RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SOS1Q07889 1333 aaPredicted RBP17.69■□□□□ 0.42
LDB3-204ENST00000372066 RFC4P35249 363 aa17.69■□□□□ 0.42
LDB3-204ENST00000372066 PTCD1O75127 700 aaKnown RBP17.68■□□□□ 0.42
LDB3-204ENST00000372066 RPS6KA4O75676 772 aa17.68■□□□□ 0.42
LDB3-204ENST00000372066 ADRA2BP18089 450 aa17.68■□□□□ 0.42
LDB3-204ENST00000372066 UBR3Q6ZT12 1888 aa17.68■□□□□ 0.42
LDB3-204ENST00000372066 TGFB2P61812 414 aa17.67■□□□□ 0.42
LDB3-204ENST00000372066 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
LDB3-204ENST00000372066 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
LDB3-204ENST00000372066 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
LDB3-204ENST00000372066 N4BP2Q86UW6 1770 aaPredicted RBP17.67■□□□□ 0.42
LDB3-204ENST00000372066 PTPRCP08575 1304 aa17.67■□□□□ 0.42
LDB3-204ENST00000372066 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
LDB3-204ENST00000372066 A0A0G2JLW4 131 aa17.66■□□□□ 0.42
LDB3-204ENST00000372066 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
LDB3-204ENST00000372066 GYS1P13807 737 aa17.66■□□□□ 0.42
LDB3-204ENST00000372066 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
LDB3-204ENST00000372066 CCDC87Q9NVE4 849 aa17.66■□□□□ 0.42
LDB3-204ENST00000372066 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
LDB3-204ENST00000372066 ADCY9O60503 1353 aa17.65■□□□□ 0.42
LDB3-204ENST00000372066 MCM10Q7L590 875 aa17.65■□□□□ 0.42
LDB3-204ENST00000372066 BCS1LQ9Y276 419 aa17.65■□□□□ 0.42
LDB3-204ENST00000372066 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
LDB3-204ENST00000372066 GCC1Q96CN9 775 aa17.64■□□□□ 0.41
LDB3-204ENST00000372066 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
LDB3-204ENST00000372066 GNAT3A8MTJ3 354 aa17.62■□□□□ 0.41
LDB3-204ENST00000372066 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
LDB3-204ENST00000372066 DPEP1P16444 411 aa17.62■□□□□ 0.41
LDB3-204ENST00000372066 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
LDB3-204ENST00000372066 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
LDB3-204ENST00000372066 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
LDB3-204ENST00000372066 PXDNLA1KZ92 1463 aa17.61■□□□□ 0.41
LDB3-204ENST00000372066 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
LDB3-204ENST00000372066 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
LDB3-204ENST00000372066 KDM3BQ7LBC6 1761 aa17.6■□□□□ 0.41
LDB3-204ENST00000372066 NUCB1Q02818 461 aa17.6■□□□□ 0.41
LDB3-204ENST00000372066 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
LDB3-204ENST00000372066 HSPA6P17066 643 aa17.59■□□□□ 0.41
LDB3-204ENST00000372066 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
LDB3-204ENST00000372066 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
LDB3-204ENST00000372066 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.41
LDB3-204ENST00000372066 C10orf71Q711Q0 1435 aa17.58■□□□□ 0.4
LDB3-204ENST00000372066 KIF3CO14782 793 aa17.57■□□□□ 0.4
LDB3-204ENST00000372066 INTS5Q6P9B9 1019 aaKnown RBP17.57■□□□□ 0.4
LDB3-204ENST00000372066 SLC52A2Q9HAB3 445 aa17.57■□□□□ 0.4
LDB3-204ENST00000372066 DNAJC10Q8IXB1 793 aa17.57■□□□□ 0.4
LDB3-204ENST00000372066 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
LDB3-204ENST00000372066 USP42Q9H9J4 1324 aaKnown RBP17.57■□□□□ 0.4
LDB3-204ENST00000372066 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
LDB3-204ENST00000372066 KCNA3P22001 575 aa17.56■□□□□ 0.4
LDB3-204ENST00000372066 CHD1LQ86WJ1 897 aa17.56■□□□□ 0.4
LDB3-204ENST00000372066 PIM2Q9P1W9 311 aa17.56■□□□□ 0.4
LDB3-204ENST00000372066 ZPR1O75312 459 aa17.55■□□□□ 0.4
LDB3-204ENST00000372066 DDR1Q08345 913 aa17.55■□□□□ 0.4
LDB3-204ENST00000372066 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
LDB3-204ENST00000372066 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
LDB3-204ENST00000372066 STK31Q9BXU1 1019 aa17.54■□□□□ 0.4
LDB3-204ENST00000372066 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
LDB3-204ENST00000372066 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
LDB3-204ENST00000372066 DALRD3Q5D0E6 543 aaKnown RBP17.53■□□□□ 0.4
LDB3-204ENST00000372066 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
LDB3-204ENST00000372066 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
LDB3-204ENST00000372066 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
LDB3-204ENST00000372066 TM4SF1P30408 202 aa17.53■□□□□ 0.4
LDB3-204ENST00000372066 CCT4P50991 539 aaKnown RBP17.53■□□□□ 0.4
LDB3-204ENST00000372066 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
LDB3-204ENST00000372066 C9orf131Q5VYM1 1079 aa17.53■□□□□ 0.4
LDB3-204ENST00000372066 USPL1Q5W0Q7 1092 aa17.53■□□□□ 0.4
LDB3-204ENST00000372066 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.4
LDB3-204ENST00000372066 CEP350Q5VT06 3117 aa17.52■□□□□ 0.4
LDB3-204ENST00000372066 POLRMTO00411 1230 aaKnown RBP17.52■□□□□ 0.39
LDB3-204ENST00000372066 EIF5BO60841 1220 aaKnown RBP17.52■□□□□ 0.39
LDB3-204ENST00000372066 CHRNA5P30532 468 aa17.52■□□□□ 0.39
LDB3-204ENST00000372066 BECN1Q14457 450 aa17.52■□□□□ 0.39
LDB3-204ENST00000372066 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.39
LDB3-204ENST00000372066 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
LDB3-204ENST00000372066 HOXB7P09629 217 aa17.51■□□□□ 0.39
LDB3-204ENST00000372066 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
LDB3-204ENST00000372066 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
LDB3-204ENST00000372066 C4AP0C0L4 1744 aa17.51■□□□□ 0.39
LDB3-204ENST00000372066 MYH14Q7Z406 1995 aaKnown RBP17.5■□□□□ 0.39
LDB3-204ENST00000372066 TOMM70O94826 608 aa17.5■□□□□ 0.39
LDB3-204ENST00000372066 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
LDB3-204ENST00000372066 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
LDB3-204ENST00000372066 NMRK2Q9NPI5 230 aa17.5■□□□□ 0.39
LDB3-204ENST00000372066 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
LDB3-204ENST00000372066 SIRT2Q8IXJ6 389 aa17.49■□□□□ 0.39
LDB3-204ENST00000372066 SEC24BO95487 1268 aa17.49■□□□□ 0.39
LDB3-204ENST00000372066 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
LDB3-204ENST00000372066 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
LDB3-204ENST00000372066 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
LDB3-204ENST00000372066 C1orf115Q9H7X2 142 aa17.49■□□□□ 0.39
LDB3-204ENST00000372066 NARFQ9UHQ1 456 aa17.49■□□□□ 0.39
LDB3-204ENST00000372066 ZBTB1Q9Y2K1 713 aa17.49■□□□□ 0.39
LDB3-204ENST00000372066 KIF13BQ9NQT8 1826 aa17.48■□□□□ 0.39
LDB3-204ENST00000372066 NFIXQ14938 502 aa17.48■□□□□ 0.39
LDB3-204ENST00000372066 ANKRD45Q5TZF3 282 aa17.48■□□□□ 0.39
LDB3-204ENST00000372066 VSIG10Q8N0Z9 540 aa17.48■□□□□ 0.39
LDB3-204ENST00000372066 IFFO2Q5TF58 517 aa17.47■□□□□ 0.39
LDB3-204ENST00000372066 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms