RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 SPC24Q8NBT2 197 aa10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 PUS7Q96PZ0 661 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 MYD88Q99836 296 aa10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 LRRC27Q9C0I9 530 aa10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 TTC12Q9H892 705 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 BRDTQ58F21 947 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 SETDB2Q96T68 719 aa10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 IKBKGQ9Y6K9 419 aa10.61□□□□□ -0.71
SPTAN1-202ENST00000372731 NDC80O14777 642 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 TNNI2P48788 182 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 UBE4AQ14139 1066 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 DDX12PQ92771 950 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 ARHGEF11O15085 1522 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 ERMNQ8TAM6 284 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 IFFO1Q0D2I5 559 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 C8orf37Q96NL8 207 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 SNX16P57768 344 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 BMS1Q14692 1282 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 NUDT16Q96DE0 195 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 CCDC172P0C7W6 258 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 TCP11L1Q9NUJ3 509 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 DAPK1P53355 1430 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 NFE2L2Q16236 605 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 ARHGAP29Q52LW3 1261 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 FAM43AQ8N2R8 423 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 JAKMIP1Q96N16 626 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 KIAA1107Q9UPP5 1409 aa10.6□□□□□ -0.71
SPTAN1-202ENST00000372731 ATAD2Q6PL18 1390 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 NSD3Q9BZ95 1437 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 LUZP1Q86V48 1076 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 TBC1D5Q92609 795 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 FSD2A1L4K1 749 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 ZNF213O14771 459 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 TBCAO75347 108 aaKnown RBP10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 CCDC175P0C221 793 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 CFAP57Q96MR6 1250 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 UPF3BQ9BZI7 483 aaKnown RBP10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 CCDC152Q4G0S7 254 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 PPP1R14CQ8TAE6 165 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 RAB11FIP3O75154 756 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 FBLN1P23142 703 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 NME9Q86XW9 330 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 CRNKL1Q9BZJ0 848 aaKnown RBP10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 VEZTQ9HBM0 779 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 EHBP1L1Q8N3D4 1523 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 TOPBP1Q92547 1522 aa10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
SPTAN1-202ENST00000372731 CCDC66A2RUB6 948 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 IMPG2Q9BZV3 1241 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 NYXQ9GZU5 481 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 VAT1LQ9HCJ6 419 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 TSPY2A6NKD2 308 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 MCM3P25205 808 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 JARID2Q92833 1246 aaPredicted RBP10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 NCAPD3P42695 1498 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 GAS8O95995 478 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 TNNT1P13805 278 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 USO1O60763 962 aaKnown RBP10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 HMGB1P09429 215 aaKnown RBP10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 TCERG1LQ5VWI1 586 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 PYM1Q9BRP8 204 aaKnown RBP10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 RPGRIP1LQ68CZ1 1315 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 CCDC14Q49A88 953 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 FAM114A1Q8IWE2 563 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 HYPKQ9NX55 129 aa10.58□□□□□ -0.72
SPTAN1-202ENST00000372731 HECW1Q76N89 1606 aa10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 MTERF4Q7Z6M4 381 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 TFCP2L1Q9NZI6 479 aa10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 IFT140Q96RY7 1462 aa10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 WDR97A6NE52 1622 aa10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-202ENST00000372731 IFIT3O14879 490 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 SMARCC1Q92922 1105 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 TSPY3P0CV98 308 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 TSPY8P0CW00 308 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 CCDC40Q4G0X9 1142 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 TDRD12Q587J7 1177 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 PLVAPQ9BX97 442 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 F6X3S4 739 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 GPTP24298 496 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 CADPS2Q86UW7 1296 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 CFAP100Q494V2 611 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 DHX37Q8IY37 1157 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 MSANTD4Q8NCY6 345 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 PICK1Q9NRD5 415 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 CASTP20810 708 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 CEP135Q66GS9 1140 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 TMEM57Q8N5G2 664 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 EXOC6BQ9Y2D4 811 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 MVPQ14764 893 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 EP400NLQ6ZTU2 488 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms