RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 ERLIN2O94905 339 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 CCDC83Q8IWF9 413 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 PI4KAP2A4QPH2 592 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 ANXA1P04083 346 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 MRE11P49959 708 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 C20orf194Q5TEA3 1177 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 PI4KAP1Q8N8J0 262 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 TTF1Q15361 905 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-202ENST00000372216 ZNF354CQ86Y25 554 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 PPFIBP1Q86W92 1011 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 CHPF2Q9P2E5 772 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 GOLIM4O00461 696 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 DESP17661 470 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 SLC39A6Q13433 755 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 CUL5Q93034 780 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 BACH2Q9BYV9 841 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 ABCC1P33527 1531 aa11.42□□□□□ -0.58
COL4A6-202ENST00000372216 CTCFLQ8NI51 663 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-202ENST00000372216 LRRC59Q96AG4 307 aaKnown RBP11.41□□□□□ -0.58
COL4A6-202ENST00000372216 ZMYM3Q14202 1370 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 WDR62O43379 1518 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 TRIM27P14373 513 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-202ENST00000372216 ANKRD18AQ8IVF6 992 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 VAT1LQ9HCJ6 419 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 TRIM21P19474 475 aaKnown RBP11.41□□□□□ -0.58
COL4A6-202ENST00000372216 IQCA1Q86XH1 822 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 MMRN2Q9H8L6 949 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 AKAP4Q5JQC9 854 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 CTNNBL1Q8WYA6 563 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-202ENST00000372216 RNF41Q9H4P4 317 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-202ENST00000372216 PBRM1Q86U86 1689 aa11.41□□□□□ -0.58
COL4A6-202ENST00000372216 F8W031 263 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-202ENST00000372216 IL2RBP14784 551 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 MACROD2A1Z1Q3 448 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 C19orf44Q9H6X5 657 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 CCP110O43303 1012 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-202ENST00000372216 EVI5LQ96CN4 794 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 CCDC113Q9H0I3 377 aa11.4□□□□□ -0.58
COL4A6-202ENST00000372216 RBM26Q5T8P6 1007 aaKnown RBP11.4□□□□□ -0.58
COL4A6-202ENST00000372216 SPTY2D1Q68D10 685 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-202ENST00000372216 EIF2AK4Q9P2K8 1649 aaKnown RBP11.4□□□□□ -0.58
COL4A6-202ENST00000372216 RALGAPBQ86X10 1494 aa11.4□□□□□ -0.59
COL4A6-202ENST00000372216 CCDC196A0A1B0GTZ2 297 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 SSRP1Q08945 709 aaKnown RBP11.39□□□□□ -0.59
COL4A6-202ENST00000372216 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
COL4A6-202ENST00000372216 LDHCP07864 332 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 CCDC112Q8NEF3 446 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 XAGE3Q8WTP9 111 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 FEZ1Q99689 392 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 GOLGA6L10A6NI86 522 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 BAG3O95817 575 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 HMGB1P09429 215 aaKnown RBP11.39□□□□□ -0.59
COL4A6-202ENST00000372216 CCDC144CPQ8IYA2 1237 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 GOLGA8AA7E2F4 631 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 GOLGA8BA8MQT2 603 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 EIF4A2Q14240 407 aaKnown RBP11.39□□□□□ -0.59
COL4A6-202ENST00000372216 CATIPQ7Z7H3 387 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 ABCC2Q92887 1545 aa11.39□□□□□ -0.59
COL4A6-202ENST00000372216 MYO1BO43795 1136 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 PTPRKQ15262 1439 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 CBFA2T2O43439 604 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 TERF1P54274 439 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 MAP3K9P80192 1104 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 EHMT1Q9H9B1 1298 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 GSTO1P78417 241 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 GUCY1B3Q02153 619 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 PUF60Q9UHX1 559 aaKnown RBP11.38□□□□□ -0.59
COL4A6-202ENST00000372216 IL16Q14005 1332 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 HLA-DOAP06340 250 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 NUP62CLQ9H1M0 184 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 NIP7Q9Y221 180 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A6-202ENST00000372216 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
COL4A6-202ENST00000372216 NUP160Q12769 1436 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 PPFIA3O75145 1194 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 MRPS9P82933 396 aaKnown RBP11.37□□□□□ -0.59
COL4A6-202ENST00000372216 RBM10P98175 930 aaKnown RBP11.37□□□□□ -0.59
COL4A6-202ENST00000372216 PRAG1Q86YV5 1406 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 CABP5Q9NP86 173 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 SERPINA10Q9UK55 444 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 NPATQ14207 1427 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 NLRP5P59047 1200 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 CAMK4Q16566 473 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
COL4A6-202ENST00000372216 UPF3BQ9BZI7 483 aaKnown RBP11.37□□□□□ -0.59
COL4A6-202ENST00000372216 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
COL4A6-202ENST00000372216 LUC7LQ9NQ29 371 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms