RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 GPTP24298 496 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 JAKMIP3Q5VZ66 844 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 AKAP2Q9Y2D5 859 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 KCNA6P17658 529 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 ABCF2Q9UG63 623 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 NOL3O60936 208 aaKnown RBP16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 PDE3AQ14432 1141 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 DACH1Q9UI36 760 aa16.32■□□□□ 0.2
RAPGEF1-202ENST00000372190 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-202ENST00000372190 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
RAPGEF1-202ENST00000372190 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
RAPGEF1-202ENST00000372190 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
RAPGEF1-202ENST00000372190 CCDC6Q16204 474 aa16.31■□□□□ 0.2
RAPGEF1-202ENST00000372190 PPP1R42Q7Z4L9 355 aa16.31■□□□□ 0.2
RAPGEF1-202ENST00000372190 KIF5BP33176 963 aa16.31■□□□□ 0.2
RAPGEF1-202ENST00000372190 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 POLD1P28340 1107 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 KIF18AQ8NI77 898 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 CCDC113Q9H0I3 377 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 C6orf229H3BNL8 230 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 IL2RBP14784 551 aa16.3■□□□□ 0.2
RAPGEF1-202ENST00000372190 NEK4P51957 841 aa16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 ZMAT2Q96NC0 199 aaKnown RBP16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 TAF4BQ92750 862 aa16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 GOLIM4O00461 696 aa16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 FEZ2Q9UHY8 353 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 BRD2P25440 801 aaKnown RBP16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 CCDC69A6NI79 296 aa16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 RPRD2Q5VT52 1461 aaKnown RBP16.29■□□□□ 0.2
RAPGEF1-202ENST00000372190 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 KRT222Q8N1A0 295 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 NBPF5PQ86XG9 351 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 DISP1Q96F81 1524 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 SLC5A1P13866 664 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 USP5P45974 858 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 IFFO1Q0D2I5 559 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
RAPGEF1-202ENST00000372190 MICALL1Q8N3F8 863 aa16.27■□□□□ 0.2
RAPGEF1-202ENST00000372190 ATP7AQ04656 1500 aa16.27■□□□□ 0.2
RAPGEF1-202ENST00000372190 ABCC11Q96J66 1382 aa16.27■□□□□ 0.2
RAPGEF1-202ENST00000372190 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.19
RAPGEF1-202ENST00000372190 MSL1Q68DK7 614 aa16.27■□□□□ 0.19
RAPGEF1-202ENST00000372190 NAA25Q14CX7 972 aa16.27■□□□□ 0.19
RAPGEF1-202ENST00000372190 K7ELQ4 463 aaPredicted RBP16.27■□□□□ 0.19
RAPGEF1-202ENST00000372190 AIDAQ96BJ3 306 aa16.27■□□□□ 0.19
RAPGEF1-202ENST00000372190 BTG4Q9NY30 223 aa16.27■□□□□ 0.19
RAPGEF1-202ENST00000372190 TFCP2L1Q9NZI6 479 aa16.27■□□□□ 0.19
RAPGEF1-202ENST00000372190 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 CEP57Q86XR8 500 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 BANK1Q8NDB2 785 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 CFAP74Q9C0B2 1584 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 UBE4AQ14139 1066 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 TRPM2O94759 1503 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 ARHGAP29Q52LW3 1261 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
RAPGEF1-202ENST00000372190 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 ZWINTO95229 277 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 PDCP20941 246 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 CASQ1P31415 396 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 ZNF396Q96N95 335 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 SOGA3Q5TF21 947 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 RFC1P35251 1148 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 CEP120Q8N960 986 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 NEO1Q92859 1461 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 SLF2Q8IX21 1173 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 IL1RAPL2Q9NP60 686 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 DISP3Q9P2K9 1392 aa16.25■□□□□ 0.19
RAPGEF1-202ENST00000372190 A0A1B0GUL7 405 aa16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 SETDB2Q96T68 719 aa16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 FIBPO43427 364 aa16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 MPNDQ8N594 471 aa16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 RSPH14Q9UHP6 348 aa16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 UBAC1Q9BSL1 405 aa16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 CWC25Q9NXE8 425 aaPredicted RBP16.24■□□□□ 0.19
RAPGEF1-202ENST00000372190 ABCC1P33527 1531 aa16.23■□□□□ 0.19
RAPGEF1-202ENST00000372190 ATP2B1P20020 1258 aa16.23■□□□□ 0.19
RAPGEF1-202ENST00000372190 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
RAPGEF1-202ENST00000372190 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
RAPGEF1-202ENST00000372190 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
RAPGEF1-202ENST00000372190 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF1-202ENST00000372190 ZFP91Q96JP5 570 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF1-202ENST00000372190 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms