EIF4A1P60842 406 aaKnown RBP13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 CERKQ8TCT0 537 aa13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 MAP3K2Q9Y2U5 619 aa13.36□□□□□ -0.27
RPRD1B-201ENST00000373433 XRN1Q8IZH2 1706 aaKnown RBP13.35□□□□□ -0.27
RPRD1B-201ENST00000373433 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
RPRD1B-201ENST00000373433 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
RPRD1B-201ENST00000373433 CHD2O14647 1828 aaKnown RBP13.35□□□□□ -0.27
RPRD1B-201ENST00000373433 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
RPRD1B-201ENST00000373433 ERC2O15083 957 aa13.35□□□□□ -0.27
RPRD1B-201ENST00000373433 ZBTB3Q9H5J0 574 aa13.35□□□□□ -0.27
RPRD1B-201ENST00000373433 PDE4CQ08493 712 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 MYD88Q99836 296 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 BRD1O95696 1058 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 MEIS3Q99687 375 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 CYP27B1O15528 508 aa13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 G3BP1Q13283 466 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPRD1B-201ENST00000373433 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.27
RPRD1B-201ENST00000373433 KDRP35968 1356 aa13.33□□□□□ -0.28
RPRD1B-201ENST00000373433 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
RPRD1B-201ENST00000373433 RPAP2Q8IXW5 612 aaPredicted RBP13.33□□□□□ -0.28
RPRD1B-201ENST00000373433 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
RPRD1B-201ENST00000373433 UPF3BQ9BZI7 483 aaKnown RBP13.33□□□□□ -0.28
RPRD1B-201ENST00000373433 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms