RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 THUMPD2Q9BTF0 503 aaKnown RBP11.45□□□□□ -0.58
TRERF1-204ENST00000372922 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
TRERF1-204ENST00000372922 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 CCDC8Q9H0W5 538 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-204ENST00000372922 STXBP4Q6ZWJ1 553 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 SMARCA5O60264 1052 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-204ENST00000372922 GSTO1P78417 241 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 AMPD3Q01432 767 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 HMGXB3Q12766 1538 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 GPTP24298 496 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 CALML4Q96GE6 196 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 TTC21AQ8NDW8 1320 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 EVI5LQ96CN4 794 aa11.44□□□□□ -0.58
TRERF1-204ENST00000372922 SRRTQ9BXP5 876 aaKnown RBP11.44□□□□□ -0.58
TRERF1-204ENST00000372922 ZSCAN12O43309 604 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 ZNF622Q969S3 477 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRERF1-204ENST00000372922 VGLL3A8MV65 326 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 GBP3Q9H0R5 595 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 CTAGE5O15320 804 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 CAMK4Q16566 473 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
TRERF1-204ENST00000372922 KAT14Q9H8E8 782 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 NAIPQ13075 1403 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 KIF2AO00139 706 aaPredicted RBP11.43□□□□□ -0.58
TRERF1-204ENST00000372922 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
TRERF1-204ENST00000372922 LDHAL6AQ6ZMR3 332 aa11.42□□□□□ -0.58
TRERF1-204ENST00000372922 ZBTB3Q9H5J0 574 aa11.42□□□□□ -0.58
TRERF1-204ENST00000372922 TCP11L1Q9NUJ3 509 aa11.42□□□□□ -0.58
TRERF1-204ENST00000372922 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
TRERF1-204ENST00000372922 CCDC82Q8N4S0 544 aa11.42□□□□□ -0.58
TRERF1-204ENST00000372922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRERF1-204ENST00000372922 KIF5CO60282 957 aa11.42□□□□□ -0.58
TRERF1-204ENST00000372922 SFPQP23246 707 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRERF1-204ENST00000372922 SSH1Q8WYL5 1049 aa11.42□□□□□ -0.58
TRERF1-204ENST00000372922 NKTRP30414 1462 aaKnown RBP11.42□□□□□ -0.58
TRERF1-204ENST00000372922 USO1O60763 962 aaKnown RBP11.41□□□□□ -0.58
TRERF1-204ENST00000372922 FERMT3Q86UX7 667 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 MCM3P25205 808 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 CNNM3Q8NE01 707 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 CCDC183Q5T5S1 534 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 HOOK3Q86VS8 718 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 MPNDQ8N594 471 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 LRRC27Q9C0I9 530 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 LIG1P18858 919 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 NSD2O96028 1365 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 F6X3S4 739 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 TMEM67Q5HYA8 995 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 CRNKL1Q9BZJ0 848 aaKnown RBP11.41□□□□□ -0.58
TRERF1-204ENST00000372922 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
TRERF1-204ENST00000372922 CUL7Q14999 1698 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 UQCRFS1P1P0C7P4 283 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
TRERF1-204ENST00000372922 CASQ1P31415 396 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 RARSP54136 660 aaKnown RBP11.4□□□□□ -0.58
TRERF1-204ENST00000372922 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 MFSD6Q6ZSS7 791 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 MCM4P33991 863 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 TRAF1Q13077 416 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 CRACR2AQ9BSW2 395 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 LIMCH1Q9UPQ0 1083 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 GOLGA6L10A0A0M3HER8 536 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 SNRPA1P09661 255 aaKnown RBP11.4□□□□□ -0.58
TRERF1-204ENST00000372922 FLIIQ13045 1269 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-204ENST00000372922 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 GUCY1B3Q02153 619 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 ZGPATQ8N5A5 531 aaKnown RBP11.4□□□□□ -0.58
TRERF1-204ENST00000372922 HDAC9Q9UKV0 1011 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 PTPN23Q9H3S7 1636 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 GSTTP1A0A1W2PQM5 241 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 CTNNA2P26232 953 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 CTNNBL1Q8WYA6 563 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-204ENST00000372922 UBXN4Q92575 508 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRERF1-204ENST00000372922 SAMM50Q9Y512 469 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 MSH6P52701 1360 aa11.4□□□□□ -0.58
TRERF1-204ENST00000372922 GOLIM4O00461 696 aa11.4□□□□□ -0.59
TRERF1-204ENST00000372922 YEATS4O95619 227 aa11.4□□□□□ -0.59
TRERF1-204ENST00000372922 FAM114A1Q8IWE2 563 aa11.4□□□□□ -0.59
TRERF1-204ENST00000372922 PIK3R4Q99570 1358 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 STAMBPO95630 424 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 LUZP1Q86V48 1076 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 SYCP3Q8IZU3 236 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-204ENST00000372922 ANKRD24Q8TF21 1146 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 ECHDC1Q9NTX5 307 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 ARID4AP29374 1257 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-204ENST00000372922 MAP2K1Q02750 393 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms